Detail information of GWHGAAZE001631


Functional Annotation

DatabaseOrthologsE valueAnnotation
NrKHG06298.16.82038E-50hypothetical protein F383_32258 [Gossypium arboreum]
trEMBLtr|A0A059AEX9|A0A059AEX9_EUCGR8E-49Uncharacterized protein {ECO:0000313|EMBL:KCW52388.1}
TAIR10AT5G19860.11E-33Protein of unknown function, DUF538

Location And Transcript Sequence (JBrowse)

ScaffoldTypeStartEndStrand
GWHAAZE00000001gene5518869655189121-
GWHAAZE00000001mRNA5518869655189121-
GWHAAZE00000001exon5518869655189121-
GWHAAZE00000001CDS5518869655189121-
Transcript Sequence

Network for GWHGAAZE001631

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist


Functional Module

Module IDFunction Annotation
CFinderModule0278


Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF04398.13DUF53881165.00E-27
Protein Sequence

Gene family

Gene familysubfamily
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KEGG pathway

KO Enzyme pathway mapID
--------

Gene Ontology

GO term OntologyName

Expression pattern


Expression pattern detail

SRPSampleDescriptionTPM
SRP075780SRR3591705youngest leaf5.285
SRR3591706second leaf16.410
SRR3591707mature leaf10.819
SRR3591708Shoot apex12.489
SRR3591709Stem32.141
SRR3591710White floral bud9.855
SRR3591711White flower14.475
SRR3591712Green floral bud3.085
SRR3591713Yellow flower0.007
SRP173429 SRR8316895Juvenile bud stage 3.887
SRR8316896Juvenile bud stage 1.355
SRR8316897Juvenile bud stage 0.000
SRR8316894Third green stage 1.591
SRR8316900Third green stage 0.303
SRR8316901Third green stage 0.000
SRR8316898Complete white stage 0.000
SRR8316899Complete white stage 1.818
SRR8316903Complete white stage 2.653
SRR8316902Silver flowering stage0.000
SRR8316904Silver flowering stage0.000
SRR8316905Silver flowering stage0.000
SRR8316906Gold flowering stage 0.000
SRR8316907Gold flowering stage 0.000
SRR8316908Gold flowering stage 0.000
SRP132670SRR6706286Control1.230
SRR6706287Light intensity 50%1.914
SRR6706288Light intensity 20%1.449
CNP0000432CNS0095592Slightly white alabastrum(diploid) 14.974
CNS0095593Slightly white alabastrum(diploid) 20.714
CNS0095594Slightly white alabastrum(diploid) 32.438
CNS0095595Whole white alabastrum(diploid) 23.064
CNS0095596Whole white alabastrum(diploid) 30.000
CNS0095597Whole white alabastrum(diploid) 41.467
CNS0095598Silvery flower (diploied) 123.542
CNS0095599Silvery flower (diploied) 29.043
CNS0095600Silvery flower (diploied) 32.887
CNS0095601Golden flower (diploid) 110.218
CNS0095602Golden flower (diploid) 27.868
CNS0095603Golden flower (diploid) 36.282
CNS0095604Slightly white alabastrum(tetraploid) 18.045
CNS0095605Slightly white alabastrum(tetraploid) 21.433
CNS0095606Slightly white alabastrum(tetraploid) 337.350
CNS0095607Whole white alabastrum(tetraploid) 19.137
CNS0095608Whole white alabastrum(tetraploid) 20.000
CNS0095609Whole white alabastrum(tetraploid) 30.000
CNS0095610Silvery flower (tetraploid) 10.000
CNS0095611Silvery flower (tetraploid) 28.793
CNS0095612Silvery flower (tetraploid) 30.879
CNS0095613Golden flower (tetraploid) 10.000
CNS0095614Golden flower (tetraploid) 20.119
CNS0095615Golden flower (tetraploid) 30.000
CRA001975CRR073297Stem 16.174
CRR073298Stem 25.143
CRR073299Stem 310.461
CRR073300Leaf 10.383
CRR073301Leaf 20.928
CRR073302Leaf 30.213
CRR073303Juvenile bud 10.296
CRR073304Juvenile bud 20.000
CRR073305Juvenile bud 30.172
CRR073306Third green 10.000
CRR073307Third green 20.000
CRR073308Third green 30.000
CRR073309Second white 10.000
CRR073310Second white 20.000
CRR073311Second white 30.000
CRR073312Silver flowering 10.000
CRR073313Silver flowering 20.232
CRR073314Silver flowering 30.000
CRR073315Gold flowering 19.520
CRR073316Gold flowering 218.967
CRR073317Gold flowering 323.867
CRR073318Tawny withering 11.707
CRR073319Tawny withering 20.385
CRR073320Tawny withering 34.789