Detail information of GWHGAAZE001267


Functional Annotation

DatabaseOrthologsE valueAnnotation
NrXP_009760350.15.66391E-50PREDICTED: mitochondrial fission 1 protein A-like [Nicotiana sylvestris]
Swissprottr|Q9M1J1|FIS1A_ARATH3E-39Mitochondrial fission 1 protein A
trEMBLtr|M1D380|M1D380_SOLTU1E-47Uncharacterized protein {ECO:0000313|EnsemblPlants:PGSC0003DMT400080258}
TAIR10AT3G57090.13E-32Tetratricopeptide repeat (TPR)-like superfamily protein

Location And Transcript Sequence (JBrowse)

ScaffoldTypeStartEndStrand
GWHAAZE00000001gene2968101229688339-
GWHAAZE00000001mRNA2968101229688339-
GWHAAZE00000001exon2968824729688339-
GWHAAZE00000001exon2968244229682506-
GWHAAZE00000001exon2968133129681593-
GWHAAZE00000001exon2968101229681139-
GWHAAZE00000001CDS2968824729688339-
GWHAAZE00000001CDS2968244229682506-
GWHAAZE00000001CDS2968133129681593-
GWHAAZE00000001CDS2968101229681139-
Transcript Sequence

Network for GWHGAAZE001267

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist


Functional Module

Module IDFunction Annotation


Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF14852.7Fis1_TPR_N1141434.20E-11
PF14853.7Fis1_TPR_C1531829.40E-10
Protein Sequence

Gene family

Gene familysubfamily
----

KEGG pathway

KO Enzyme pathway mapID
K17969FIS1, TTC11, MDV2 Mitophagy - animal map04137
Mitophagy - yeastmap04139

Gene Ontology

GO term OntologyName
GO:0005515molecular_functionprotein binding

Expression pattern


Expression pattern detail

SRPSampleDescriptionTPM
SRP075780SRR3591705youngest leaf28.196
SRR3591706second leaf15.060
SRR3591707mature leaf20.844
SRR3591708Shoot apex26.259
SRR3591709Stem49.073
SRR3591710White floral bud21.163
SRR3591711White flower27.883
SRR3591712Green floral bud23.271
SRR3591713Yellow flower28.648
SRP173429 SRR8316895Juvenile bud stage 18.323
SRR8316896Juvenile bud stage 30.019
SRR8316897Juvenile bud stage 0.090
SRR8316894Third green stage 11.658
SRR8316900Third green stage 37.562
SRR8316901Third green stage 34.160
SRR8316898Complete white stage 20.132
SRR8316899Complete white stage 48.977
SRR8316903Complete white stage 32.635
SRR8316902Silver flowering stage18.205
SRR8316904Silver flowering stage25.938
SRR8316905Silver flowering stage13.308
SRR8316906Gold flowering stage 45.383
SRR8316907Gold flowering stage 45.614
SRR8316908Gold flowering stage 16.661
SRP132670SRR6706286Control49.329
SRR6706287Light intensity 50%51.052
SRR6706288Light intensity 20%49.976
CNP0000432CNS0095592Slightly white alabastrum(diploid) 123.556
CNS0095593Slightly white alabastrum(diploid) 221.025
CNS0095594Slightly white alabastrum(diploid) 319.963
CNS0095595Whole white alabastrum(diploid) 223.666
CNS0095596Whole white alabastrum(diploid) 318.610
CNS0095597Whole white alabastrum(diploid) 423.689
CNS0095598Silvery flower (diploied) 125.205
CNS0095599Silvery flower (diploied) 228.082
CNS0095600Silvery flower (diploied) 333.432
CNS0095601Golden flower (diploid) 123.958
CNS0095602Golden flower (diploid) 234.843
CNS0095603Golden flower (diploid) 330.844
CNS0095604Slightly white alabastrum(tetraploid) 110.361
CNS0095605Slightly white alabastrum(tetraploid) 27.633
CNS0095606Slightly white alabastrum(tetraploid) 314.556
CNS0095607Whole white alabastrum(tetraploid) 18.887
CNS0095608Whole white alabastrum(tetraploid) 27.372
CNS0095609Whole white alabastrum(tetraploid) 38.794
CNS0095610Silvery flower (tetraploid) 122.245
CNS0095611Silvery flower (tetraploid) 219.551
CNS0095612Silvery flower (tetraploid) 311.505
CNS0095613Golden flower (tetraploid) 118.792
CNS0095614Golden flower (tetraploid) 215.403
CNS0095615Golden flower (tetraploid) 321.961
CRA001975CRR073297Stem 138.073
CRR073298Stem 235.881
CRR073299Stem 353.102
CRR073300Leaf 146.015
CRR073301Leaf 241.741
CRR073302Leaf 350.822
CRR073303Juvenile bud 161.282
CRR073304Juvenile bud 250.616
CRR073305Juvenile bud 358.797
CRR073306Third green 135.246
CRR073307Third green 239.677
CRR073308Third green 333.000
CRR073309Second white 143.604
CRR073310Second white 232.740
CRR073311Second white 328.461
CRR073312Silver flowering 125.517
CRR073313Silver flowering 232.241
CRR073314Silver flowering 325.611
CRR073315Gold flowering 135.653
CRR073316Gold flowering 232.040
CRR073317Gold flowering 327.282
CRR073318Tawny withering 156.406
CRR073319Tawny withering 257.063
CRR073320Tawny withering 368.528