Detail information of GWHGAAZE000990


Functional Annotation

DatabaseOrthologsE valueAnnotation
NrXP_006493540.12.23089E-42PREDICTED: zinc finger protein ZAT5-like [Citrus sinensis]
Swissprottr|Q681X4|ZAT5_ARATH6E-39Zinc finger protein ZAT5
trEMBLtr|A0A022RBE3|A0A022RBE3_ERYGU3E-42Uncharacterized protein {ECO:0000313|EMBL:EYU37028.1}
TAIR10AT2G28200.12E-29C2H2-type zinc finger family protein

Location And Transcript Sequence (JBrowse)

ScaffoldTypeStartEndStrand
GWHAAZE00000001gene2123770921238464+
GWHAAZE00000001mRNA2123770921238464+
GWHAAZE00000001exon2123770921238464+
GWHAAZE00000001CDS2123770921238464+
Transcript Sequence

Network for GWHGAAZE000990

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist


Functional Module

Module IDFunction Annotation


Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF13912.7zf-C2H2_61001242.40E-09
PF13912.7zf-C2H2_61571813.90E-10
Protein Sequence

Gene family

Gene familysubfamily
Transcription Factors FamilyC2H2

KEGG pathway

KO Enzyme pathway mapID
--------

Gene Ontology

GO term OntologyName
GO:0003676molecular_functionnucleic acid binding

Expression pattern


Expression pattern detail

SRPSampleDescriptionTPM
SRP075780SRR3591705youngest leaf4.992
SRR3591706second leaf0.936
SRR3591707mature leaf1.137
SRR3591708Shoot apex0.143
SRR3591709Stem2.841
SRR3591710White floral bud3.115
SRR3591711White flower5.107
SRR3591712Green floral bud3.526
SRR3591713Yellow flower2.036
SRP173429 SRR8316895Juvenile bud stage 1.745
SRR8316896Juvenile bud stage 1.267
SRR8316897Juvenile bud stage 0.213
SRR8316894Third green stage 0.734
SRR8316900Third green stage 0.545
SRR8316901Third green stage 0.706
SRR8316898Complete white stage 3.084
SRR8316899Complete white stage 3.341
SRR8316903Complete white stage 5.661
SRR8316902Silver flowering stage4.361
SRR8316904Silver flowering stage5.741
SRR8316905Silver flowering stage2.203
SRR8316906Gold flowering stage 4.022
SRR8316907Gold flowering stage 3.035
SRR8316908Gold flowering stage 6.685
SRP132670SRR6706286Control1.974
SRR6706287Light intensity 50%1.737
SRR6706288Light intensity 20%1.543
CNP0000432CNS0095592Slightly white alabastrum(diploid) 11.400
CNS0095593Slightly white alabastrum(diploid) 20.351
CNS0095594Slightly white alabastrum(diploid) 31.494
CNS0095595Whole white alabastrum(diploid) 20.534
CNS0095596Whole white alabastrum(diploid) 30.604
CNS0095597Whole white alabastrum(diploid) 40.941
CNS0095598Silvery flower (diploied) 14.344
CNS0095599Silvery flower (diploied) 27.984
CNS0095600Silvery flower (diploied) 316.895
CNS0095601Golden flower (diploid) 13.162
CNS0095602Golden flower (diploid) 24.620
CNS0095603Golden flower (diploid) 35.166
CNS0095604Slightly white alabastrum(tetraploid) 10.324
CNS0095605Slightly white alabastrum(tetraploid) 20.652
CNS0095606Slightly white alabastrum(tetraploid) 30.605
CNS0095607Whole white alabastrum(tetraploid) 10.290
CNS0095608Whole white alabastrum(tetraploid) 20.341
CNS0095609Whole white alabastrum(tetraploid) 31.441
CNS0095610Silvery flower (tetraploid) 119.331
CNS0095611Silvery flower (tetraploid) 222.718
CNS0095612Silvery flower (tetraploid) 3112.910
CNS0095613Golden flower (tetraploid) 15.953
CNS0095614Golden flower (tetraploid) 29.473
CNS0095615Golden flower (tetraploid) 38.856
CRA001975CRR073297Stem 15.710
CRR073298Stem 23.981
CRR073299Stem 34.416
CRR073300Leaf 12.157
CRR073301Leaf 22.079
CRR073302Leaf 32.405
CRR073303Juvenile bud 15.845
CRR073304Juvenile bud 22.808
CRR073305Juvenile bud 34.693
CRR073306Third green 133.807
CRR073307Third green 220.705
CRR073308Third green 321.646
CRR073309Second white 12.548
CRR073310Second white 24.294
CRR073311Second white 32.070
CRR073312Silver flowering 11.136
CRR073313Silver flowering 20.309
CRR073314Silver flowering 30.605
CRR073315Gold flowering 10.000
CRR073316Gold flowering 21.636
CRR073317Gold flowering 30.911
CRR073318Tawny withering 18.826
CRR073319Tawny withering 22.838
CRR073320Tawny withering 37.093