Gene detail

Detail information of GWHGAAZE000698

Functional Annotation

Database	Orthologs	E value	Annotation
Nr	XP_007016182.1	7.4295E-154	DIV1A protein [Theobroma cacao]
Swissprot	tr\|Q8S9H7\|DIV_ANTMA	6E-140	Transcription factor DIVARICATA
trEMBL	tr\|A0A061GWE3\|A0A061GWE3_THECC	3E-154	DIV1A protein {ECO:0000313\|EMBL:EOY33801.1}
TAIR10	AT5G58900.1	2E-63	Homeodomain-like transcriptional regulator

Location And Transcript Sequence (JBrowse)

Scaffold	Type	Start	End	Strand
GWHAAZE00000001	gene	14203814	14205505	-
GWHAAZE00000001	mRNA	14203814	14205505	-
GWHAAZE00000001	exon	14203814	14204309	-
GWHAAZE00000001	exon	14205075	14205505	-
GWHAAZE00000001	CDS	14205075	14205505	-
GWHAAZE00000001	CDS	14203814	14204309	-

Transcript Sequence
>GWHTAAZE000700 ATGGAGATTCTATCACCAGCCTCTTACCTTTCGAATTCGAGCAATTCGAGCTGGTTAATTGAAGAGAGTAGAAGCATAAAATGGACTCCAGCAGAGAACAAGCTCTTTGAAAATGCTCTGGCAAAGTTTGATAAAGACACGCCGGACCGGTGGCAAAAAGTGGCGGCTATGGTGCCGGGAAAATCAGTGGCTGATGTGATGAAGCAATACAAGGAATTGGAGGATGATGTTAGTAGTATTGAAGCTGGGTTAATTCCAATTCCAGGATATAGTACATCTACTTTTACTTTGGAGTGGGGGAATAGCCATGGATTTGATGGGTTCAAGCCGCCGTACGGCGGTGGTGGTGGAGGAAAGAGATCGTCGTCTACCGGTCGGCCCTCGGAGCAAGAGAGGAAGAAGGGTGTTCCATGGACAGAAGAAGAGCACAAGCTGTTTCTTTTGGGGCTTAAAAAGTATGGAAAAGGCGACTGGAGAAACATTTCTCGTAATTTCGTGACTACCAGAACGCCCACACAAGTGGCTAGCCATGCTCAAAAGTACTTCATAAGGCAGCTTTCGGGTGGAAAAGACAAGAGAAGAGCAAGCATACATGATATAACTACAGTGAACCTCAACGAGAACCAAACTCATTCGCCAGATGAGAAGAGAACCCCTTCACCGGACCAGTGTAACGCTAACACGCACCCTCAGCAGCCTAATTCTGTACGAGTGCCTTTTCAGTGGAACCAACCTAACAATGGAGCTATGTGCTTCAATCAAACACAAGGGAATATGTTTGTTTCACCTTATGGGGTAGACGCGTATGGGCTTAAAATGCAGGGCCAGAATCTGCAGAGAGGGGCTAATGGTGTACACGAATCTTACGGTGGACCTCAGAGTATGGGTTTTCAGATGCATTCGGGGTTGCAGTATCATCATTTATGA

Network for GWHGAAZE000698

Network category	Network	Top300 PCC genelist
Coexpression Positive	Network	Top300 PCC genelist
Coexpression Negative	Network	Top300 PCC genelist

Functional Module

Module ID	Function Annotation

Protein Structure

Pfam accession	Pfam name	Alignment start	Alignment end	E-value
PF00249.32	Myb_DNA-binding	27	71	4.60E-06
PF00249.32	Myb_DNA-binding	137	181	1.20E-12

Protein Sequence

Gene family

Gene family	subfamily
Transcription Factors Family	MYB

KEGG pathway

KO	Enzyme	pathway	mapID
--	--	--	--

Gene Ontology

GO term	Ontology	Name
GO:0003677	molecular_function	DNA binding

Expression pattern

Expression pattern detail

SRP	Sample	Description	TPM
SRP075780	SRR3591705	youngest leaf	23.202
	SRR3591706	second leaf	38.874
	SRR3591707	mature leaf	39.077
	SRR3591708	Shoot apex	30.588
	SRR3591709	Stem	37.106
	SRR3591710	White floral bud	20.578
	SRR3591711	White flower	17.413
	SRR3591712	Green floral bud	26.453
	SRR3591713	Yellow flower	2.099
SRP173429	SRR8316895	Juvenile bud stage	29.306
	SRR8316896	Juvenile bud stage	29.458
	SRR8316897	Juvenile bud stage	15.750
	SRR8316894	Third green stage	10.640
	SRR8316900	Third green stage	28.419
	SRR8316901	Third green stage	26.355
	SRR8316898	Complete white stage	1.293
	SRR8316899	Complete white stage	51.100
	SRR8316903	Complete white stage	6.347
	SRR8316902	Silver flowering stage	0.464
	SRR8316904	Silver flowering stage	1.206
	SRR8316905	Silver flowering stage	0.536
	SRR8316906	Gold flowering stage	1.506
	SRR8316907	Gold flowering stage	0.425
	SRR8316908	Gold flowering stage	0.607
SRP132670	SRR6706286	Control	28.257
	SRR6706287	Light intensity 50%	29.169
	SRR6706288	Light intensity 20%	29.811
CNP0000432	CNS0095592	Slightly white alabastrum(diploid) 1	23.799
	CNS0095593	Slightly white alabastrum(diploid) 2	33.405
	CNS0095594	Slightly white alabastrum(diploid) 3	31.287
	CNS0095595	Whole white alabastrum(diploid) 2	32.110
	CNS0095596	Whole white alabastrum(diploid) 3	11.412
	CNS0095597	Whole white alabastrum(diploid) 4	21.552
	CNS0095598	Silvery flower (diploied) 1	38.134
	CNS0095599	Silvery flower (diploied) 2	32.760
	CNS0095600	Silvery flower (diploied) 3	10.404
	CNS0095601	Golden flower (diploid) 1	21.252
	CNS0095602	Golden flower (diploid) 2	11.749
	CNS0095603	Golden flower (diploid) 3	12.980
	CNS0095604	Slightly white alabastrum(tetraploid) 1	24.853
	CNS0095605	Slightly white alabastrum(tetraploid) 2	18.894
	CNS0095606	Slightly white alabastrum(tetraploid) 3	46.571
	CNS0095607	Whole white alabastrum(tetraploid) 1	20.079
	CNS0095608	Whole white alabastrum(tetraploid) 2	9.953
	CNS0095609	Whole white alabastrum(tetraploid) 3	18.192
	CNS0095610	Silvery flower (tetraploid) 1	1.633
	CNS0095611	Silvery flower (tetraploid) 2	3.751
	CNS0095612	Silvery flower (tetraploid) 3	2.601
	CNS0095613	Golden flower (tetraploid) 1	0.345
	CNS0095614	Golden flower (tetraploid) 2	1.605
	CNS0095615	Golden flower (tetraploid) 3	0.345
CRA001975	CRR073297	Stem 1	25.710
	CRR073298	Stem 2	28.445
	CRR073299	Stem 3	25.950
	CRR073300	Leaf 1	35.575
	CRR073301	Leaf 2	44.295
	CRR073302	Leaf 3	27.661
	CRR073303	Juvenile bud 1	38.853
	CRR073304	Juvenile bud 2	23.728
	CRR073305	Juvenile bud 3	53.626
	CRR073306	Third green 1	3.932
	CRR073307	Third green 2	2.893
	CRR073308	Third green 3	4.074
	CRR073309	Second white 1	1.244
	CRR073310	Second white 2	1.233
	CRR073311	Second white 3	1.390
	CRR073312	Silver flowering 1	2.469
	CRR073313	Silver flowering 2	1.695
	CRR073314	Silver flowering 3	2.323
	CRR073315	Gold flowering 1	25.945
	CRR073316	Gold flowering 2	28.527
	CRR073317	Gold flowering 3	21.663
	CRR073318	Tawny withering 1	31.000
	CRR073319	Tawny withering 2	31.210
	CRR073320	Tawny withering 3	28.587