Detail information of GWHGAAZE001568


Functional Annotation

DatabaseOrthologsE valueAnnotation
NrXP_002299101.14.0093E-59hypothetical protein POPTR_0001s04120g [Populus trichocarpa]
trEMBLtr|B9GLD8|B9GLD8_POPTR1E-59Uncharacterized protein {ECO:0000313|EMBL:EEE83906.1}
TAIR10AT1G55340.13E-40Protein of unknown function (DUF1639)

Location And Transcript Sequence (JBrowse)

ScaffoldTypeStartEndStrand
GWHAAZE00000001gene5236338252365143+
GWHAAZE00000001mRNA5236338252365143+
GWHAAZE00000001exon5236338252363741+
GWHAAZE00000001exon5236428652364363+
GWHAAZE00000001exon5236472552365143+
GWHAAZE00000001CDS5236338252363741+
GWHAAZE00000001CDS5236428652364363+
GWHAAZE00000001CDS5236472552364775+
GWHAAZE00000001three_prime_UTR5236477652365143+
Transcript Sequence

Network for GWHGAAZE001568

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist


Functional Module

Module IDFunction Annotation
CFinderModule0009


Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF07797.15DUF1639871366.50E-24
Protein Sequence

Gene family

Gene familysubfamily
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KEGG pathway

KO Enzyme pathway mapID
--------

Gene Ontology

GO term OntologyName

Expression pattern


Expression pattern detail

SRPSampleDescriptionTPM
SRP075780SRR3591705youngest leaf25.445
SRR3591706second leaf23.482
SRR3591707mature leaf20.636
SRR3591708Shoot apex26.567
SRR3591709Stem32.478
SRR3591710White floral bud21.177
SRR3591711White flower32.811
SRR3591712Green floral bud24.706
SRR3591713Yellow flower42.498
SRP173429 SRR8316895Juvenile bud stage 8.750
SRR8316896Juvenile bud stage 13.745
SRR8316897Juvenile bud stage 5.358
SRR8316894Third green stage 5.148
SRR8316900Third green stage 10.105
SRR8316901Third green stage 14.004
SRR8316898Complete white stage 3.171
SRR8316899Complete white stage 11.478
SRR8316903Complete white stage 6.418
SRR8316902Silver flowering stage3.955
SRR8316904Silver flowering stage5.211
SRR8316905Silver flowering stage3.238
SRR8316906Gold flowering stage 13.190
SRR8316907Gold flowering stage 12.151
SRR8316908Gold flowering stage 16.071
SRP132670SRR6706286Control4.736
SRR6706287Light intensity 50%6.715
SRR6706288Light intensity 20%6.233
CNP0000432CNS0095592Slightly white alabastrum(diploid) 112.453
CNS0095593Slightly white alabastrum(diploid) 211.980
CNS0095594Slightly white alabastrum(diploid) 313.537
CNS0095595Whole white alabastrum(diploid) 27.388
CNS0095596Whole white alabastrum(diploid) 35.621
CNS0095597Whole white alabastrum(diploid) 49.321
CNS0095598Silvery flower (diploied) 18.502
CNS0095599Silvery flower (diploied) 210.174
CNS0095600Silvery flower (diploied) 38.181
CNS0095601Golden flower (diploid) 19.909
CNS0095602Golden flower (diploid) 27.987
CNS0095603Golden flower (diploid) 37.095
CNS0095604Slightly white alabastrum(tetraploid) 119.893
CNS0095605Slightly white alabastrum(tetraploid) 219.017
CNS0095606Slightly white alabastrum(tetraploid) 334.246
CNS0095607Whole white alabastrum(tetraploid) 115.005
CNS0095608Whole white alabastrum(tetraploid) 214.879
CNS0095609Whole white alabastrum(tetraploid) 322.172
CNS0095610Silvery flower (tetraploid) 126.932
CNS0095611Silvery flower (tetraploid) 218.349
CNS0095612Silvery flower (tetraploid) 320.616
CNS0095613Golden flower (tetraploid) 132.720
CNS0095614Golden flower (tetraploid) 227.743
CNS0095615Golden flower (tetraploid) 320.025
CRA001975CRR073297Stem 110.542
CRR073298Stem 211.274
CRR073299Stem 36.717
CRR073300Leaf 17.094
CRR073301Leaf 27.910
CRR073302Leaf 36.090
CRR073303Juvenile bud 16.236
CRR073304Juvenile bud 25.184
CRR073305Juvenile bud 35.536
CRR073306Third green 11.718
CRR073307Third green 21.579
CRR073308Third green 32.084
CRR073309Second white 11.294
CRR073310Second white 22.555
CRR073311Second white 31.982
CRR073312Silver flowering 13.039
CRR073313Silver flowering 22.382
CRR073314Silver flowering 35.319
CRR073315Gold flowering 14.450
CRR073316Gold flowering 24.307
CRR073317Gold flowering 32.264
CRR073318Tawny withering 14.018
CRR073319Tawny withering 26.347
CRR073320Tawny withering 34.145