Detail information of GWHGAAZE001730


Functional Annotation

DatabaseOrthologsE valueAnnotation
NrKHG17267.11.51531E-12Differentially expressed in FDCP 6 [Gossypium arboreum]
trEMBLtr|K4BZG1|K4BZG1_SOLLC6E-15Uncharacterized protein {ECO:0000313|EnsemblPlants:Solyc05g021110.2.1}
TAIR10AT2G30880.21E-11Pleckstrin homology (PH) domain-containing protein

Location And Transcript Sequence (JBrowse)

ScaffoldTypeStartEndStrand
GWHAAZE00000001gene5889305758893370-
GWHAAZE00000001mRNA5889305758893370-
GWHAAZE00000001exon5889305758893251-
GWHAAZE00000001exon5889334458893370-
GWHAAZE00000001CDS5889334458893370-
GWHAAZE00000001CDS5889305758893251-
Transcript Sequence

Network for GWHGAAZE001730

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist


Functional Module

Module IDFunction Annotation


Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
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Protein Sequence

Gene family

Gene familysubfamily
----

KEGG pathway

KO Enzyme pathway mapID
K15601KDM3 Thermogenesis map04714

Gene Ontology

GO term OntologyName

Expression pattern


Expression pattern detail

SRPSampleDescriptionTPM
SRP075780SRR3591705youngest leaf18.926
SRR3591706second leaf10.825
SRR3591707mature leaf12.283
SRR3591708Shoot apex8.913
SRR3591709Stem15.167
SRR3591710White floral bud25.841
SRR3591711White flower28.657
SRR3591712Green floral bud12.587
SRR3591713Yellow flower18.103
SRP173429 SRR8316895Juvenile bud stage 8.954
SRR8316896Juvenile bud stage 17.183
SRR8316897Juvenile bud stage 7.056
SRR8316894Third green stage 4.877
SRR8316900Third green stage 14.902
SRR8316901Third green stage 12.673
SRR8316898Complete white stage 8.959
SRR8316899Complete white stage 22.615
SRR8316903Complete white stage 20.532
SRR8316902Silver flowering stage11.395
SRR8316904Silver flowering stage20.677
SRR8316905Silver flowering stage10.374
SRR8316906Gold flowering stage 27.308
SRR8316907Gold flowering stage 23.699
SRR8316908Gold flowering stage 33.505
SRP132670SRR6706286Control1.963
SRR6706287Light intensity 50%1.989
SRR6706288Light intensity 20%3.047
CNP0000432CNS0095592Slightly white alabastrum(diploid) 19.278
CNS0095593Slightly white alabastrum(diploid) 27.633
CNS0095594Slightly white alabastrum(diploid) 36.276
CNS0095595Whole white alabastrum(diploid) 29.851
CNS0095596Whole white alabastrum(diploid) 37.015
CNS0095597Whole white alabastrum(diploid) 48.334
CNS0095598Silvery flower (diploied) 112.488
CNS0095599Silvery flower (diploied) 26.566
CNS0095600Silvery flower (diploied) 321.206
CNS0095601Golden flower (diploid) 16.613
CNS0095602Golden flower (diploid) 222.470
CNS0095603Golden flower (diploid) 320.263
CNS0095604Slightly white alabastrum(tetraploid) 19.927
CNS0095605Slightly white alabastrum(tetraploid) 27.902
CNS0095606Slightly white alabastrum(tetraploid) 316.641
CNS0095607Whole white alabastrum(tetraploid) 18.811
CNS0095608Whole white alabastrum(tetraploid) 25.862
CNS0095609Whole white alabastrum(tetraploid) 310.937
CNS0095610Silvery flower (tetraploid) 119.791
CNS0095611Silvery flower (tetraploid) 226.702
CNS0095612Silvery flower (tetraploid) 336.976
CNS0095613Golden flower (tetraploid) 115.337
CNS0095614Golden flower (tetraploid) 220.871
CNS0095615Golden flower (tetraploid) 331.067
CRA001975CRR073297Stem 15.354
CRR073298Stem 25.303
CRR073299Stem 32.545
CRR073300Leaf 13.791
CRR073301Leaf 25.134
CRR073302Leaf 31.477
CRR073303Juvenile bud 12.594
CRR073304Juvenile bud 23.086
CRR073305Juvenile bud 33.693
CRR073306Third green 14.221
CRR073307Third green 25.001
CRR073308Third green 33.804
CRR073309Second white 13.689
CRR073310Second white 26.427
CRR073311Second white 39.344
CRR073312Silver flowering 14.209
CRR073313Silver flowering 25.912
CRR073314Silver flowering 33.467
CRR073315Gold flowering 12.634
CRR073316Gold flowering 23.037
CRR073317Gold flowering 31.953
CRR073318Tawny withering 12.190
CRR073319Tawny withering 21.553
CRR073320Tawny withering 33.374