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Detail information of GWHGAAZE001250
Functional Annotation
Database
Orthologs
E value
Annotation
Location And Transcript Sequence
(JBrowse)
Scaffold
Type
Start
End
Strand
GWHAAZE00000001
gene
29279766
29280619
-
GWHAAZE00000001
mRNA
29279766
29280619
-
GWHAAZE00000001
exon
29280391
29280619
-
GWHAAZE00000001
exon
29279766
29280169
-
GWHAAZE00000001
CDS
29280391
29280619
-
GWHAAZE00000001
CDS
29279766
29280169
-
Transcript Sequence
>GWHTAAZE001252 ATGCCCACCACCACGCCTGATGGATTTCGAGCAATCCCACATTGCTCATCCAACCAGAAGAAGAAGCTTGTTTATGCTGTCGGTTCTACGAAATTTAACAGCTCCCTGAAAGCTTTTGTATGTGATTTCGGGGCAACTCCTGTATGGGAAGAACTTCCTCCTATGCCCCGGCCAATAGACCTAGCTTTTGGTCTTGCTTCTCCCTTAGATGGAAATGTCTATGCATTTGCCCCCTGCTTTTCTGCACCTGCTGCCCGGATTGACGCTTCGTCCTCTGTGGCTGTAGGTGATGTCATCTACAGATTCAACAACTCACGACTCTCTGCACTTAACTTAGCCTCTAAAAGACCCTTTTTTAAGAAAGTATATGGGCTGGAGGAGGTGCTGCCTACCATTTATGGAACTGTTGGACTTGGACATATAGCTTACCTTGGCAAGGGAAAGCTATGTATTGTATGGGGTCTACATGACCTTCATGTAAAAGACCCTTTCACCAACCCTATCACGCATATTACTTGTTTAAAGTTTTGGGTTGGTGTTTGCAACCAGACGAATCAATTGTGTGCTGTTGTTGATAGATGTGAACACTATGCCGCTCATGGGCTAGAGCTCTACGAGTTCATGGCATTTTAA
Network for GWHGAAZE001250
Network category
Network
Top300 PCC genelist
Coexpression Positive
Network
Top300 PCC genelist
Coexpression Negative
Network
Top300 PCC genelist
Functional Module
Module ID
Function Annotation
CFinderModule0172
Protein Structure
Pfam accession
Pfam name
Alignment start
Alignment end
E-value
--
--
--
--
--
Protein Sequence
>GWHPAAZE001251 MPTTTPDGFRAIPHCSSNQKKKLVYAVGSTKFNSSLKAFVCDFGATPVWEELPPMPRPIDLAFGLASPLDGNVYAFAPCFSAPAARIDASSSVAVGDVIYRFNNSRLSALNLASKRPFFKKVYGLEEVLPTIYGTVGLGHIAYLGKGKLCIVWGLHDLHVKDPFTNPITHITCLKFWVGVCNQTNQLCAVVDRCEHYAAHGLELYEFMAF
Gene family
Gene family
subfamily
--
--
KEGG pathway
KO
Enzyme
pathway
mapID
--
--
--
--
Gene Ontology
GO term
Ontology
Name
Expression pattern
Expression pattern detail
SRP
Sample
Description
TPM
SRP075780
SRR3591705
youngest leaf
2.825
SRR3591706
second leaf
2.413
SRR3591707
mature leaf
2.097
SRR3591708
Shoot apex
8.687
SRR3591709
Stem
5.585
SRR3591710
White floral bud
9.821
SRR3591711
White flower
14.541
SRR3591712
Green floral bud
6.224
SRR3591713
Yellow flower
13.709
SRP173429
SRR8316895
Juvenile bud stage
1.079
SRR8316896
Juvenile bud stage
0.622
SRR8316897
Juvenile bud stage
0.483
SRR8316894
Third green stage
0.457
SRR8316900
Third green stage
0.948
SRR8316901
Third green stage
1.316
SRR8316898
Complete white stage
1.115
SRR8316899
Complete white stage
1.484
SRR8316903
Complete white stage
1.405
SRR8316902
Silver flowering stage
0.881
SRR8316904
Silver flowering stage
1.453
SRR8316905
Silver flowering stage
0.554
SRR8316906
Gold flowering stage
2.411
SRR8316907
Gold flowering stage
1.805
SRR8316908
Gold flowering stage
2.545
SRP132670
SRR6706286
Control
0.743
SRR6706287
Light intensity 50%
0.500
SRR6706288
Light intensity 20%
0.777
CNP0000432
CNS0095592
Slightly white alabastrum(diploid) 1
1.402
CNS0095593
Slightly white alabastrum(diploid) 2
0.211
CNS0095594
Slightly white alabastrum(diploid) 3
0.864
CNS0095595
Whole white alabastrum(diploid) 2
0.941
CNS0095596
Whole white alabastrum(diploid) 3
0.724
CNS0095597
Whole white alabastrum(diploid) 4
0.556
CNS0095598
Silvery flower (diploied) 1
2.876
CNS0095599
Silvery flower (diploied) 2
2.613
CNS0095600
Silvery flower (diploied) 3
3.359
CNS0095601
Golden flower (diploid) 1
2.142
CNS0095602
Golden flower (diploid) 2
3.966
CNS0095603
Golden flower (diploid) 3
2.318
CNS0095604
Slightly white alabastrum(tetraploid) 1
3.989
CNS0095605
Slightly white alabastrum(tetraploid) 2
3.755
CNS0095606
Slightly white alabastrum(tetraploid) 3
4.528
CNS0095607
Whole white alabastrum(tetraploid) 1
1.703
CNS0095608
Whole white alabastrum(tetraploid) 2
2.861
CNS0095609
Whole white alabastrum(tetraploid) 3
2.342
CNS0095610
Silvery flower (tetraploid) 1
7.584
CNS0095611
Silvery flower (tetraploid) 2
10.906
CNS0095612
Silvery flower (tetraploid) 3
6.455
CNS0095613
Golden flower (tetraploid) 1
7.674
CNS0095614
Golden flower (tetraploid) 2
8.096
CNS0095615
Golden flower (tetraploid) 3
7.002
CRA001975
CRR073297
Stem 1
1.048
CRR073298
Stem 2
0.880
CRR073299
Stem 3
2.227
CRR073300
Leaf 1
0.540
CRR073301
Leaf 2
1.956
CRR073302
Leaf 3
0.995
CRR073303
Juvenile bud 1
1.438
CRR073304
Juvenile bud 2
1.121
CRR073305
Juvenile bud 3
1.345
CRR073306
Third green 1
0.278
CRR073307
Third green 2
0.360
CRR073308
Third green 3
0.043
CRR073309
Second white 1
0.849
CRR073310
Second white 2
1.014
CRR073311
Second white 3
0.666
CRR073312
Silver flowering 1
1.619
CRR073313
Silver flowering 2
1.259
CRR073314
Silver flowering 3
2.095
CRR073315
Gold flowering 1
2.568
CRR073316
Gold flowering 2
3.897
CRR073317
Gold flowering 3
2.458
CRR073318
Tawny withering 1
1.236
CRR073319
Tawny withering 2
1.198
CRR073320
Tawny withering 3
0.316