Gene detail

Detail information of GWHGAAZE000763

Functional Annotation

Database	Orthologs	E value	Annotation
Nr	XP_007016428.1	4.6155E-130	ENTH/VHS family protein [Theobroma cacao]
Swissprot	tr\|Q8VY07\|EPN1_ARATH	4E-17	Clathrin interactor EPSIN 1
trEMBL	tr\|A0A061GXX0\|A0A061GXX0_THECC	2E-130	ENTH/VHS family protein {ECO:0000313\|EMBL:EOY34047.1}
TAIR10	AT3G46540.1	6E-70	ENTH/VHS family protein

Location And Transcript Sequence (JBrowse)

Scaffold	Type	Start	End	Strand
GWHAAZE00000001	gene	15441931	15444429	+
GWHAAZE00000001	mRNA	15441931	15444429	+
GWHAAZE00000001	exon	15441931	15442037	+
GWHAAZE00000001	exon	15442158	15442280	+
GWHAAZE00000001	exon	15443678	15443839	+
GWHAAZE00000001	exon	15443934	15444429	+
GWHAAZE00000001	CDS	15441931	15442037	+
GWHAAZE00000001	CDS	15442158	15442280	+
GWHAAZE00000001	CDS	15443678	15443839	+
GWHAAZE00000001	CDS	15443934	15444429	+

Transcript Sequence
>GWHTAAZE000765 ATGGGTGCACCTTTTTTTCATGAGTTCAAGAAACAAGCTTCTTTCTTCTTCAAGGAGAAGATCAAAACCGCTCGGTTAGCTCTCACCGATGTCACACCTGCCCAATTATTAATAGAAGAGGCCACAAACGGAAATCCGTGGACTCCAGATACTCGTACCCTAAAGATGATATCAAAGGCTGCTTTCGAAGTTGATGACTACTGGAGAATTGTCGACATTCTCCATAAGAGATTGGAGAGATTTGATAGAAAAGACTGGAGGCTATCCTACAAGGCTCTGATTGTACTGGAGCACTTATTAACCCATGGACCAGAGAGTGTTGCAGAGGAGTTTCAAGGTGACAAAGAAATTATGAGAGAGATGGGAAGCTTTCAACATATTGATGAGAAAGGATTCAATTGGGGCCTTAATGTTAGAAAGAAATCTGAGAAGATATTAACACTGCTCAATGAAGGTACTCTTCTCAAAGAAGAGAGAGATCGAGCTCGTAAACTAAGCAGAGGGATTGAAGGATTTGGGAGTTTTTGCCATCGAACTTCATCGGGGGAAGGGATCCTCCACAACTTGTCCTTGGGTACTTACGTTAGGTCTAATTCTCAGTTCAATGACCATGGAAACAAGGACGAAGATTTGATCCAAAAAAGAATTCAAAGTTTAGAGAATACTCAGGATTTGAAATTTGGCGATCTCCAAACAGTTGAAAGTACCAAAGAAAATGTGGGTCCCATGAAGGAAGATCGTGGGGAATCAAGACCACTTTTGGGTGGGGGAGAAGATGATCACAGGCATGGAGTTTCCATAGAAGAAGATCATCCTTTTAATGAGTCTGAGAATTTAACTAGTGTCTCTCTGCTTTCTACTACAGAAAAAATCTTAGAAGCATGCTGA

Network for GWHGAAZE000763

Network category	Network	Top300 PCC genelist
Coexpression Positive	Network	Top300 PCC genelist
Coexpression Negative	Network	Top300 PCC genelist

Functional Module

Module ID	Function Annotation

Protein Structure

Pfam accession	Pfam name	Alignment start	Alignment end	E-value
PF01417.21	ENTH	32	153	2.70E-31

Protein Sequence

Gene family

Gene family	subfamily
--	--

KEGG pathway

KO	Enzyme	pathway	mapID
K12471	EPN	Endocytosis	map04144

Gene Ontology

GO term	Ontology	Name

Expression pattern

Expression pattern detail

SRP	Sample	Description	TPM
SRP075780	SRR3591705	youngest leaf	0.718
	SRR3591706	second leaf	0.465
	SRR3591707	mature leaf	2.344
	SRR3591708	Shoot apex	1.147
	SRR3591709	Stem	9.683
	SRR3591710	White floral bud	4.227
	SRR3591711	White flower	20.693
	SRR3591712	Green floral bud	2.407
	SRR3591713	Yellow flower	87.457
SRP173429	SRR8316895	Juvenile bud stage	2.721
	SRR8316896	Juvenile bud stage	6.322
	SRR8316897	Juvenile bud stage	1.676
	SRR8316894	Third green stage	2.489
	SRR8316900	Third green stage	1.826
	SRR8316901	Third green stage	2.693
	SRR8316898	Complete white stage	1.183
	SRR8316899	Complete white stage	4.455
	SRR8316903	Complete white stage	2.826
	SRR8316902	Silver flowering stage	13.865
	SRR8316904	Silver flowering stage	13.626
	SRR8316905	Silver flowering stage	8.151
	SRR8316906	Gold flowering stage	72.384
	SRR8316907	Gold flowering stage	47.928
	SRR8316908	Gold flowering stage	82.207
SRP132670	SRR6706286	Control	1.783
	SRR6706287	Light intensity 50%	1.038
	SRR6706288	Light intensity 20%	1.073
CNP0000432	CNS0095592	Slightly white alabastrum(diploid) 1	0.885
	CNS0095593	Slightly white alabastrum(diploid) 2	2.832
	CNS0095594	Slightly white alabastrum(diploid) 3	2.390
	CNS0095595	Whole white alabastrum(diploid) 2	0.778
	CNS0095596	Whole white alabastrum(diploid) 3	0.373
	CNS0095597	Whole white alabastrum(diploid) 4	1.826
	CNS0095598	Silvery flower (diploied) 1	10.672
	CNS0095599	Silvery flower (diploied) 2	8.264
	CNS0095600	Silvery flower (diploied) 3	14.683
	CNS0095601	Golden flower (diploid) 1	21.782
	CNS0095602	Golden flower (diploid) 2	44.893
	CNS0095603	Golden flower (diploid) 3	39.367
	CNS0095604	Slightly white alabastrum(tetraploid) 1	0.705
	CNS0095605	Slightly white alabastrum(tetraploid) 2	0.244
	CNS0095606	Slightly white alabastrum(tetraploid) 3	2.254
	CNS0095607	Whole white alabastrum(tetraploid) 1	0.799
	CNS0095608	Whole white alabastrum(tetraploid) 2	0.249
	CNS0095609	Whole white alabastrum(tetraploid) 3	0.047
	CNS0095610	Silvery flower (tetraploid) 1	33.222
	CNS0095611	Silvery flower (tetraploid) 2	20.683
	CNS0095612	Silvery flower (tetraploid) 3	2.725
	CNS0095613	Golden flower (tetraploid) 1	43.313
	CNS0095614	Golden flower (tetraploid) 2	47.606
	CNS0095615	Golden flower (tetraploid) 3	20.439
CRA001975	CRR073297	Stem 1	0.729
	CRR073298	Stem 2	0.265
	CRR073299	Stem 3	0.460
	CRR073300	Leaf 1	0.136
	CRR073301	Leaf 2	0.635
	CRR073302	Leaf 3	0.046
	CRR073303	Juvenile bud 1	0.000
	CRR073304	Juvenile bud 2	0.084
	CRR073305	Juvenile bud 3	0.351
	CRR073306	Third green 1	0.341
	CRR073307	Third green 2	0.000
	CRR073308	Third green 3	0.030
	CRR073309	Second white 1	0.627
	CRR073310	Second white 2	1.453
	CRR073311	Second white 3	0.944
	CRR073312	Silver flowering 1	2.165
	CRR073313	Silver flowering 2	0.873
	CRR073314	Silver flowering 3	2.113
	CRR073315	Gold flowering 1	0.388
	CRR073316	Gold flowering 2	0.442
	CRR073317	Gold flowering 3	0.000
	CRR073318	Tawny withering 1	4.141
	CRR073319	Tawny withering 2	5.738
	CRR073320	Tawny withering 3	3.084