Detail information of GWHGAAZE001316


Functional Annotation

DatabaseOrthologsE valueAnnotation
NrAFO84085.10hexokinase [Actinidia chinensis]
Swissprottr|Q9LPS1|HXK3_ARATH0Hexokinase-3
trEMBLtr|S4SLH3|S4SLH3_ACTCH0Hexokinase {ECO:0000313|EMBL:AFO84085.1}
TAIR10AT1G50460.10hexokinase-like 1

Location And Transcript Sequence (JBrowse)

ScaffoldTypeStartEndStrand
GWHAAZE00000001gene3175163431759476-
GWHAAZE00000001mRNA3175163431759476-
GWHAAZE00000001exon3175163431752014-
GWHAAZE00000001exon3175263731752718-
GWHAAZE00000001exon3175592831756055-
GWHAAZE00000001exon3175616031756258-
GWHAAZE00000001exon3175636431756519-
GWHAAZE00000001exon3175723331757307-
GWHAAZE00000001exon3175746731757649-
GWHAAZE00000001exon3175773831757900-
GWHAAZE00000001exon3175925931759476-
GWHAAZE00000001CDS3175925931759476-
GWHAAZE00000001CDS3175773831757900-
GWHAAZE00000001CDS3175746731757649-
GWHAAZE00000001CDS3175723331757307-
GWHAAZE00000001CDS3175636431756519-
GWHAAZE00000001CDS3175616031756258-
GWHAAZE00000001CDS3175592831756055-
GWHAAZE00000001CDS3175263731752718-
GWHAAZE00000001CDS3175163431752014-
Transcript Sequence

Network for GWHGAAZE001316

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist


Functional Module

Module IDFunction Annotation


Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF00349.22Hexokinase_1242262.30E-56
PF03727.17Hexokinase_22334835.70E-79
Protein Sequence

Gene family

Gene familysubfamily
----

KEGG pathway

KO Enzyme pathway mapID
K00844HK Metabolic pathways map01100
Biosynthesis of secondary metabolitesmap01110
Microbial metabolism in diverse environmentsmap01120
Carbon metabolismmap01200
Glycolysis / Gluconeogenesismap00010
Fructose and mannose metabolismmap00051
Galactose metabolismmap00052
Starch and sucrose metabolismmap00500
Amino sugar and nucleotide sugar metabolismmap00520
Streptomycin biosynthesismap00521
Neomycin, kanamycin and gentamicin biosynthesismap00524
HIF-1 signaling pathwaymap04066
Insulin signaling pathwaymap04910
Carbohydrate digestion and absorptionmap04973

Gene Ontology

GO term OntologyName
GO:0001678biological_processcellular glucose homeostasis
GO:0005975biological_processcarbohydrate metabolic process
GO:0004396molecular_functionhexokinase activity
GO:0005524molecular_functionATP binding
GO:0005536molecular_functionglucose binding
GO:0016773molecular_functionphosphotransferase activity, alcohol group as acceptor

Expression pattern


Expression pattern detail

SRPSampleDescriptionTPM
SRP075780SRR3591705youngest leaf23.480
SRR3591706second leaf4.353
SRR3591707mature leaf6.469
SRR3591708Shoot apex12.896
SRR3591709Stem15.431
SRR3591710White floral bud19.042
SRR3591711White flower21.178
SRR3591712Green floral bud8.378
SRR3591713Yellow flower23.806
SRP173429 SRR8316895Juvenile bud stage 21.406
SRR8316896Juvenile bud stage 19.041
SRR8316897Juvenile bud stage 13.162
SRR8316894Third green stage 4.496
SRR8316900Third green stage 8.559
SRR8316901Third green stage 12.174
SRR8316898Complete white stage 6.727
SRR8316899Complete white stage 11.312
SRR8316903Complete white stage 10.744
SRR8316902Silver flowering stage13.539
SRR8316904Silver flowering stage13.551
SRR8316905Silver flowering stage7.057
SRR8316906Gold flowering stage 23.138
SRR8316907Gold flowering stage 27.642
SRR8316908Gold flowering stage 27.601
SRP132670SRR6706286Control10.258
SRR6706287Light intensity 50%13.670
SRR6706288Light intensity 20%13.788
CNP0000432CNS0095592Slightly white alabastrum(diploid) 116.021
CNS0095593Slightly white alabastrum(diploid) 213.426
CNS0095594Slightly white alabastrum(diploid) 316.472
CNS0095595Whole white alabastrum(diploid) 213.642
CNS0095596Whole white alabastrum(diploid) 311.967
CNS0095597Whole white alabastrum(diploid) 411.582
CNS0095598Silvery flower (diploied) 120.161
CNS0095599Silvery flower (diploied) 217.048
CNS0095600Silvery flower (diploied) 320.689
CNS0095601Golden flower (diploid) 119.037
CNS0095602Golden flower (diploid) 223.506
CNS0095603Golden flower (diploid) 322.623
CNS0095604Slightly white alabastrum(tetraploid) 19.776
CNS0095605Slightly white alabastrum(tetraploid) 28.502
CNS0095606Slightly white alabastrum(tetraploid) 313.357
CNS0095607Whole white alabastrum(tetraploid) 110.690
CNS0095608Whole white alabastrum(tetraploid) 27.680
CNS0095609Whole white alabastrum(tetraploid) 38.838
CNS0095610Silvery flower (tetraploid) 113.432
CNS0095611Silvery flower (tetraploid) 214.010
CNS0095612Silvery flower (tetraploid) 331.887
CNS0095613Golden flower (tetraploid) 115.437
CNS0095614Golden flower (tetraploid) 213.724
CNS0095615Golden flower (tetraploid) 310.122
CRA001975CRR073297Stem 119.078
CRR073298Stem 217.973
CRR073299Stem 316.001
CRR073300Leaf 110.548
CRR073301Leaf 215.662
CRR073302Leaf 314.717
CRR073303Juvenile bud 110.807
CRR073304Juvenile bud 29.492
CRR073305Juvenile bud 314.532
CRR073306Third green 126.054
CRR073307Third green 222.015
CRR073308Third green 321.354
CRR073309Second white 117.290
CRR073310Second white 218.709
CRR073311Second white 322.550
CRR073312Silver flowering 116.817
CRR073313Silver flowering 29.162
CRR073314Silver flowering 312.388
CRR073315Gold flowering 19.785
CRR073316Gold flowering 220.514
CRR073317Gold flowering 37.193
CRR073318Tawny withering 119.914
CRR073319Tawny withering 219.506
CRR073320Tawny withering 316.215