Detail information of GWHGAAZE001721


Functional Annotation

DatabaseOrthologsE valueAnnotation
NrXP_008386263.10PREDICTED: alpha-1,3/1,6-mannosyltransferase ALG2 [Malus domestica]
Swissprottr|Q9XEE9|ALG11_ARATH0.000000001GDP-Man:Man(3)GlcNAc(2)-PP-Dol alpha-1,2-mannosyltransferase
trEMBLtr|A0A067KII3|A0A067KII3_JATCU0Uncharacterized protein {ECO:0000313|EMBL:KDP34793.1}
TAIR10AT1G78800.17E-180UDP-Glycosyltransferase superfamily protein

Location And Transcript Sequence (JBrowse)

ScaffoldTypeStartEndStrand
GWHAAZE00000001gene5869133158697233-
GWHAAZE00000001mRNA5869133158697233-
GWHAAZE00000001exon5869717358697233-
GWHAAZE00000001exon5869348258693598-
GWHAAZE00000001exon5869314358693336-
GWHAAZE00000001exon5869295358693058-
GWHAAZE00000001exon5869273258692855-
GWHAAZE00000001exon5869244458692550-
GWHAAZE00000001exon5869172658691892-
GWHAAZE00000001exon5869133158691627-
GWHAAZE00000001CDS5869717358697233-
GWHAAZE00000001CDS5869348258693598-
GWHAAZE00000001CDS5869314358693336-
GWHAAZE00000001CDS5869295358693058-
GWHAAZE00000001CDS5869273258692855-
GWHAAZE00000001CDS5869244458692550-
GWHAAZE00000001CDS5869172658691892-
GWHAAZE00000001CDS5869133158691627-
Transcript Sequence

Network for GWHGAAZE001721

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist


Functional Module

Module IDFunction Annotation


Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF00534.21Glycos_transf_12003612.70E-38
PF12799.8LRR_41742152.50E-06
Protein Sequence

Gene family

Gene familysubfamily
----

KEGG pathway

KO Enzyme pathway mapID
K03843ALG2 Metabolic pathways map01100
N-Glycan biosynthesismap00510
Various types of N-glycan biosynthesismap00513

Gene Ontology

GO term OntologyName

Expression pattern


Expression pattern detail

SRPSampleDescriptionTPM
SRP075780SRR3591705youngest leaf18.896
SRR3591706second leaf11.852
SRR3591707mature leaf7.788
SRR3591708Shoot apex15.457
SRR3591709Stem19.313
SRR3591710White floral bud16.453
SRR3591711White flower18.319
SRR3591712Green floral bud19.024
SRR3591713Yellow flower14.869
SRP173429 SRR8316895Juvenile bud stage 10.982
SRR8316896Juvenile bud stage 14.742
SRR8316897Juvenile bud stage 6.330
SRR8316894Third green stage 5.658
SRR8316900Third green stage 16.100
SRR8316901Third green stage 18.162
SRR8316898Complete white stage 8.568
SRR8316899Complete white stage 26.577
SRR8316903Complete white stage 11.033
SRR8316902Silver flowering stage9.681
SRR8316904Silver flowering stage11.234
SRR8316905Silver flowering stage6.275
SRR8316906Gold flowering stage 19.418
SRR8316907Gold flowering stage 17.993
SRR8316908Gold flowering stage 19.156
SRP132670SRR6706286Control11.366
SRR6706287Light intensity 50%10.928
SRR6706288Light intensity 20%12.436
CNP0000432CNS0095592Slightly white alabastrum(diploid) 114.925
CNS0095593Slightly white alabastrum(diploid) 213.140
CNS0095594Slightly white alabastrum(diploid) 312.352
CNS0095595Whole white alabastrum(diploid) 212.048
CNS0095596Whole white alabastrum(diploid) 314.025
CNS0095597Whole white alabastrum(diploid) 410.974
CNS0095598Silvery flower (diploied) 112.988
CNS0095599Silvery flower (diploied) 211.380
CNS0095600Silvery flower (diploied) 315.778
CNS0095601Golden flower (diploid) 19.887
CNS0095602Golden flower (diploid) 215.116
CNS0095603Golden flower (diploid) 314.833
CNS0095604Slightly white alabastrum(tetraploid) 114.185
CNS0095605Slightly white alabastrum(tetraploid) 212.638
CNS0095606Slightly white alabastrum(tetraploid) 317.944
CNS0095607Whole white alabastrum(tetraploid) 19.473
CNS0095608Whole white alabastrum(tetraploid) 29.816
CNS0095609Whole white alabastrum(tetraploid) 314.407
CNS0095610Silvery flower (tetraploid) 116.456
CNS0095611Silvery flower (tetraploid) 214.359
CNS0095612Silvery flower (tetraploid) 313.079
CNS0095613Golden flower (tetraploid) 111.451
CNS0095614Golden flower (tetraploid) 213.952
CNS0095615Golden flower (tetraploid) 316.115
CRA001975CRR073297Stem 115.414
CRR073298Stem 213.108
CRR073299Stem 310.941
CRR073300Leaf 111.622
CRR073301Leaf 213.378
CRR073302Leaf 38.601
CRR073303Juvenile bud 112.235
CRR073304Juvenile bud 28.496
CRR073305Juvenile bud 310.920
CRR073306Third green 17.089
CRR073307Third green 26.971
CRR073308Third green 37.360
CRR073309Second white 18.247
CRR073310Second white 27.044
CRR073311Second white 38.332
CRR073312Silver flowering 18.326
CRR073313Silver flowering 27.058
CRR073314Silver flowering 38.248
CRR073315Gold flowering 15.866
CRR073316Gold flowering 28.480
CRR073317Gold flowering 36.096
CRR073318Tawny withering 19.830
CRR073319Tawny withering 213.987
CRR073320Tawny withering 313.526