Detail information of GWHGAAZE001250


Functional Annotation

DatabaseOrthologsE valueAnnotation

Location And Transcript Sequence (JBrowse)

ScaffoldTypeStartEndStrand
GWHAAZE00000001gene2927976629280619-
GWHAAZE00000001mRNA2927976629280619-
GWHAAZE00000001exon2928039129280619-
GWHAAZE00000001exon2927976629280169-
GWHAAZE00000001CDS2928039129280619-
GWHAAZE00000001CDS2927976629280169-
Transcript Sequence

Network for GWHGAAZE001250

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist


Functional Module

Module IDFunction Annotation
CFinderModule0172


Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
----------
Protein Sequence

Gene family

Gene familysubfamily
----

KEGG pathway

KO Enzyme pathway mapID
--------

Gene Ontology

GO term OntologyName

Expression pattern

Created with Highcharts 5.0.4Chart context menuExpression pattern for GWHGAAZE001250.youngest leafsecond leafmature leafShoot apexStemWhite floral budWhite flowerGreen floral budYellow flowerJuvenile bud stage 1Juvenile bud stage 2Juvenile bud stage 3Third green stage 1Third green stage 2Third green stage 3Complete white stage 1Complete white stage 2Complete white stage 3Silver flowering stage 1Silver flowering stage 2Silver flowering stage 3Gold flowering stage 1Gold flowering stage 2Gold flowering stage 3Control 1Light intensity 50%Light intensity 20%Slightly white alabastrum(diploid) 1Slightly white alabastrum(diploid) 2Slightly white alabastrum(diploid) 3Whole white alabastrum(diploid) 1Whole white alabastrum(diploid) 2Whole white alabastrum(diploid) 3Silvery flower (diploied) 1Silvery flower (diploied) 2Silvery flower (diploied) 3Golden flower (diploid) 1Golden flower (diploid) 2Golden flower (diploid) 3Slightly white alabastrum(tetraploid) 1Slightly white alabastrum(tetraploid) 2Slightly white alabastrum(tetraploid) 3Whole white alabastrum(tetraploid) 1Whole white alabastrum(tetraploid) 2Whole white alabastrum(tetraploid) 3Silvery flower (tetraploid) 1Silvery flower (tetraploid) 2Silvery flower (tetraploid) 3Golden flower (tetraploid) 1Golden flower (tetraploid) 2Golden flower (tetraploid) 3Stem 1Stem 2Stem 3Leaf 1Leaf 2Leaf 3Juvenile bud 1Juvenile bud 2Juvenile bud 3Third green 1Third green 2Third green 3Second white 1Second white 2Second white 3Silver flowering 1Silver flowering 2Silver flowering 3Gold flowering 1Gold flowering 2Gold flowering 3Tawny withering 1Tawny withering 2Tawny withering 3012345678910111213141516Highcharts.com

Expression pattern detail

SRPSampleDescriptionTPM
SRP075780SRR3591705youngest leaf2.825
SRR3591706second leaf2.413
SRR3591707mature leaf2.097
SRR3591708Shoot apex8.687
SRR3591709Stem5.585
SRR3591710White floral bud9.821
SRR3591711White flower14.541
SRR3591712Green floral bud6.224
SRR3591713Yellow flower13.709
SRP173429 SRR8316895Juvenile bud stage 1.079
SRR8316896Juvenile bud stage 0.622
SRR8316897Juvenile bud stage 0.483
SRR8316894Third green stage 0.457
SRR8316900Third green stage 0.948
SRR8316901Third green stage 1.316
SRR8316898Complete white stage 1.115
SRR8316899Complete white stage 1.484
SRR8316903Complete white stage 1.405
SRR8316902Silver flowering stage0.881
SRR8316904Silver flowering stage1.453
SRR8316905Silver flowering stage0.554
SRR8316906Gold flowering stage 2.411
SRR8316907Gold flowering stage 1.805
SRR8316908Gold flowering stage 2.545
SRP132670SRR6706286Control0.743
SRR6706287Light intensity 50%0.500
SRR6706288Light intensity 20%0.777
CNP0000432CNS0095592Slightly white alabastrum(diploid) 11.402
CNS0095593Slightly white alabastrum(diploid) 20.211
CNS0095594Slightly white alabastrum(diploid) 30.864
CNS0095595Whole white alabastrum(diploid) 20.941
CNS0095596Whole white alabastrum(diploid) 30.724
CNS0095597Whole white alabastrum(diploid) 40.556
CNS0095598Silvery flower (diploied) 12.876
CNS0095599Silvery flower (diploied) 22.613
CNS0095600Silvery flower (diploied) 33.359
CNS0095601Golden flower (diploid) 12.142
CNS0095602Golden flower (diploid) 23.966
CNS0095603Golden flower (diploid) 32.318
CNS0095604Slightly white alabastrum(tetraploid) 13.989
CNS0095605Slightly white alabastrum(tetraploid) 23.755
CNS0095606Slightly white alabastrum(tetraploid) 34.528
CNS0095607Whole white alabastrum(tetraploid) 11.703
CNS0095608Whole white alabastrum(tetraploid) 22.861
CNS0095609Whole white alabastrum(tetraploid) 32.342
CNS0095610Silvery flower (tetraploid) 17.584
CNS0095611Silvery flower (tetraploid) 210.906
CNS0095612Silvery flower (tetraploid) 36.455
CNS0095613Golden flower (tetraploid) 17.674
CNS0095614Golden flower (tetraploid) 28.096
CNS0095615Golden flower (tetraploid) 37.002
CRA001975CRR073297Stem 11.048
CRR073298Stem 20.880
CRR073299Stem 32.227
CRR073300Leaf 10.540
CRR073301Leaf 21.956
CRR073302Leaf 30.995
CRR073303Juvenile bud 11.438
CRR073304Juvenile bud 21.121
CRR073305Juvenile bud 31.345
CRR073306Third green 10.278
CRR073307Third green 20.360
CRR073308Third green 30.043
CRR073309Second white 10.849
CRR073310Second white 21.014
CRR073311Second white 30.666
CRR073312Silver flowering 11.619
CRR073313Silver flowering 21.259
CRR073314Silver flowering 32.095
CRR073315Gold flowering 12.568
CRR073316Gold flowering 23.897
CRR073317Gold flowering 32.458
CRR073318Tawny withering 11.236
CRR073319Tawny withering 21.198
CRR073320Tawny withering 30.316