Detail information of GWHGAAZE001463


Functional Annotation

DatabaseOrthologsE valueAnnotation
NrACB20696.18.16051E-50putative cold-inducible protein [Camellia sinensis]
Swissprottr|Q42410|ZAT12_ARATH8E-28Zinc finger protein ZAT12
trEMBLtr|B2CZY8|B2CZY8_CAMSI3E-50Putative cold-inducible protein {ECO:0000313|EMBL:ACB20696.1}
TAIR10AT2G28710.12E-23C2H2-type zinc finger family protein

Location And Transcript Sequence (JBrowse)

ScaffoldTypeStartEndStrand
GWHAAZE00000001gene4414337844143848+
GWHAAZE00000001mRNA4414337844143848+
GWHAAZE00000001exon4414337844143848+
GWHAAZE00000001CDS4414337844143848+
Transcript Sequence

Network for GWHGAAZE001463

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist


Functional Module

Module IDFunction Annotation


Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF13912.7zf-C2H2_639643.60E-12
PF13912.7zf-C2H2_6861103.00E-09
Protein Sequence

Gene family

Gene familysubfamily
Transcription Factors FamilyC2H2

KEGG pathway

KO Enzyme pathway mapID
--------

Gene Ontology

GO term OntologyName
GO:0003676molecular_functionnucleic acid binding

Expression pattern


Expression pattern detail

SRPSampleDescriptionTPM
SRP075780SRR3591705youngest leaf0.635
SRR3591706second leaf0.429
SRR3591707mature leaf1.067
SRR3591708Shoot apex0.000
SRR3591709Stem2.853
SRR3591710White floral bud0.206
SRR3591711White flower0.000
SRR3591712Green floral bud0.231
SRR3591713Yellow flower0.660
SRP173429 SRR8316895Juvenile bud stage 1.051
SRR8316896Juvenile bud stage 2.282
SRR8316897Juvenile bud stage 0.588
SRR8316894Third green stage 0.280
SRR8316900Third green stage 0.094
SRR8316901Third green stage 0.075
SRR8316898Complete white stage 0.000
SRR8316899Complete white stage 0.000
SRR8316903Complete white stage 0.000
SRR8316902Silver flowering stage0.000
SRR8316904Silver flowering stage0.000
SRR8316905Silver flowering stage0.073
SRR8316906Gold flowering stage 0.309
SRR8316907Gold flowering stage 0.299
SRR8316908Gold flowering stage 0.107
SRP132670SRR6706286Control0.599
SRR6706287Light intensity 50%0.092
SRR6706288Light intensity 20%0.057
CNP0000432CNS0095592Slightly white alabastrum(diploid) 10.906
CNS0095593Slightly white alabastrum(diploid) 20.497
CNS0095594Slightly white alabastrum(diploid) 35.457
CNS0095595Whole white alabastrum(diploid) 20.000
CNS0095596Whole white alabastrum(diploid) 30.000
CNS0095597Whole white alabastrum(diploid) 40.000
CNS0095598Silvery flower (diploied) 10.000
CNS0095599Silvery flower (diploied) 20.249
CNS0095600Silvery flower (diploied) 30.000
CNS0095601Golden flower (diploid) 10.000
CNS0095602Golden flower (diploid) 20.464
CNS0095603Golden flower (diploid) 30.097
CNS0095604Slightly white alabastrum(tetraploid) 10.070
CNS0095605Slightly white alabastrum(tetraploid) 20.022
CNS0095606Slightly white alabastrum(tetraploid) 30.000
CNS0095607Whole white alabastrum(tetraploid) 10.000
CNS0095608Whole white alabastrum(tetraploid) 20.000
CNS0095609Whole white alabastrum(tetraploid) 30.000
CNS0095610Silvery flower (tetraploid) 10.167
CNS0095611Silvery flower (tetraploid) 20.000
CNS0095612Silvery flower (tetraploid) 30.000
CNS0095613Golden flower (tetraploid) 10.269
CNS0095614Golden flower (tetraploid) 20.000
CNS0095615Golden flower (tetraploid) 30.206
CRA001975CRR073297Stem 10.188
CRR073298Stem 20.815
CRR073299Stem 30.100
CRR073300Leaf 10.000
CRR073301Leaf 20.031
CRR073302Leaf 30.000
CRR073303Juvenile bud 10.175
CRR073304Juvenile bud 20.202
CRR073305Juvenile bud 30.000
CRR073306Third green 10.109
CRR073307Third green 20.000
CRR073308Third green 30.166
CRR073309Second white 10.000
CRR073310Second white 20.408
CRR073311Second white 30.000
CRR073312Silver flowering 10.000
CRR073313Silver flowering 20.000
CRR073314Silver flowering 30.000
CRR073315Gold flowering 10.000
CRR073316Gold flowering 20.000
CRR073317Gold flowering 30.000
CRR073318Tawny withering 11.206
CRR073319Tawny withering 21.273
CRR073320Tawny withering 30.000