Detail information of GWHGAAZE000469


Functional Annotation

DatabaseOrthologsE valueAnnotation
NrKHG16505.10Galacturonosyltransferase 8 -like protein [Gossypium arboreum]
Swissprottr|Q9LSG3|GAUT8_ARATH0Galacturonosyltransferase 8
trEMBLtr|F6HCQ2|F6HCQ2_VITVI0Putative uncharacterized protein {ECO:0000313|EMBL:CCB49997.1}
TAIR10AT3G25140.10Nucleotide-diphospho-sugar transferases superfamily protein

Location And Transcript Sequence (JBrowse)

ScaffoldTypeStartEndStrand
GWHAAZE00000001gene89541688956985+
GWHAAZE00000001mRNA89541688956985+
GWHAAZE00000001exon89541688954350+
GWHAAZE00000001exon89550638956310+
GWHAAZE00000001exon89567108956985+
GWHAAZE00000001CDS89541688954350+
GWHAAZE00000001CDS89550638956310+
GWHAAZE00000001CDS89567108956985+
Transcript Sequence

Network for GWHGAAZE000469

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist


Functional Module

Module IDFunction Annotation


Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF01501.21Glyco_transf_82255421.10E-92
Protein Sequence

Gene family

Gene familysubfamily
----

KEGG pathway

KO Enzyme pathway mapID
K13648GAUT Metabolic pathways map01100
Amino sugar and nucleotide sugar metabolismmap00520

Gene Ontology

GO term OntologyName
GO:0016757molecular_functiontransferase activity, transferring glycosyl groups

Expression pattern


Expression pattern detail

SRPSampleDescriptionTPM
SRP075780SRR3591705youngest leaf46.908
SRR3591706second leaf27.864
SRR3591707mature leaf22.306
SRR3591708Shoot apex23.454
SRR3591709Stem33.880
SRR3591710White floral bud46.926
SRR3591711White flower32.674
SRR3591712Green floral bud49.477
SRR3591713Yellow flower36.642
SRP173429 SRR8316895Juvenile bud stage 23.817
SRR8316896Juvenile bud stage 31.932
SRR8316897Juvenile bud stage 16.042
SRR8316894Third green stage 15.730
SRR8316900Third green stage 61.493
SRR8316901Third green stage 50.549
SRR8316898Complete white stage 33.151
SRR8316899Complete white stage 86.435
SRR8316903Complete white stage 52.894
SRR8316902Silver flowering stage17.349
SRR8316904Silver flowering stage33.267
SRR8316905Silver flowering stage13.819
SRR8316906Gold flowering stage 33.784
SRR8316907Gold flowering stage 35.467
SRR8316908Gold flowering stage 34.470
SRP132670SRR6706286Control70.480
SRR6706287Light intensity 50%70.391
SRR6706288Light intensity 20%75.448
CNP0000432CNS0095592Slightly white alabastrum(diploid) 132.662
CNS0095593Slightly white alabastrum(diploid) 231.557
CNS0095594Slightly white alabastrum(diploid) 330.772
CNS0095595Whole white alabastrum(diploid) 237.928
CNS0095596Whole white alabastrum(diploid) 344.574
CNS0095597Whole white alabastrum(diploid) 436.528
CNS0095598Silvery flower (diploied) 130.145
CNS0095599Silvery flower (diploied) 223.013
CNS0095600Silvery flower (diploied) 362.250
CNS0095601Golden flower (diploid) 123.899
CNS0095602Golden flower (diploid) 262.175
CNS0095603Golden flower (diploid) 360.515
CNS0095604Slightly white alabastrum(tetraploid) 140.645
CNS0095605Slightly white alabastrum(tetraploid) 236.100
CNS0095606Slightly white alabastrum(tetraploid) 370.579
CNS0095607Whole white alabastrum(tetraploid) 127.508
CNS0095608Whole white alabastrum(tetraploid) 227.548
CNS0095609Whole white alabastrum(tetraploid) 367.290
CNS0095610Silvery flower (tetraploid) 1102.242
CNS0095611Silvery flower (tetraploid) 275.844
CNS0095612Silvery flower (tetraploid) 357.064
CNS0095613Golden flower (tetraploid) 133.008
CNS0095614Golden flower (tetraploid) 277.100
CNS0095615Golden flower (tetraploid) 3104.819
CRA001975CRR073297Stem 144.928
CRR073298Stem 245.774
CRR073299Stem 353.757
CRR073300Leaf 181.837
CRR073301Leaf 268.225
CRR073302Leaf 374.290
CRR073303Juvenile bud 199.286
CRR073304Juvenile bud 2109.329
CRR073305Juvenile bud 3122.623
CRR073306Third green 148.833
CRR073307Third green 256.746
CRR073308Third green 354.645
CRR073309Second white 133.446
CRR073310Second white 220.330
CRR073311Second white 320.914
CRR073312Silver flowering 120.234
CRR073313Silver flowering 221.231
CRR073314Silver flowering 314.282
CRR073315Gold flowering 148.012
CRR073316Gold flowering 262.411
CRR073317Gold flowering 357.411
CRR073318Tawny withering 150.302
CRR073319Tawny withering 236.836
CRR073320Tawny withering 343.169