Gene detail

Detail information of GWHGAAZE002046

Functional Annotation

Database	Orthologs	E value	Annotation
Nr	EYU30767.1	0	hypothetical protein MIMGU_mgv1a006861mg [Erythranthe guttata]
COG	YP_001100500.1	4E-92	aromatic amino acid aminotransferase
Swissprot	tr\|P46643\|AAT1_ARATH	0	Aspartate aminotransferase, mitochondrial (Precursor)
trEMBL	tr\|A0A022QPY9\|A0A022QPY9_ERYGU	0	Aspartate aminotransferase {ECO:0000256\|RuleBase:RU000480}
TAIR10	AT2G30970.2	1E-177	aspartate aminotransferase 1

Location And Transcript Sequence (JBrowse)

Scaffold	Type	Start	End	Strand
GWHAAZE00000001	gene	67808987	67815156	+
GWHAAZE00000001	mRNA	67808987	67815156	+
GWHAAZE00000001	exon	67808987	67809180	+
GWHAAZE00000001	exon	67809617	67809722	+
GWHAAZE00000001	exon	67809867	67809971	+
GWHAAZE00000001	exon	67810051	67810223	+
GWHAAZE00000001	exon	67810745	67810904	+
GWHAAZE00000001	exon	67814116	67814211	+
GWHAAZE00000001	exon	67814337	67814431	+
GWHAAZE00000001	exon	67814833	67815156	+
GWHAAZE00000001	CDS	67808987	67809180	+
GWHAAZE00000001	CDS	67809617	67809722	+
GWHAAZE00000001	CDS	67809867	67809971	+
GWHAAZE00000001	CDS	67810051	67810223	+
GWHAAZE00000001	CDS	67810745	67810904	+
GWHAAZE00000001	CDS	67814116	67814211	+
GWHAAZE00000001	CDS	67814337	67814431	+
GWHAAZE00000001	CDS	67814833	67814905	+
GWHAAZE00000001	three_prime_UTR	67814906	67815156	+

Transcript Sequence
>GWHTAAZE002050 ATGGGAGGAAGTGTGAAGATGGTTGAGGAAACGTTGAAGCTGGCCTATGGGGAGAACTCTGACTTGATCAAAGATAAGCGGATTGCGGCGGTGCAAGCTCTTTCTGGCACTGGTGCATGCCGACTTTTTGCGGACTTTCAAAAGCGGTTTTGTCCTGATTCCCAAATCTACATTCCAGTCCCCACCTGGTCCAATCATCATAACATATGGAGAGATGCTCACGTACCTCAGAGGACCTTCCACTATTATCATCCAGAATCAAAAGGATTGGATTTTGCTTCGCTGATGGATGACGTAAAGAATGCGCCAAATGGGTCATTTTTTCTTCTTCATGCTTGCGCACATAATCCTACTGGAGTGGATCCTACAGAGGAACAATGGAGAGAGATCTCTTACCAGTTCAAGGTTAAAGGCCATTTTGCTTTCTTTGACATGGCATATCAAGGTTTTGCGAGTGGTGATCCAGAGAGGGATGCAAAATCCATCAGAATTTTTCTTGAGGATGGTCATCTAATTGGATGTTCCCAATCATATGCCAAAAATATGGGACTTTATGGCCAGAGAGTTGGGTGTCTCAGTGTGGTTTGTGATGATGAGAAGCAAGCTGTGGCAGTGAAAAGTCAGTTGCAGCAGCTTGCCAGACCAATGTACAGCAATCCACCTGTTCATGGTGCACTCGTTGTTTCGACTATCCTTGGTGATCCAGACTTGAAGAATCTGTGGCTCAAGGAAGTTAAGGGCATGGCTGAACGTATAATTGGAATGAGAACCGCTCTTCGTGAAAACCTTGAGAATTTAGGGTCACCCTTGTCATGGGAGCACATTACTAATCAGATCGGCATGTTTTGCTATAGTGGGATGACACCTGAACAAGTTGATCGCTTGACAAAAGAATTCCATATTTACATGACCCGTAACGGCCGTATTAGTATGGCAGGAGTTACTACCGGCAACGTTGGATACTTGGCGAGTGCAATTAATGAGGTCACAAAATCTTCGTAGGGGGACTCATCCTACCAGAATGTTTACAGCAGCTAATAAGAAAAATAAAGCAGGTGATGATAAAAATATATACATAAGGCCTCGGTGCATTTTTTCCCCACCAACCGAGAACAATTTTCTGTTTCTTCCATAAGCGCGAAGAAAGTTAAACATTATATACTGTTGTAACAGGGGTTTGTAATTTTAGATCATGTCTTGTTCTTTTACATTAGATGTTTGAGGACTGCAGTTGGTGCTTAATAATTTAACGG

Network for GWHGAAZE002046

Network category	Network	Top300 PCC genelist
Coexpression Positive	Network	Top300 PCC genelist
Coexpression Negative	Network	Top300 PCC genelist

Functional Module

Module ID	Function Annotation
CFinderModule0219

Protein Structure

Pfam accession	Pfam name	Alignment start	Alignment end	E-value
PF00155.22	Aminotran_1_2	5	326	5.40E-78
PF13881.7	Rad60-SLD_2	5	116	7.70E-43

Protein Sequence

Gene family

Gene family	subfamily
--	--

KEGG pathway

KO	Enzyme	pathway	mapID
K14455	GOT2	Metabolic pathways	map01100
		Biosynthesis of secondary metabolites	map01110
		Microbial metabolism in diverse environments	map01120
		Carbon metabolism	map01200
		2-Oxocarboxylic acid metabolism	map01210
		Biosynthesis of amino acids	map01230
		Carbon fixation in photosynthetic organisms	map00710
		Alanine, aspartate and glutamate metabolism	map00250
		Cysteine and methionine metabolism	map00270
		Arginine biosynthesis	map00220
		Arginine and proline metabolism	map00330
		Tyrosine metabolism	map00350
		Phenylalanine metabolism	map00360
		Phenylalanine, tyrosine and tryptophan biosynthesis	map00400
		Isoquinoline alkaloid biosynthesis	map00950
		Tropane, piperidine and pyridine alkaloid biosynthesis	map00960
		Fat digestion and absorption	map04975

Gene Ontology

GO term	Ontology	Name
GO:0009058	biological_process	biosynthetic process
GO:0006520	biological_process	cellular amino acid metabolic process
GO:0003824	molecular_function	catalytic activity
GO:0030170	molecular_function	pyridoxal phosphate binding
GO:0008483	molecular_function	transaminase activity
GO:0005515	molecular_function	protein binding

Expression pattern

Expression pattern detail

SRP	Sample	Description	TPM
SRP075780	SRR3591705	youngest leaf	46.245
	SRR3591706	second leaf	56.217
	SRR3591707	mature leaf	30.605
	SRR3591708	Shoot apex	27.442
	SRR3591709	Stem	29.692
	SRR3591710	White floral bud	42.630
	SRR3591711	White flower	86.208
	SRR3591712	Green floral bud	63.081
	SRR3591713	Yellow flower	137.488
SRP173429	SRR8316895	Juvenile bud stage	21.182
	SRR8316896	Juvenile bud stage	29.810
	SRR8316897	Juvenile bud stage	14.825
	SRR8316894	Third green stage	16.501
	SRR8316900	Third green stage	86.986
	SRR8316901	Third green stage	62.320
	SRR8316898	Complete white stage	53.985
	SRR8316899	Complete white stage	72.333
	SRR8316903	Complete white stage	52.590
	SRR8316902	Silver flowering stage	62.724
	SRR8316904	Silver flowering stage	86.732
	SRR8316905	Silver flowering stage	42.611
	SRR8316906	Gold flowering stage	214.468
	SRR8316907	Gold flowering stage	201.475
	SRR8316908	Gold flowering stage	171.092
SRP132670	SRR6706286	Control	49.944
	SRR6706287	Light intensity 50%	56.651
	SRR6706288	Light intensity 20%	58.761
CNP0000432	CNS0095592	Slightly white alabastrum(diploid) 1	28.492
	CNS0095593	Slightly white alabastrum(diploid) 2	50.625
	CNS0095594	Slightly white alabastrum(diploid) 3	31.912
	CNS0095595	Whole white alabastrum(diploid) 2	42.586
	CNS0095596	Whole white alabastrum(diploid) 3	43.240
	CNS0095597	Whole white alabastrum(diploid) 4	42.235
	CNS0095598	Silvery flower (diploied) 1	49.292
	CNS0095599	Silvery flower (diploied) 2	63.222
	CNS0095600	Silvery flower (diploied) 3	138.451
	CNS0095601	Golden flower (diploid) 1	61.471
	CNS0095602	Golden flower (diploid) 2	158.357
	CNS0095603	Golden flower (diploid) 3	151.450
	CNS0095604	Slightly white alabastrum(tetraploid) 1	36.732
	CNS0095605	Slightly white alabastrum(tetraploid) 2	33.461
	CNS0095606	Slightly white alabastrum(tetraploid) 3	53.007
	CNS0095607	Whole white alabastrum(tetraploid) 1	28.072
	CNS0095608	Whole white alabastrum(tetraploid) 2	32.413
	CNS0095609	Whole white alabastrum(tetraploid) 3	77.131
	CNS0095610	Silvery flower (tetraploid) 1	99.282
	CNS0095611	Silvery flower (tetraploid) 2	111.920
	CNS0095612	Silvery flower (tetraploid) 3	128.569
	CNS0095613	Golden flower (tetraploid) 1	109.509
	CNS0095614	Golden flower (tetraploid) 2	112.313
	CNS0095615	Golden flower (tetraploid) 3	47.683
CRA001975	CRR073297	Stem 1	26.993
	CRR073298	Stem 2	23.542
	CRR073299	Stem 3	25.762
	CRR073300	Leaf 1	53.941
	CRR073301	Leaf 2	47.637
	CRR073302	Leaf 3	59.010
	CRR073303	Juvenile bud 1	96.341
	CRR073304	Juvenile bud 2	122.289
	CRR073305	Juvenile bud 3	77.985
	CRR073306	Third green 1	60.584
	CRR073307	Third green 2	46.803
	CRR073308	Third green 3	44.895
	CRR073309	Second white 1	166.245
	CRR073310	Second white 2	108.942
	CRR073311	Second white 3	106.700
	CRR073312	Silver flowering 1	127.954
	CRR073313	Silver flowering 2	132.017
	CRR073314	Silver flowering 3	129.012
	CRR073315	Gold flowering 1	12.721
	CRR073316	Gold flowering 2	9.700
	CRR073317	Gold flowering 3	9.575
	CRR073318	Tawny withering 1	20.913
	CRR073319	Tawny withering 2	30.060
	CRR073320	Tawny withering 3	15.078