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Detail information of GWHGAAZE001187
Functional Annotation
Database
Orthologs
E value
Annotation
Nr
XP_002275928.1
0
PREDICTED: protein argonaute 4 [Vitis vinifera]
Swissprot
tr|Q9ZVD5|AGO4_ARATH
0
Protein argonaute 4
trEMBL
tr|D7T1K2|D7T1K2_VITVI
0
Putative uncharacterized protein {ECO:0000313|EMBL:CBI24382.3}
TAIR10
AT2G27040.2
0
Argonaute family protein
Location And Transcript Sequence
(JBrowse)
Scaffold
Type
Start
End
Strand
GWHAAZE00000001
gene
27273380
27279422
+
GWHAAZE00000001
mRNA
27273380
27279422
+
GWHAAZE00000001
exon
27273380
27273637
+
GWHAAZE00000001
exon
27273755
27273960
+
GWHAAZE00000001
exon
27274296
27274520
+
GWHAAZE00000001
exon
27274703
27274839
+
GWHAAZE00000001
exon
27274935
27275032
+
GWHAAZE00000001
exon
27275112
27275209
+
GWHAAZE00000001
exon
27275344
27275509
+
GWHAAZE00000001
exon
27275608
27275724
+
GWHAAZE00000001
exon
27275801
27275908
+
GWHAAZE00000001
exon
27276278
27276340
+
GWHAAZE00000001
exon
27276443
27276556
+
GWHAAZE00000001
exon
27276656
27276821
+
GWHAAZE00000001
exon
27276905
27277017
+
GWHAAZE00000001
exon
27277164
27277301
+
GWHAAZE00000001
exon
27277451
27277581
+
GWHAAZE00000001
exon
27277787
27277852
+
GWHAAZE00000001
exon
27278161
27278224
+
GWHAAZE00000001
exon
27278326
27278437
+
GWHAAZE00000001
exon
27278512
27278585
+
GWHAAZE00000001
exon
27278928
27279022
+
GWHAAZE00000001
exon
27279116
27279147
+
GWHAAZE00000001
exon
27279247
27279422
+
GWHAAZE00000001
CDS
27273380
27273637
+
GWHAAZE00000001
CDS
27273755
27273960
+
GWHAAZE00000001
CDS
27274296
27274520
+
GWHAAZE00000001
CDS
27274703
27274839
+
GWHAAZE00000001
CDS
27274935
27275032
+
GWHAAZE00000001
CDS
27275112
27275209
+
GWHAAZE00000001
CDS
27275344
27275509
+
GWHAAZE00000001
CDS
27275608
27275724
+
GWHAAZE00000001
CDS
27275801
27275908
+
GWHAAZE00000001
CDS
27276278
27276340
+
GWHAAZE00000001
CDS
27276443
27276556
+
GWHAAZE00000001
CDS
27276656
27276821
+
GWHAAZE00000001
CDS
27276905
27277017
+
GWHAAZE00000001
CDS
27277164
27277301
+
GWHAAZE00000001
CDS
27277451
27277581
+
GWHAAZE00000001
CDS
27277787
27277852
+
GWHAAZE00000001
CDS
27278161
27278224
+
GWHAAZE00000001
CDS
27278326
27278437
+
GWHAAZE00000001
CDS
27278512
27278585
+
GWHAAZE00000001
CDS
27278928
27279022
+
GWHAAZE00000001
CDS
27279116
27279147
+
GWHAAZE00000001
CDS
27279247
27279422
+
Transcript Sequence
>GWHTAAZE001189 ATGGATTCCTTTGAAGGTAATGGTAACGGCAATGGTAATGGGGTAACAGAGGCTTTGCCACCTCCCCCGCCTGTGCCTGAAAATGTTGTGCCATTGAAAGCTGAGACAGAGAATGTTCCGGAACCAGTTAAGAAGAAGATTATGCGAGTCCCAATAGCTAGACGTGGCCTGGCGTCTAAGGGTTCCAAGATCCCGATCCTAACTAATCACTTCAAAGTGAACGTAACTAATGTGGATGGCCACTTCTTCCATTACAGTGTTGCCCTTTTTTATGAAGATGGTCGCCCAGTTGATGGAAAGGGCATTGGAAGAAAAGTGCTGGATCGAGTTCACGAGACGTATGACACAGAGTTAGCAGGGAAAGAGTTTGCTTACGATGGAGAAAAGAGCTTGTTTACTGTTGGAGCTCTGCCCAGGAACAAGCTTGAATTTACTGTTGTGCTTGAGGATGTTACATCCAATAGGAACAATGGAAATAGCAGCCCTGGTGGTCATGGAAGTCCAAATGAGGCTGATCGGAAAAGGATGCGTCGAGCATATCAATCTAAAACTTTCAAAGTGGAGATAAGTTTTGCTGCCAAAATTCCTATGCAGGCCATTGCACTTGCATTACGAGGCCAAGAATCAGAGAACTCTCAAGAGGCATTAAGAGTTCTAGATATCATTCTAAGGCAGCATGCAGCGAAGCAGGGTTGTTTGCTGGTTCGACAATCCTTCTTCCACAATGACCCGAGGAATTTCACTGATGTGGGAGGTGGTGTTCTTGGCTGCCGAGGATTCCATTCGAGTTTCCGAACTACCCAGGGTGGCTTATCTTTGAACATCGATGTATCAACAACCATGATTATCCAGCCTGGGCCAGTTGTGGATTTTCTTATTGCCAATCAAAATGTGAAAGATCCGTTTTCGATTGACTGGGCAAAGGCCAAGCGTACACTAAAGAATTTGAGGGTGAAGATAAGTACCACCAATACTGAGTACAAGATAACTGGGTTAAGTGAAAGGCCTTGCAAGGAGCAGACCTTTTCATTGAAGCAAAAAAGCGGAAGGGATGATGATGGTGAAGTTCAAGAAATCACTGTTTATGATTATTATGTCAATAACCGCCACATTGAGTTACGCTACTCAGCTGATTTGCCGTGCATCAATGTTGGGAAGCCTAAGCGCCCAACTTTCTTTCCGCTTGAGCTATGTTCGTTGGTCTCATTGCAACGTTATACAAAATCTCTAACCAATCTTCAACGAGCTTCACTAGTGGAGAAATCAAGACAAAAGCCGCAAGAGAGAATGAAAGTTTTGTCAGATGCTCTGAAGATCAACAATTATGAAGCTGAACCATTGCTGCGCTCTTGTGGCATTTCAATTGGTACCAACTTCACTCAGGTTGAAGGACGTGTTCTAAATGCTCCAAAGTTAAAAGCAGGAAATGGAGAAGAGTTTTTTGCTAGAAATGGGCGGTGGAACTTTAACAACAAGAAACTGGTGGACCCCACCAAAATAGAACGCTGGGCAGTGGTCAACTTTTCAGCTCGATGTGACACCCGTGGCCTTATCCGGGATTTGATCAAGTGTGGAGGGATGAAGGGCATTCACATTGATGCTCCATTTGACGTCTTTGAGGAGAACCCTGCAAATAGACGGGCTCCACCTCTTGTTAGAGTTGAAAAGATGTTTGAAGATATACAATCCAAGCTTCCTGGGGCTCCCCAGTTCCTTCTCTGTATACTTCCGGAGCGGAAAAACTCTCTTCTCTACGGTCCATGGAAGCGAAAGAATCTCTCTGAATATGGAATTGTTACACAATGCATTGCCCCAACAAGAGTCAATGATCAATACCTCACAAATGTTCTGCTTAAGATCAATGCAAAGCTTGGTGGGTTGAATTCTATGTTGGTGATGGAGCATACTCCTTCAATTCCCTTGGTGTCTAAGGTGCCTACTATAATTCTTGGAATGGATGTTTCGCACGGTTCCCCGGGCCAGTCTGATGTTCCATCGATTGCAGCGGTGGTAAGTTCTAGGCAGTGGCCATTGATTTCCCGTTATAGGGCATCGGTGCGTACTCAGTCACCGAAGGTTGAAATGATTGATTCCCTCTTCAAGAAAACCTCTGACACAGAAGATGATGGGATAATTAGGGAGCTTTTGGTAGATTTCTATACAAGTTCTGGGAAACGAAAGCCAGATCAGATCATCATTTTCAGGGATGGTGTCAGCGAATCACAGTTTAATCAAGTTCTGAACATTGAGTTGGATCAAATTATAGAGGCATGCAAGTTTCTTGATGAAAAATGGTGCCCAAAGTTTGTTGTGATTATTGCTCAGAAAAATCACCATACCAAGTTCTTCCAAACCAACTCTCCTGATAATGTTCCTCCAGGTACCGTGATTGACAACAAAATATGTCATCCAAGGAACAACGATTTTTACTTGTGCGCTCAAGCTGGAATGATTGGGACCACACGGCCCACCCACTACCATGTTTTATTGGACGAGGTTGGTTTCTCAGCTGATGATCTCCAGGACCTTGTACATTCTCTGTCTTATGTGTACCAGAGGAGCACCACTGCGATTTCTGTAGTTGCCCCAATATGCTATGCTCACTTGGCAGCCACTCAGATGGGGCAATTTATGAAGTTTGATGACATGTCAGAGACATCATCGAGCCATGGAGGTGTGACTGCTCCTGGGGCAATTCCTGTTCCTCAGCTGCCAAGACTGAAGGAGAATGTTTGCAATTCGATGTTCTTTTGTTAA
Network for GWHGAAZE001187
Network category
Network
Top300 PCC genelist
Coexpression Positive
Network
Top300 PCC genelist
Coexpression Negative
Network
Top300 PCC genelist
Functional Module
Module ID
Function Annotation
Protein Structure
Pfam accession
Pfam name
Alignment start
Alignment end
E-value
PF16486.6
ArgoN
63
223
1.80E-27
PF08699.11
ArgoL1
235
283
1.80E-16
PF02170.23
PAZ
289
418
3.80E-26
PF16488.6
ArgoL2
428
473
1.30E-13
PF02171.18
Piwi
572
879
1.70E-104
Protein Sequence
>GWHPAAZE001188 MDSFEGNGNGNGNGVTEALPPPPPVPENVVPLKAETENVPEPVKKKIMRVPIARRGLASKGSKIPILTNHFKVNVTNVDGHFFHYSVALFYEDGRPVDGKGIGRKVLDRVHETYDTELAGKEFAYDGEKSLFTVGALPRNKLEFTVVLEDVTSNRNNGNSSPGGHGSPNEADRKRMRRAYQSKTFKVEISFAAKIPMQAIALALRGQESENSQEALRVLDIILRQHAAKQGCLLVRQSFFHNDPRNFTDVGGGVLGCRGFHSSFRTTQGGLSLNIDVSTTMIIQPGPVVDFLIANQNVKDPFSIDWAKAKRTLKNLRVKISTTNTEYKITGLSERPCKEQTFSLKQKSGRDDDGEVQEITVYDYYVNNRHIELRYSADLPCINVGKPKRPTFFPLELCSLVSLQRYTKSLTNLQRASLVEKSRQKPQERMKVLSDALKINNYEAEPLLRSCGISIGTNFTQVEGRVLNAPKLKAGNGEEFFARNGRWNFNNKKLVDPTKIERWAVVNFSARCDTRGLIRDLIKCGGMKGIHIDAPFDVFEENPANRRAPPLVRVEKMFEDIQSKLPGAPQFLLCILPERKNSLLYGPWKRKNLSEYGIVTQCIAPTRVNDQYLTNVLLKINAKLGGLNSMLVMEHTPSIPLVSKVPTIILGMDVSHGSPGQSDVPSIAAVVSSRQWPLISRYRASVRTQSPKVEMIDSLFKKTSDTEDDGIIRELLVDFYTSSGKRKPDQIIIFRDGVSESQFNQVLNIELDQIIEACKFLDEKWCPKFVVIIAQKNHHTKFFQTNSPDNVPPGTVIDNKICHPRNNDFYLCAQAGMIGTTRPTHYHVLLDEVGFSADDLQDLVHSLSYVYQRSTTAISVVAPICYAHLAATQMGQFMKFDDMSETSSSHGGVTAPGAIPVPQLPRLKENVCNSMFFC
Gene family
Gene family
subfamily
--
--
KEGG pathway
KO
Enzyme
pathway
mapID
K11593
ELF2C, AGO
Axon regeneration
map04361
Gene Ontology
GO term
Ontology
Name
GO:0005515
molecular_function
protein binding
GO:0003676
molecular_function
nucleic acid binding
Expression pattern
Expression pattern detail
SRP
Sample
Description
TPM
SRP075780
SRR3591705
youngest leaf
215.264
SRR3591706
second leaf
140.798
SRR3591707
mature leaf
88.336
SRR3591708
Shoot apex
271.437
SRR3591709
Stem
143.771
SRR3591710
White floral bud
145.633
SRR3591711
White flower
136.748
SRR3591712
Green floral bud
144.532
SRR3591713
Yellow flower
88.251
SRP173429
SRR8316895
Juvenile bud stage
164.351
SRR8316896
Juvenile bud stage
183.821
SRR8316897
Juvenile bud stage
100.071
SRR8316894
Third green stage
68.060
SRR8316900
Third green stage
185.745
SRR8316901
Third green stage
146.164
SRR8316898
Complete white stage
47.728
SRR8316899
Complete white stage
201.807
SRR8316903
Complete white stage
94.197
SRR8316902
Silver flowering stage
25.922
SRR8316904
Silver flowering stage
40.450
SRR8316905
Silver flowering stage
17.779
SRR8316906
Gold flowering stage
59.681
SRR8316907
Gold flowering stage
49.919
SRR8316908
Gold flowering stage
59.808
SRP132670
SRR6706286
Control
145.026
SRR6706287
Light intensity 50%
145.470
SRR6706288
Light intensity 20%
160.226
CNP0000432
CNS0095592
Slightly white alabastrum(diploid) 1
87.525
CNS0095593
Slightly white alabastrum(diploid) 2
81.824
CNS0095594
Slightly white alabastrum(diploid) 3
77.529
CNS0095595
Whole white alabastrum(diploid) 2
73.998
CNS0095596
Whole white alabastrum(diploid) 3
62.301
CNS0095597
Whole white alabastrum(diploid) 4
62.771
CNS0095598
Silvery flower (diploied) 1
125.521
CNS0095599
Silvery flower (diploied) 2
115.067
CNS0095600
Silvery flower (diploied) 3
140.889
CNS0095601
Golden flower (diploid) 1
105.039
CNS0095602
Golden flower (diploid) 2
149.959
CNS0095603
Golden flower (diploid) 3
149.694
CNS0095604
Slightly white alabastrum(tetraploid) 1
127.671
CNS0095605
Slightly white alabastrum(tetraploid) 2
84.226
CNS0095606
Slightly white alabastrum(tetraploid) 3
305.008
CNS0095607
Whole white alabastrum(tetraploid) 1
63.408
CNS0095608
Whole white alabastrum(tetraploid) 2
37.674
CNS0095609
Whole white alabastrum(tetraploid) 3
160.124
CNS0095610
Silvery flower (tetraploid) 1
133.868
CNS0095611
Silvery flower (tetraploid) 2
158.354
CNS0095612
Silvery flower (tetraploid) 3
107.408
CNS0095613
Golden flower (tetraploid) 1
55.197
CNS0095614
Golden flower (tetraploid) 2
108.029
CNS0095615
Golden flower (tetraploid) 3
62.651
CRA001975
CRR073297
Stem 1
260.819
CRR073298
Stem 2
228.332
CRR073299
Stem 3
259.828
CRR073300
Leaf 1
257.261
CRR073301
Leaf 2
211.257
CRR073302
Leaf 3
201.570
CRR073303
Juvenile bud 1
190.521
CRR073304
Juvenile bud 2
122.320
CRR073305
Juvenile bud 3
270.251
CRR073306
Third green 1
23.944
CRR073307
Third green 2
21.776
CRR073308
Third green 3
36.838
CRR073309
Second white 1
32.267
CRR073310
Second white 2
27.146
CRR073311
Second white 3
24.342
CRR073312
Silver flowering 1
15.535
CRR073313
Silver flowering 2
20.276
CRR073314
Silver flowering 3
15.590
CRR073315
Gold flowering 1
82.849
CRR073316
Gold flowering 2
146.070
CRR073317
Gold flowering 3
123.745
CRR073318
Tawny withering 1
133.459
CRR073319
Tawny withering 2
93.855
CRR073320
Tawny withering 3
144.028