Detail information of GWHGAAZE001418


Functional Annotation

DatabaseOrthologsE valueAnnotation
NrCBI32905.31.33006E-96unnamed protein product [Vitis vinifera]
Swissprottr|P49332|GSTXC_TOBAC7E-92Probable glutathione S-transferase parC
trEMBLtr|F6HR78|F6HR78_VITVI8E-97Putative uncharacterized protein {ECO:0000313|EMBL:CCB57186.1}
TAIR10AT1G78380.11E-65glutathione S-transferase TAU 19

Location And Transcript Sequence (JBrowse)

ScaffoldTypeStartEndStrand
GWHAAZE00000001gene3736626437367679+
GWHAAZE00000001mRNA3736626437367679+
GWHAAZE00000001exon3736626437366440+
GWHAAZE00000001exon3736733537367679+
GWHAAZE00000001CDS3736626437366440+
GWHAAZE00000001CDS3736733537367679+
Transcript Sequence

Network for GWHGAAZE001418

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist


Functional Module

Module IDFunction Annotation


Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF02798.21GST_N2309.00E-06
PF13410.7GST_C_2741421.70E-11
Protein Sequence

Gene family

Gene familysubfamily
----

KEGG pathway

KO Enzyme pathway mapID
K00799GST, gst Metabolic pathways map01100
Glutathione metabolismmap00480
Metabolism of xenobiotics by cytochrome P450map00980
Drug metabolism - cytochrome P450map00982
Drug metabolism - other enzymesmap00983
Longevity regulating pathway - wormmap04212

Gene Ontology

GO term OntologyName
GO:0005515molecular_functionprotein binding

Expression pattern


Expression pattern detail

SRPSampleDescriptionTPM
SRP075780SRR3591705youngest leaf0.000
SRR3591706second leaf0.531
SRR3591707mature leaf0.000
SRR3591708Shoot apex0.000
SRR3591709Stem0.000
SRR3591710White floral bud0.170
SRR3591711White flower0.697
SRR3591712Green floral bud0.126
SRR3591713Yellow flower2.621
SRP173429 SRR8316895Juvenile bud stage 0.463
SRR8316896Juvenile bud stage 1.138
SRR8316897Juvenile bud stage 0.000
SRR8316894Third green stage 0.259
SRR8316900Third green stage 0.310
SRR8316901Third green stage 0.185
SRR8316898Complete white stage 0.251
SRR8316899Complete white stage 0.158
SRR8316903Complete white stage 0.078
SRR8316902Silver flowering stage3.888
SRR8316904Silver flowering stage5.735
SRR8316905Silver flowering stage3.852
SRR8316906Gold flowering stage 27.715
SRR8316907Gold flowering stage 32.788
SRR8316908Gold flowering stage 10.754
SRP132670SRR6706286Control0.488
SRR6706287Light intensity 50%0.361
SRR6706288Light intensity 20%0.316
CNP0000432CNS0095592Slightly white alabastrum(diploid) 10.178
CNS0095593Slightly white alabastrum(diploid) 20.056
CNS0095594Slightly white alabastrum(diploid) 30.513
CNS0095595Whole white alabastrum(diploid) 20.000
CNS0095596Whole white alabastrum(diploid) 30.152
CNS0095597Whole white alabastrum(diploid) 40.429
CNS0095598Silvery flower (diploied) 10.857
CNS0095599Silvery flower (diploied) 20.000
CNS0095600Silvery flower (diploied) 33.278
CNS0095601Golden flower (diploid) 10.349
CNS0095602Golden flower (diploid) 23.140
CNS0095603Golden flower (diploid) 32.422
CNS0095604Slightly white alabastrum(tetraploid) 10.096
CNS0095605Slightly white alabastrum(tetraploid) 20.000
CNS0095606Slightly white alabastrum(tetraploid) 30.635
CNS0095607Whole white alabastrum(tetraploid) 10.245
CNS0095608Whole white alabastrum(tetraploid) 20.151
CNS0095609Whole white alabastrum(tetraploid) 30.199
CNS0095610Silvery flower (tetraploid) 10.489
CNS0095611Silvery flower (tetraploid) 20.168
CNS0095612Silvery flower (tetraploid) 30.642
CNS0095613Golden flower (tetraploid) 10.985
CNS0095614Golden flower (tetraploid) 20.557
CNS0095615Golden flower (tetraploid) 30.397
CRA001975CRR073297Stem 11.698
CRR073298Stem 20.787
CRR073299Stem 30.876
CRR073300Leaf 10.119
CRR073301Leaf 20.000
CRR073302Leaf 30.807
CRR073303Juvenile bud 10.436
CRR073304Juvenile bud 20.000
CRR073305Juvenile bud 30.109
CRR073306Third green 10.499
CRR073307Third green 20.137
CRR073308Third green 30.879
CRR073309Second white 12.584
CRR073310Second white 23.012
CRR073311Second white 34.868
CRR073312Silver flowering 15.145
CRR073313Silver flowering 22.014
CRR073314Silver flowering 33.343
CRR073315Gold flowering 10.206
CRR073316Gold flowering 20.000
CRR073317Gold flowering 30.128
CRR073318Tawny withering 10.502
CRR073319Tawny withering 21.630
CRR073320Tawny withering 31.413