Gene detail

Detail information of GWHGAAZE001845

Functional Annotation

Database	Orthologs	E value	Annotation
Nr	XP_009617254.1	0	PREDICTED: cytochrome P450 CYP72A219-like [Nicotiana tomentosiformis]
COG	YP_003706560.1	3E-56	cytochrome P450
Swissprot	tr\|H2DH21\|C7A29_PANGI	0	Cytochrome P450 CYP72A219
trEMBL	tr\|A9ZT56\|A9ZT56_COPJA	0	Cytochrome P450 {ECO:0000313\|EMBL:BAF98466.1}
TAIR10	AT3G14690.1	2E-173	cytochrome P450, family 72, subfamily A, polypeptide 15

Location And Transcript Sequence (JBrowse)

Scaffold	Type	Start	End	Strand
GWHAAZE00000001	gene	62536835	62545361	-
GWHAAZE00000001	mRNA	62536835	62545361	-
GWHAAZE00000001	exon	62545082	62545361	-
GWHAAZE00000001	exon	62539899	62540116	-
GWHAAZE00000001	exon	62538981	62539225	-
GWHAAZE00000001	exon	62537607	62537991	-
GWHAAZE00000001	exon	62536835	62537260	-
GWHAAZE00000001	CDS	62545082	62545361	-
GWHAAZE00000001	CDS	62539899	62540116	-
GWHAAZE00000001	CDS	62538981	62539225	-
GWHAAZE00000001	CDS	62537607	62537991	-
GWHAAZE00000001	CDS	62536835	62537260	-

Transcript Sequence
>GWHTAAZE001849 ATGGAGAAAGATCTAGTGTACAACACAATAGGGATCTCTTGTGCTATTGCACTTGTACTTTGTGCATGGAGAGTGGTAAATTGGGTGTGGTTAAGGCCAAAGAAGCTGGAGAAGTGCCTCAGAGAGCAAGGGCTTAAGGGAAACTCCTACAAAGTCTTGTTTGGAGACATGAAAATGGTCACTACACTTATCAAAGAAGCAAAGTCCAAGCCGACAGATCTCTCCCATGATGTTGTGCCACGGGTCATGCCTTGGGTTCATGAATCCATCAAGAACCATGGTAATAATTTTTTCCTATGGTTTGGGACAACACCAAGGGTGCACATCAAGGACCCTGAACTTATAAAGGATGTCTTGAATAAGTATCAAAATTTTCAAAAGCTAAAGCCAAATCCACTAGTCAAGTTGTTGTCAAATGGACTAGCAAGCCATGAGGGGGAGCAATGGGCCAAACACAGAAAAATTATTAACCCTGCTTTTCATTTAGAGAGATTGAAGTTTATGCTACCGGCATGTTATTCGAGTTGTAGTGAAATGATGAGCAAATGGGAGAAGATGGTCTCAGTAAATGGCTCGTCCGAGTTGGATGTGTGGCCTTATCTAGAAACTTTAACTAGTTACATAATTTCACGTACGGCATTTGACAGTAGTTATGAAGAAGGGAGAAGGATATTTCAACTTCAAGAAGAACAAATTAAGCTTGCTGTCCAAGCTGCACTATCAATTTACATACCCGGATTGTGGTATTTTCCAACAAAGAGGAACAAGAGAATGAAAGAGATTGACAAAGAAGTGCACGTTTCACTACGACGTATTGTTGAAAAGAAAATAGACGCAATGAAAAACGGAGAAACTAGAAATGATGATTTGTTGGGGATATTATTGGAATCAAATTTCAAAGAAGTTCAAGAACAAGGAAATAAGAGTTCAGGAATGAGTATTACAGAGGTAATGGAAGAGTGCAAGGTATTCTACTTTGCCGGGCATGAGACCACCTCGAGTTTGTTGGTGTGGACAATGATTTTGTTATGCATGCATCCGAACTGGCAAATACGTGCTAGAGAAGAAGTTTTACGAGTATTTGGGAATGACAAACCAGATTTTGATGGGTTAAGTCGTTTGAAAGTGGTGACTACGATTTTGTACGAGGTTTTAAGGTTGTACCCACCAATAGTTGCATTATCTCGAACTGTTAACAAGGAGACTACTTTAGGAGACATATCTCTACCACAAGGTGTACAAGTCACAATGCCCATAATGCTAATTCACCGCGATTATGATCTATGGGGCGAGGATGCAAATGAGTTCAAACCAGAGAGATTTTCTGAAGGAGTATCAAAGGCGGCAAAGAACCATGTCTCGTTCTTTCCATTTGGTTGGGGCCCCCGAATATGTATTGGACAAAACTTTGCGATGCTGGAAGCGAAAATGACTATGGTTATGATTTTGCAGCGCTTCTCTTTCGAGCTTTCTTCCTCATATGTGCATGCTCCTTCCACTGTCATGATCCTTCAACCCCAACATGGTGCTCAGATAATTCTGCACAAGCTGTAG

Network for GWHGAAZE001845

Network category	Network	Top300 PCC genelist
Coexpression Positive	Network	Top300 PCC genelist
Coexpression Negative	Network	Top300 PCC genelist

Functional Module

Module ID	Function Annotation

Protein Structure

Pfam accession	Pfam name	Alignment start	Alignment end	E-value
PF00067.23	p450	91	512	6.10E-88
PF00753.28	Lactamase_B	228	348	3.40E-08

Protein Sequence

Gene family

Gene family	subfamily
--	--

KEGG pathway

KO	Enzyme	pathway	mapID
--	--	--	--

Gene Ontology

GO term	Ontology	Name
GO:0055114	biological_process	oxidation-reduction process
GO:0005506	molecular_function	iron ion binding
GO:0016705	molecular_function	oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen
GO:0020037	molecular_function	heme binding

Expression pattern

Expression pattern detail

SRP	Sample	Description	TPM
SRP075780	SRR3591705	youngest leaf	106.166
	SRR3591706	second leaf	10.264
	SRR3591707	mature leaf	9.664
	SRR3591708	Shoot apex	32.379
	SRR3591709	Stem	94.716
	SRR3591710	White floral bud	14.666
	SRR3591711	White flower	18.195
	SRR3591712	Green floral bud	12.193
	SRR3591713	Yellow flower	1.271
SRP173429	SRR8316895	Juvenile bud stage	19.406
	SRR8316896	Juvenile bud stage	26.512
	SRR8316897	Juvenile bud stage	12.824
	SRR8316894	Third green stage	15.163
	SRR8316900	Third green stage	47.975
	SRR8316901	Third green stage	42.229
	SRR8316898	Complete white stage	34.458
	SRR8316899	Complete white stage	93.051
	SRR8316903	Complete white stage	61.750
	SRR8316902	Silver flowering stage	29.164
	SRR8316904	Silver flowering stage	46.205
	SRR8316905	Silver flowering stage	20.569
	SRR8316906	Gold flowering stage	55.256
	SRR8316907	Gold flowering stage	42.137
	SRR8316908	Gold flowering stage	43.756
SRP132670	SRR6706286	Control	62.610
	SRR6706287	Light intensity 50%	61.849
	SRR6706288	Light intensity 20%	65.338
CNP0000432	CNS0095592	Slightly white alabastrum(diploid) 1	33.682
	CNS0095593	Slightly white alabastrum(diploid) 2	47.486
	CNS0095594	Slightly white alabastrum(diploid) 3	26.659
	CNS0095595	Whole white alabastrum(diploid) 2	47.728
	CNS0095596	Whole white alabastrum(diploid) 3	38.881
	CNS0095597	Whole white alabastrum(diploid) 4	46.886
	CNS0095598	Silvery flower (diploied) 1	75.968
	CNS0095599	Silvery flower (diploied) 2	82.699
	CNS0095600	Silvery flower (diploied) 3	115.616
	CNS0095601	Golden flower (diploid) 1	76.771
	CNS0095602	Golden flower (diploid) 2	94.738
	CNS0095603	Golden flower (diploid) 3	88.208
	CNS0095604	Slightly white alabastrum(tetraploid) 1	55.660
	CNS0095605	Slightly white alabastrum(tetraploid) 2	42.370
	CNS0095606	Slightly white alabastrum(tetraploid) 3	155.421
	CNS0095607	Whole white alabastrum(tetraploid) 1	31.270
	CNS0095608	Whole white alabastrum(tetraploid) 2	24.513
	CNS0095609	Whole white alabastrum(tetraploid) 3	72.698
	CNS0095610	Silvery flower (tetraploid) 1	28.465
	CNS0095611	Silvery flower (tetraploid) 2	34.173
	CNS0095612	Silvery flower (tetraploid) 3	16.504
	CNS0095613	Golden flower (tetraploid) 1	8.540
	CNS0095614	Golden flower (tetraploid) 2	19.767
	CNS0095615	Golden flower (tetraploid) 3	3.448
CRA001975	CRR073297	Stem 1	15.209
	CRR073298	Stem 2	14.940
	CRR073299	Stem 3	12.586
	CRR073300	Leaf 1	40.651
	CRR073301	Leaf 2	31.254
	CRR073302	Leaf 3	24.902
	CRR073303	Juvenile bud 1	53.983
	CRR073304	Juvenile bud 2	57.574
	CRR073305	Juvenile bud 3	55.647
	CRR073306	Third green 1	22.097
	CRR073307	Third green 2	16.535
	CRR073308	Third green 3	19.134
	CRR073309	Second white 1	3.424
	CRR073310	Second white 2	9.471
	CRR073311	Second white 3	4.877
	CRR073312	Silver flowering 1	3.146
	CRR073313	Silver flowering 2	4.966
	CRR073314	Silver flowering 3	4.685
	CRR073315	Gold flowering 1	16.824
	CRR073316	Gold flowering 2	22.527
	CRR073317	Gold flowering 3	8.813
	CRR073318	Tawny withering 1	21.411
	CRR073319	Tawny withering 2	24.943
	CRR073320	Tawny withering 3	17.856