Detail information of GWHGAAZE000971


Functional Annotation

DatabaseOrthologsE valueAnnotation
NrKHG05634.10Dolichol kinase [Gossypium arboreum]
trEMBLtr|A0A061GYB8|A0A061GYB8_THECC0Phosphatidate cytidylyltransferase family protein {ECO:0000313|EMBL:EOY34458.1}
TAIR10AT3G45040.11E-169phosphatidate cytidylyltransferase family protein

Location And Transcript Sequence (JBrowse)

ScaffoldTypeStartEndStrand
GWHAAZE00000001gene2068120820688775+
GWHAAZE00000001mRNA2068120820688775+
GWHAAZE00000001exon2068120820681319+
GWHAAZE00000001exon2068184820682054+
GWHAAZE00000001exon2068223420682338+
GWHAAZE00000001exon2068397920684049+
GWHAAZE00000001exon2068414020684220+
GWHAAZE00000001exon2068434120684555+
GWHAAZE00000001exon2068599720686186+
GWHAAZE00000001exon2068629120686356+
GWHAAZE00000001exon2068711020687198+
GWHAAZE00000001exon2068729420687408+
GWHAAZE00000001exon2068785020687901+
GWHAAZE00000001exon2068803620688173+
GWHAAZE00000001exon2068870820688775+
GWHAAZE00000001CDS2068120820681319+
GWHAAZE00000001CDS2068184820682054+
GWHAAZE00000001CDS2068223420682338+
GWHAAZE00000001CDS2068397920684049+
GWHAAZE00000001CDS2068414020684220+
GWHAAZE00000001CDS2068434120684555+
GWHAAZE00000001CDS2068599720686186+
GWHAAZE00000001CDS2068629120686356+
GWHAAZE00000001CDS2068711020687198+
GWHAAZE00000001CDS2068729420687408+
GWHAAZE00000001CDS2068785020687901+
GWHAAZE00000001CDS2068803620688173+
GWHAAZE00000001CDS2068870820688775+
Transcript Sequence

Network for GWHGAAZE000971

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist


Functional Module

Module IDFunction Annotation


Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
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Protein Sequence

Gene family

Gene familysubfamily
----

KEGG pathway

KO Enzyme pathway mapID
K00902DOLK Metabolic pathways map01100
N-Glycan biosynthesismap00510

Gene Ontology

GO term OntologyName

Expression pattern


Expression pattern detail

SRPSampleDescriptionTPM
SRP075780SRR3591705youngest leaf30.691
SRR3591706second leaf7.489
SRR3591707mature leaf10.634
SRR3591708Shoot apex12.566
SRR3591709Stem21.933
SRR3591710White floral bud31.603
SRR3591711White flower25.312
SRR3591712Green floral bud27.336
SRR3591713Yellow flower22.871
SRP173429 SRR8316895Juvenile bud stage 20.235
SRR8316896Juvenile bud stage 33.184
SRR8316897Juvenile bud stage 26.353
SRR8316894Third green stage 9.753
SRR8316900Third green stage 21.458
SRR8316901Third green stage 25.958
SRR8316898Complete white stage 6.536
SRR8316899Complete white stage 18.891
SRR8316903Complete white stage 13.903
SRR8316902Silver flowering stage13.487
SRR8316904Silver flowering stage17.544
SRR8316905Silver flowering stage7.260
SRR8316906Gold flowering stage 25.187
SRR8316907Gold flowering stage 20.741
SRR8316908Gold flowering stage 29.889
SRP132670SRR6706286Control13.340
SRR6706287Light intensity 50%13.284
SRR6706288Light intensity 20%13.776
CNP0000432CNS0095592Slightly white alabastrum(diploid) 121.614
CNS0095593Slightly white alabastrum(diploid) 220.076
CNS0095594Slightly white alabastrum(diploid) 319.933
CNS0095595Whole white alabastrum(diploid) 227.093
CNS0095596Whole white alabastrum(diploid) 322.335
CNS0095597Whole white alabastrum(diploid) 427.523
CNS0095598Silvery flower (diploied) 113.426
CNS0095599Silvery flower (diploied) 219.091
CNS0095600Silvery flower (diploied) 324.096
CNS0095601Golden flower (diploid) 117.584
CNS0095602Golden flower (diploid) 225.326
CNS0095603Golden flower (diploid) 325.225
CNS0095604Slightly white alabastrum(tetraploid) 115.564
CNS0095605Slightly white alabastrum(tetraploid) 216.642
CNS0095606Slightly white alabastrum(tetraploid) 311.876
CNS0095607Whole white alabastrum(tetraploid) 123.581
CNS0095608Whole white alabastrum(tetraploid) 228.040
CNS0095609Whole white alabastrum(tetraploid) 317.546
CNS0095610Silvery flower (tetraploid) 113.818
CNS0095611Silvery flower (tetraploid) 212.286
CNS0095612Silvery flower (tetraploid) 319.522
CNS0095613Golden flower (tetraploid) 18.581
CNS0095614Golden flower (tetraploid) 212.789
CNS0095615Golden flower (tetraploid) 318.389
CRA001975CRR073297Stem 117.216
CRR073298Stem 213.011
CRR073299Stem 311.271
CRR073300Leaf 115.965
CRR073301Leaf 215.718
CRR073302Leaf 312.872
CRR073303Juvenile bud 114.908
CRR073304Juvenile bud 210.507
CRR073305Juvenile bud 313.915
CRR073306Third green 113.242
CRR073307Third green 211.684
CRR073308Third green 311.884
CRR073309Second white 119.716
CRR073310Second white 218.942
CRR073311Second white 322.166
CRR073312Silver flowering 127.567
CRR073313Silver flowering 226.202
CRR073314Silver flowering 321.898
CRR073315Gold flowering 15.126
CRR073316Gold flowering 211.240
CRR073317Gold flowering 36.845
CRR073318Tawny withering 118.769
CRR073319Tawny withering 221.511
CRR073320Tawny withering 320.935