Detail information of GWHGAAZE000652


Functional Annotation

DatabaseOrthologsE valueAnnotation
NrXP_007016898.11.43361E-09Mitogen-activated protein kinase kinase kinase 13, putative [Theobroma cacao]
trEMBLtr|A0A061GYZ1|A0A061GYZ1_THECC5E-10Mitogen-activated protein kinase kinase kinase 13, putative {ECO:0000313|EMBL:EOY34517.1}
TAIR10AT1G07150.10.008mitogen-activated protein kinase kinase kinase 13

Location And Transcript Sequence (JBrowse)

ScaffoldTypeStartEndStrand
GWHAAZE00000001gene1336853313369216-
GWHAAZE00000001mRNA1336853313369216-
GWHAAZE00000001exon1336853313369216-
GWHAAZE00000001CDS1336853313369216-
Transcript Sequence

Network for GWHGAAZE000652

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist


Functional Module

Module IDFunction Annotation
CFinderModule0026


Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
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Protein Sequence

Gene family

Gene familysubfamily
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KEGG pathway

KO Enzyme pathway mapID
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Gene Ontology

GO term OntologyName

Expression pattern


Expression pattern detail

SRPSampleDescriptionTPM
SRP075780SRR3591705youngest leaf4.544
SRR3591706second leaf0.354
SRR3591707mature leaf0.152
SRR3591708Shoot apex1.880
SRR3591709Stem7.683
SRR3591710White floral bud10.103
SRR3591711White flower21.664
SRR3591712Green floral bud0.790
SRR3591713Yellow flower40.965
SRP173429 SRR8316895Juvenile bud stage 12.199
SRR8316896Juvenile bud stage 8.416
SRR8316897Juvenile bud stage 5.718
SRR8316894Third green stage 1.311
SRR8316900Third green stage 0.440
SRR8316901Third green stage 2.512
SRR8316898Complete white stage 2.799
SRR8316899Complete white stage 2.684
SRR8316903Complete white stage 5.105
SRR8316902Silver flowering stage9.192
SRR8316904Silver flowering stage7.671
SRR8316905Silver flowering stage6.558
SRR8316906Gold flowering stage 27.698
SRR8316907Gold flowering stage 32.397
SRR8316908Gold flowering stage 20.824
SRP132670SRR6706286Control1.070
SRR6706287Light intensity 50%1.244
SRR6706288Light intensity 20%0.520
CNP0000432CNS0095592Slightly white alabastrum(diploid) 14.246
CNS0095593Slightly white alabastrum(diploid) 214.148
CNS0095594Slightly white alabastrum(diploid) 39.128
CNS0095595Whole white alabastrum(diploid) 25.595
CNS0095596Whole white alabastrum(diploid) 30.201
CNS0095597Whole white alabastrum(diploid) 43.115
CNS0095598Silvery flower (diploied) 124.162
CNS0095599Silvery flower (diploied) 234.047
CNS0095600Silvery flower (diploied) 39.973
CNS0095601Golden flower (diploid) 143.446
CNS0095602Golden flower (diploid) 215.582
CNS0095603Golden flower (diploid) 314.156
CNS0095604Slightly white alabastrum(tetraploid) 10.125
CNS0095605Slightly white alabastrum(tetraploid) 20.000
CNS0095606Slightly white alabastrum(tetraploid) 30.255
CNS0095607Whole white alabastrum(tetraploid) 10.498
CNS0095608Whole white alabastrum(tetraploid) 20.194
CNS0095609Whole white alabastrum(tetraploid) 30.124
CNS0095610Silvery flower (tetraploid) 118.350
CNS0095611Silvery flower (tetraploid) 23.697
CNS0095612Silvery flower (tetraploid) 326.564
CNS0095613Golden flower (tetraploid) 191.324
CNS0095614Golden flower (tetraploid) 227.944
CNS0095615Golden flower (tetraploid) 321.353
CRA001975CRR073297Stem 11.408
CRR073298Stem 22.112
CRR073299Stem 32.346
CRR073300Leaf 11.661
CRR073301Leaf 23.154
CRR073302Leaf 31.950
CRR073303Juvenile bud 11.916
CRR073304Juvenile bud 22.759
CRR073305Juvenile bud 35.048
CRR073306Third green 132.211
CRR073307Third green 231.706
CRR073308Third green 327.457
CRR073309Second white 129.763
CRR073310Second white 241.239
CRR073311Second white 333.579
CRR073312Silver flowering 137.542
CRR073313Silver flowering 233.537
CRR073314Silver flowering 339.390
CRR073315Gold flowering 10.697
CRR073316Gold flowering 21.125
CRR073317Gold flowering 32.735
CRR073318Tawny withering 11.732
CRR073319Tawny withering 26.875
CRR073320Tawny withering 30.663