Detail information of GWHGAAZE001191


Functional Annotation

DatabaseOrthologsE valueAnnotation
NrAEF32083.11.7426E-27ent-kaurene synthase [Castanea mollissima]
Swissprottr|Q9SAK2|KSB_ARATH1E-22Ent-kaur-16-ene synthase, chloroplastic (Precursor)
trEMBLtr|M1BZZ5|M1BZZ5_SOLTU6E-29Uncharacterized protein {ECO:0000313|EnsemblPlants:PGSC0003DMT400056851}
TAIR10AT1G79460.15E-20Terpenoid cyclases/Protein prenyltransferases superfamily protein

Location And Transcript Sequence (JBrowse)

ScaffoldTypeStartEndStrand
GWHAAZE00000001gene2738240327382690+
GWHAAZE00000001mRNA2738240327382690+
GWHAAZE00000001exon2738240327382690+
GWHAAZE00000001CDS2738240327382690+
Transcript Sequence

Network for GWHGAAZE001191

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist


Functional Module

Module IDFunction Annotation


Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
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Protein Sequence

Gene family

Gene familysubfamily
----

KEGG pathway

KO Enzyme pathway mapID
K04121E4.2.3.19 Metabolic pathways map01100
Biosynthesis of secondary metabolitesmap01110
Diterpenoid biosynthesismap00904

Gene Ontology

GO term OntologyName

Expression pattern


Expression pattern detail

SRPSampleDescriptionTPM
SRP075780SRR3591705youngest leaf0.000
SRR3591706second leaf0.000
SRR3591707mature leaf0.000
SRR3591708Shoot apex0.000
SRR3591709Stem0.123
SRR3591710White floral bud0.000
SRR3591711White flower0.000
SRR3591712Green floral bud0.000
SRR3591713Yellow flower0.000
SRP173429 SRR8316895Juvenile bud stage 0.234
SRR8316896Juvenile bud stage 1.067
SRR8316897Juvenile bud stage 0.000
SRR8316894Third green stage 0.196
SRR8316900Third green stage 0.464
SRR8316901Third green stage 1.461
SRR8316898Complete white stage 0.000
SRR8316899Complete white stage 0.450
SRR8316903Complete white stage 0.219
SRR8316902Silver flowering stage0.291
SRR8316904Silver flowering stage0.000
SRR8316905Silver flowering stage0.001
SRR8316906Gold flowering stage 0.084
SRR8316907Gold flowering stage 0.311
SRR8316908Gold flowering stage 0.000
SRP132670SRR6706286Control0.019
SRR6706287Light intensity 50%0.127
SRR6706288Light intensity 20%0.120
CNP0000432CNS0095592Slightly white alabastrum(diploid) 11.574
CNS0095593Slightly white alabastrum(diploid) 21.227
CNS0095594Slightly white alabastrum(diploid) 31.053
CNS0095595Whole white alabastrum(diploid) 21.278
CNS0095596Whole white alabastrum(diploid) 31.163
CNS0095597Whole white alabastrum(diploid) 41.788
CNS0095598Silvery flower (diploied) 10.795
CNS0095599Silvery flower (diploied) 20.185
CNS0095600Silvery flower (diploied) 30.000
CNS0095601Golden flower (diploid) 10.155
CNS0095602Golden flower (diploid) 20.065
CNS0095603Golden flower (diploid) 30.059
CNS0095604Slightly white alabastrum(tetraploid) 10.237
CNS0095605Slightly white alabastrum(tetraploid) 20.035
CNS0095606Slightly white alabastrum(tetraploid) 30.000
CNS0095607Whole white alabastrum(tetraploid) 10.000
CNS0095608Whole white alabastrum(tetraploid) 20.000
CNS0095609Whole white alabastrum(tetraploid) 30.000
CNS0095610Silvery flower (tetraploid) 10.000
CNS0095611Silvery flower (tetraploid) 20.000
CNS0095612Silvery flower (tetraploid) 30.000
CNS0095613Golden flower (tetraploid) 10.000
CNS0095614Golden flower (tetraploid) 20.000
CNS0095615Golden flower (tetraploid) 30.000
CRA001975CRR073297Stem 10.000
CRR073298Stem 20.138
CRR073299Stem 30.000
CRR073300Leaf 10.618
CRR073301Leaf 20.079
CRR073302Leaf 30.000
CRR073303Juvenile bud 10.000
CRR073304Juvenile bud 20.056
CRR073305Juvenile bud 30.156
CRR073306Third green 10.000
CRR073307Third green 20.000
CRR073308Third green 30.000
CRR073309Second white 10.000
CRR073310Second white 20.000
CRR073311Second white 30.000
CRR073312Silver flowering 10.000
CRR073313Silver flowering 20.000
CRR073314Silver flowering 30.000
CRR073315Gold flowering 10.000
CRR073316Gold flowering 20.000
CRR073317Gold flowering 30.000
CRR073318Tawny withering 10.000
CRR073319Tawny withering 20.000
CRR073320Tawny withering 30.000