Detail information of GWHGAAZE001208


Functional Annotation

DatabaseOrthologsE valueAnnotation
NrCDP09298.10unnamed protein product [Coffea canephora]
Swissprottr|Q41558|HBP1C_WHEAT2E-171Transcription factor HBP-1b(c1) (Fragment)
trEMBLtr|A0A068UNV8|A0A068UNV8_COFCA0Coffea canephora DH200=94 genomic scaffold, scaffold_37 {ECO:0000313|EMBL:CDP09298.1}
TAIR10AT5G06950.46E-103bZIP transcription factor family protein

Location And Transcript Sequence (JBrowse)

ScaffoldTypeStartEndStrand
GWHAAZE00000001gene2781671227827360-
GWHAAZE00000001mRNA2781671227827360-
GWHAAZE00000001exon2782727827827360-
GWHAAZE00000001exon2782714327827202-
GWHAAZE00000001exon2782417227824220-
GWHAAZE00000001exon2782354227823619-
GWHAAZE00000001exon2782340927823460-
GWHAAZE00000001exon2782071027820981-
GWHAAZE00000001exon2781785027818095-
GWHAAZE00000001exon2781671227816858-
GWHAAZE00000001CDS2782727827827360-
GWHAAZE00000001CDS2782714327827202-
GWHAAZE00000001CDS2782417227824220-
GWHAAZE00000001CDS2782354227823619-
GWHAAZE00000001CDS2782340927823460-
GWHAAZE00000001CDS2782071027820981-
GWHAAZE00000001CDS2781785027818095-
GWHAAZE00000001CDS2781671227816858-
Transcript Sequence

Network for GWHGAAZE001208

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist


Functional Module

Module IDFunction Annotation


Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF07716.16bZIP_251862.60E-05
PF14144.7DOG11272001.30E-30
Protein Sequence

Gene family

Gene familysubfamily
Transcription Factors FamilybZIP

KEGG pathway

KO Enzyme pathway mapID
K14431TGA Plant hormone signal transduction map04075

Gene Ontology

GO term OntologyName
GO:0006351biological_processtranscription, DNA-templated
GO:0006355biological_processregulation of transcription, DNA-templated
GO:0043565molecular_functionsequence-specific DNA binding
GO:0003700molecular_functionDNA-binding transcription factor activity

Expression pattern


Expression pattern detail

SRPSampleDescriptionTPM
SRP075780SRR3591705youngest leaf29.587
SRR3591706second leaf27.588
SRR3591707mature leaf34.958
SRR3591708Shoot apex42.471
SRR3591709Stem54.257
SRR3591710White floral bud45.213
SRR3591711White flower56.717
SRR3591712Green floral bud38.185
SRR3591713Yellow flower44.359
SRP173429 SRR8316895Juvenile bud stage 19.292
SRR8316896Juvenile bud stage 31.828
SRR8316897Juvenile bud stage 10.506
SRR8316894Third green stage 12.614
SRR8316900Third green stage 23.268
SRR8316901Third green stage 25.311
SRR8316898Complete white stage 16.461
SRR8316899Complete white stage 54.870
SRR8316903Complete white stage 22.683
SRR8316902Silver flowering stage17.091
SRR8316904Silver flowering stage19.895
SRR8316905Silver flowering stage10.478
SRR8316906Gold flowering stage 36.685
SRR8316907Gold flowering stage 38.513
SRR8316908Gold flowering stage 45.997
SRP132670SRR6706286Control29.426
SRR6706287Light intensity 50%27.717
SRR6706288Light intensity 20%30.821
CNP0000432CNS0095592Slightly white alabastrum(diploid) 123.752
CNS0095593Slightly white alabastrum(diploid) 224.123
CNS0095594Slightly white alabastrum(diploid) 321.554
CNS0095595Whole white alabastrum(diploid) 222.706
CNS0095596Whole white alabastrum(diploid) 314.388
CNS0095597Whole white alabastrum(diploid) 417.118
CNS0095598Silvery flower (diploied) 143.426
CNS0095599Silvery flower (diploied) 226.497
CNS0095600Silvery flower (diploied) 337.052
CNS0095601Golden flower (diploid) 137.629
CNS0095602Golden flower (diploid) 245.139
CNS0095603Golden flower (diploid) 338.727
CNS0095604Slightly white alabastrum(tetraploid) 124.914
CNS0095605Slightly white alabastrum(tetraploid) 218.017
CNS0095606Slightly white alabastrum(tetraploid) 346.960
CNS0095607Whole white alabastrum(tetraploid) 115.978
CNS0095608Whole white alabastrum(tetraploid) 28.049
CNS0095609Whole white alabastrum(tetraploid) 323.288
CNS0095610Silvery flower (tetraploid) 133.904
CNS0095611Silvery flower (tetraploid) 235.849
CNS0095612Silvery flower (tetraploid) 329.432
CNS0095613Golden flower (tetraploid) 129.003
CNS0095614Golden flower (tetraploid) 235.058
CNS0095615Golden flower (tetraploid) 339.751
CRA001975CRR073297Stem 138.569
CRR073298Stem 235.126
CRR073299Stem 344.148
CRR073300Leaf 136.920
CRR073301Leaf 244.525
CRR073302Leaf 333.478
CRR073303Juvenile bud 129.145
CRR073304Juvenile bud 230.145
CRR073305Juvenile bud 344.801
CRR073306Third green 123.084
CRR073307Third green 222.983
CRR073308Third green 324.428
CRR073309Second white 124.024
CRR073310Second white 227.142
CRR073311Second white 319.886
CRR073312Silver flowering 127.595
CRR073313Silver flowering 230.749
CRR073314Silver flowering 326.913
CRR073315Gold flowering 129.294
CRR073316Gold flowering 240.969
CRR073317Gold flowering 334.173
CRR073318Tawny withering 165.388
CRR073319Tawny withering 263.760
CRR073320Tawny withering 358.040