Detail information of GWHGAAZE001242


Functional Annotation

DatabaseOrthologsE valueAnnotation
NrXP_011070060.19.1817E-129PREDICTED: putative methyltransferase At1g22800 [Sesamum indicum]
Swissprottr|O80543|Y1280_ARATH2E-121Putative methyltransferase At1g22800
trEMBLtr|M5XBV8|M5XBV8_PRUPE4E-129Uncharacterized protein {ECO:0000313|EMBL:EMJ23597.1}
TAIR10AT1G22800.19E-98S-adenosyl-L-methionine-dependent methyltransferases superfamily protein

Location And Transcript Sequence (JBrowse)

ScaffoldTypeStartEndStrand
GWHAAZE00000001gene2898678228991371+
GWHAAZE00000001mRNA2898678228991371+
GWHAAZE00000001exon2898678228986936+
GWHAAZE00000001exon2898710328987172+
GWHAAZE00000001exon2898816328988227+
GWHAAZE00000001exon2898832928988407+
GWHAAZE00000001exon2898933028989417+
GWHAAZE00000001exon2899073728990801+
GWHAAZE00000001exon2899126428991371+
GWHAAZE00000001CDS2898678228986936+
GWHAAZE00000001CDS2898710328987172+
GWHAAZE00000001CDS2898816328988227+
GWHAAZE00000001CDS2898832928988407+
GWHAAZE00000001CDS2898933028989417+
GWHAAZE00000001CDS2899073728990801+
GWHAAZE00000001CDS2899126428991371+
Transcript Sequence

Network for GWHGAAZE001242

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist


Functional Module

Module IDFunction Annotation


Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF08241.13Methyltransf_119872.10E-08
Protein Sequence

Gene family

Gene familysubfamily
----

KEGG pathway

KO Enzyme pathway mapID
K18162NDUFAF5 Thermogenesis map04714

Gene Ontology

GO term OntologyName
GO:0008168molecular_functionmethyltransferase activity

Expression pattern


Expression pattern detail

SRPSampleDescriptionTPM
SRP075780SRR3591705youngest leaf5.888
SRR3591706second leaf6.931
SRR3591707mature leaf4.748
SRR3591708Shoot apex10.158
SRR3591709Stem7.617
SRR3591710White floral bud9.945
SRR3591711White flower8.274
SRR3591712Green floral bud13.540
SRR3591713Yellow flower9.561
SRP173429 SRR8316895Juvenile bud stage 4.639
SRR8316896Juvenile bud stage 7.991
SRR8316897Juvenile bud stage 10.540
SRR8316894Third green stage 2.211
SRR8316900Third green stage 9.826
SRR8316901Third green stage 8.844
SRR8316898Complete white stage 2.464
SRR8316899Complete white stage 5.846
SRR8316903Complete white stage 3.228
SRR8316902Silver flowering stage1.921
SRR8316904Silver flowering stage2.635
SRR8316905Silver flowering stage1.466
SRR8316906Gold flowering stage 5.028
SRR8316907Gold flowering stage 5.456
SRR8316908Gold flowering stage 8.140
SRP132670SRR6706286Control8.084
SRR6706287Light intensity 50%8.173
SRR6706288Light intensity 20%9.937
CNP0000432CNS0095592Slightly white alabastrum(diploid) 17.758
CNS0095593Slightly white alabastrum(diploid) 24.778
CNS0095594Slightly white alabastrum(diploid) 36.076
CNS0095595Whole white alabastrum(diploid) 26.179
CNS0095596Whole white alabastrum(diploid) 39.537
CNS0095597Whole white alabastrum(diploid) 48.594
CNS0095598Silvery flower (diploied) 13.527
CNS0095599Silvery flower (diploied) 26.974
CNS0095600Silvery flower (diploied) 33.672
CNS0095601Golden flower (diploid) 13.291
CNS0095602Golden flower (diploid) 23.573
CNS0095603Golden flower (diploid) 33.499
CNS0095604Slightly white alabastrum(tetraploid) 120.685
CNS0095605Slightly white alabastrum(tetraploid) 218.959
CNS0095606Slightly white alabastrum(tetraploid) 320.920
CNS0095607Whole white alabastrum(tetraploid) 114.544
CNS0095608Whole white alabastrum(tetraploid) 211.544
CNS0095609Whole white alabastrum(tetraploid) 310.067
CNS0095610Silvery flower (tetraploid) 112.047
CNS0095611Silvery flower (tetraploid) 214.103
CNS0095612Silvery flower (tetraploid) 311.543
CNS0095613Golden flower (tetraploid) 111.104
CNS0095614Golden flower (tetraploid) 215.310
CNS0095615Golden flower (tetraploid) 314.478
CRA001975CRR073297Stem 16.053
CRR073298Stem 26.163
CRR073299Stem 34.876
CRR073300Leaf 18.270
CRR073301Leaf 29.074
CRR073302Leaf 38.912
CRR073303Juvenile bud 16.105
CRR073304Juvenile bud 23.827
CRR073305Juvenile bud 34.610
CRR073306Third green 11.582
CRR073307Third green 20.628
CRR073308Third green 31.289
CRR073309Second white 11.015
CRR073310Second white 20.851
CRR073311Second white 31.254
CRR073312Silver flowering 10.371
CRR073313Silver flowering 20.218
CRR073314Silver flowering 30.125
CRR073315Gold flowering 14.757
CRR073316Gold flowering 24.643
CRR073317Gold flowering 32.438
CRR073318Tawny withering 11.526
CRR073319Tawny withering 21.417
CRR073320Tawny withering 32.844