Detail information of GWHGAAZE000862


Functional Annotation

DatabaseOrthologsE valueAnnotation
NrXP_002282009.10PREDICTED: V-type proton ATPase subunit a1 [Vitis vinifera]
Swissprottr|Q8RWZ7|VHAA1_ARATH0V-type proton ATPase subunit a1
trEMBLtr|D7SKS4|D7SKS4_VITVI0V-type proton ATPase subunit a {ECO:0000256|RuleBase:RU361189}
TAIR10AT2G28520.10vacuolar proton ATPase A1

Location And Transcript Sequence (JBrowse)

ScaffoldTypeStartEndStrand
GWHAAZE00000001gene1827299318287403-
GWHAAZE00000001mRNA1827299318287403-
GWHAAZE00000001exon1828729018287403-
GWHAAZE00000001exon1828553418285545-
GWHAAZE00000001exon1828462418284695-
GWHAAZE00000001exon1828437618284420-
GWHAAZE00000001exon1828312418283372-
GWHAAZE00000001exon1828292718283034-
GWHAAZE00000001exon1828211818282231-
GWHAAZE00000001exon1828185118282024-
GWHAAZE00000001exon1828116018281297-
GWHAAZE00000001exon1828051818280625-
GWHAAZE00000001exon1828027918280386-
GWHAAZE00000001exon1828002918280177-
GWHAAZE00000001exon1827821918278372-
GWHAAZE00000001exon1827783518277995-
GWHAAZE00000001exon1827555918275765-
GWHAAZE00000001exon1827503618275181-
GWHAAZE00000001exon1827482518274877-
GWHAAZE00000001exon1827385518274051-
GWHAAZE00000001exon1827370818273767-
GWHAAZE00000001exon1827299318273197-
GWHAAZE00000001CDS1828729018287403-
GWHAAZE00000001CDS1828553418285545-
GWHAAZE00000001CDS1828462418284695-
GWHAAZE00000001CDS1828437618284420-
GWHAAZE00000001CDS1828312418283372-
GWHAAZE00000001CDS1828292718283034-
GWHAAZE00000001CDS1828211818282231-
GWHAAZE00000001CDS1828185118282024-
GWHAAZE00000001CDS1828116018281297-
GWHAAZE00000001CDS1828051818280625-
GWHAAZE00000001CDS1828027918280386-
GWHAAZE00000001CDS1828002918280177-
GWHAAZE00000001CDS1827821918278372-
GWHAAZE00000001CDS1827783518277995-
GWHAAZE00000001CDS1827555918275765-
GWHAAZE00000001CDS1827503618275181-
GWHAAZE00000001CDS1827482518274877-
GWHAAZE00000001CDS1827385518274051-
GWHAAZE00000001CDS1827370818273767-
GWHAAZE00000001CDS1827299318273197-
Transcript Sequence

Network for GWHGAAZE000862

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist


Functional Module

Module IDFunction Annotation


Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF01496.20V_ATPase_I628497.70E-257
Protein Sequence

Gene family

Gene familysubfamily
----

KEGG pathway

KO Enzyme pathway mapID
K02154ATPeV0A, ATP6N Metabolic pathways map01100
Oxidative phosphorylationmap00190
Phagosomemap04145
Lysosomemap04142
Collecting duct acid secretionmap04966
Synaptic vesicle cyclemap04721

Gene Ontology

GO term OntologyName
GO:1902600biological_processproton transmembrane transport
GO:0000220cellular_componentvacuolar proton-transporting V-type ATPase, V0 domain
GO:0033179cellular_componentproton-transporting V-type ATPase, V0 domain
GO:0015078molecular_functionproton transmembrane transporter activity

Expression pattern


Expression pattern detail

SRPSampleDescriptionTPM
SRP075780SRR3591705youngest leaf10.795
SRR3591706second leaf11.003
SRR3591707mature leaf12.370
SRR3591708Shoot apex7.424
SRR3591709Stem11.324
SRR3591710White floral bud9.212
SRR3591711White flower12.498
SRR3591712Green floral bud8.497
SRR3591713Yellow flower6.617
SRP173429 SRR8316895Juvenile bud stage 5.874
SRR8316896Juvenile bud stage 8.845
SRR8316897Juvenile bud stage 5.498
SRR8316894Third green stage 3.519
SRR8316900Third green stage 10.465
SRR8316901Third green stage 8.281
SRR8316898Complete white stage 3.742
SRR8316899Complete white stage 10.963
SRR8316903Complete white stage 7.602
SRR8316902Silver flowering stage4.958
SRR8316904Silver flowering stage7.184
SRR8316905Silver flowering stage2.552
SRR8316906Gold flowering stage 8.391
SRR8316907Gold flowering stage 6.344
SRR8316908Gold flowering stage 8.199
SRP132670SRR6706286Control6.255
SRR6706287Light intensity 50%5.646
SRR6706288Light intensity 20%6.257
CNP0000432CNS0095592Slightly white alabastrum(diploid) 16.331
CNS0095593Slightly white alabastrum(diploid) 27.058
CNS0095594Slightly white alabastrum(diploid) 36.772
CNS0095595Whole white alabastrum(diploid) 25.975
CNS0095596Whole white alabastrum(diploid) 35.879
CNS0095597Whole white alabastrum(diploid) 45.379
CNS0095598Silvery flower (diploied) 17.599
CNS0095599Silvery flower (diploied) 27.294
CNS0095600Silvery flower (diploied) 310.333
CNS0095601Golden flower (diploid) 15.883
CNS0095602Golden flower (diploid) 29.604
CNS0095603Golden flower (diploid) 310.726
CNS0095604Slightly white alabastrum(tetraploid) 18.224
CNS0095605Slightly white alabastrum(tetraploid) 27.798
CNS0095606Slightly white alabastrum(tetraploid) 311.040
CNS0095607Whole white alabastrum(tetraploid) 18.149
CNS0095608Whole white alabastrum(tetraploid) 27.265
CNS0095609Whole white alabastrum(tetraploid) 38.595
CNS0095610Silvery flower (tetraploid) 111.064
CNS0095611Silvery flower (tetraploid) 210.507
CNS0095612Silvery flower (tetraploid) 39.489
CNS0095613Golden flower (tetraploid) 15.644
CNS0095614Golden flower (tetraploid) 27.648
CNS0095615Golden flower (tetraploid) 38.675
CRA001975CRR073297Stem 16.560
CRR073298Stem 25.752
CRR073299Stem 35.875
CRR073300Leaf 18.241
CRR073301Leaf 27.094
CRR073302Leaf 35.809
CRR073303Juvenile bud 15.428
CRR073304Juvenile bud 22.684
CRR073305Juvenile bud 36.020
CRR073306Third green 11.525
CRR073307Third green 21.651
CRR073308Third green 32.263
CRR073309Second white 11.543
CRR073310Second white 22.544
CRR073311Second white 32.069
CRR073312Silver flowering 11.563
CRR073313Silver flowering 21.893
CRR073314Silver flowering 31.845
CRR073315Gold flowering 14.661
CRR073316Gold flowering 26.147
CRR073317Gold flowering 32.979
CRR073318Tawny withering 16.310
CRR073319Tawny withering 28.631
CRR073320Tawny withering 38.605