Detail information of GWHGAAZE000783


Functional Annotation

DatabaseOrthologsE valueAnnotation
NrACB20696.14.35084E-51putative cold-inducible protein [Camellia sinensis]
Swissprottr|Q42410|ZAT12_ARATH1E-29Zinc finger protein ZAT12
trEMBLtr|B2CZY8|B2CZY8_CAMSI2E-51Putative cold-inducible protein {ECO:0000313|EMBL:ACB20696.1}
TAIR10AT2G28710.11E-23C2H2-type zinc finger family protein

Location And Transcript Sequence (JBrowse)

ScaffoldTypeStartEndStrand
GWHAAZE00000001gene1583660315837073-
GWHAAZE00000001mRNA1583660315837073-
GWHAAZE00000001exon1583660315837073-
GWHAAZE00000001CDS1583660315837073-
Transcript Sequence

Network for GWHGAAZE000783

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist


Functional Module

Module IDFunction Annotation


Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF13912.7zf-C2H2_639646.40E-11
PF13912.7zf-C2H2_6861102.70E-08
Protein Sequence

Gene family

Gene familysubfamily
Transcription Factors FamilyC2H2

KEGG pathway

KO Enzyme pathway mapID
--------

Gene Ontology

GO term OntologyName
GO:0003676molecular_functionnucleic acid binding

Expression pattern


Expression pattern detail

SRPSampleDescriptionTPM
SRP075780SRR3591705youngest leaf0.000
SRR3591706second leaf0.000
SRR3591707mature leaf0.000
SRR3591708Shoot apex0.000
SRR3591709Stem0.582
SRR3591710White floral bud0.192
SRR3591711White flower0.864
SRR3591712Green floral bud0.151
SRR3591713Yellow flower0.325
SRP173429 SRR8316895Juvenile bud stage 0.000
SRR8316896Juvenile bud stage 0.234
SRR8316897Juvenile bud stage 0.000
SRR8316894Third green stage 0.000
SRR8316900Third green stage 0.187
SRR8316901Third green stage 0.180
SRR8316898Complete white stage 0.142
SRR8316899Complete white stage 0.000
SRR8316903Complete white stage 0.000
SRR8316902Silver flowering stage0.000
SRR8316904Silver flowering stage0.146
SRR8316905Silver flowering stage0.146
SRR8316906Gold flowering stage 0.651
SRR8316907Gold flowering stage 0.000
SRR8316908Gold flowering stage 1.074
SRP132670SRR6706286Control0.385
SRR6706287Light intensity 50%0.136
SRR6706288Light intensity 20%0.155
CNP0000432CNS0095592Slightly white alabastrum(diploid) 10.235
CNS0095593Slightly white alabastrum(diploid) 20.609
CNS0095594Slightly white alabastrum(diploid) 30.000
CNS0095595Whole white alabastrum(diploid) 20.210
CNS0095596Whole white alabastrum(diploid) 30.565
CNS0095597Whole white alabastrum(diploid) 40.000
CNS0095598Silvery flower (diploied) 10.325
CNS0095599Silvery flower (diploied) 20.000
CNS0095600Silvery flower (diploied) 30.000
CNS0095601Golden flower (diploid) 10.000
CNS0095602Golden flower (diploid) 20.107
CNS0095603Golden flower (diploid) 30.618
CNS0095604Slightly white alabastrum(tetraploid) 10.000
CNS0095605Slightly white alabastrum(tetraploid) 20.191
CNS0095606Slightly white alabastrum(tetraploid) 30.001
CNS0095607Whole white alabastrum(tetraploid) 10.114
CNS0095608Whole white alabastrum(tetraploid) 20.000
CNS0095609Whole white alabastrum(tetraploid) 30.381
CNS0095610Silvery flower (tetraploid) 10.223
CNS0095611Silvery flower (tetraploid) 20.000
CNS0095612Silvery flower (tetraploid) 30.430
CNS0095613Golden flower (tetraploid) 10.262
CNS0095614Golden flower (tetraploid) 20.838
CNS0095615Golden flower (tetraploid) 30.434
CRA001975CRR073297Stem 10.000
CRR073298Stem 20.213
CRR073299Stem 30.000
CRR073300Leaf 10.246
CRR073301Leaf 20.215
CRR073302Leaf 30.000
CRR073303Juvenile bud 10.100
CRR073304Juvenile bud 20.000
CRR073305Juvenile bud 30.000
CRR073306Third green 10.000
CRR073307Third green 20.000
CRR073308Third green 30.000
CRR073309Second white 10.000
CRR073310Second white 20.000
CRR073311Second white 30.000
CRR073312Silver flowering 10.101
CRR073313Silver flowering 20.663
CRR073314Silver flowering 30.000
CRR073315Gold flowering 10.000
CRR073316Gold flowering 20.000
CRR073317Gold flowering 30.000
CRR073318Tawny withering 13.184
CRR073319Tawny withering 25.352
CRR073320Tawny withering 30.000