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Detail information of GWHGAAZE002094
Functional Annotation
Database
Orthologs
E value
Annotation
Nr
XP_008229059.1
1.65861E-70
PREDICTED: 26S proteasome non-ATPase regulatory subunit 2 homolog A-like [Prunus mume]
Swissprot
tr|Q9SIV2|PSD2A_ARATH
7E-63
26S proteasome non-ATPase regulatory subunit 2 homolog A
trEMBL
tr|A0A067E2Y6|A0A067E2Y6_CITSI
6E-69
Uncharacterized protein {ECO:0000313|EMBL:KDO49594.1} (Fragment)
TAIR10
AT2G20580.1
8E-47
26S proteasome regulatory subunit S2 1A
Location And Transcript Sequence
(JBrowse)
Scaffold
Type
Start
End
Strand
GWHAAZE00000001
gene
69141494
69146655
-
GWHAAZE00000001
mRNA
69141494
69146655
-
GWHAAZE00000001
exon
69141494
69141626
-
GWHAAZE00000001
exon
69143107
69143189
-
GWHAAZE00000001
exon
69143280
69143318
-
GWHAAZE00000001
exon
69143448
69143516
-
GWHAAZE00000001
exon
69145243
69145302
-
GWHAAZE00000001
exon
69145386
69145506
-
GWHAAZE00000001
exon
69146370
69146473
-
GWHAAZE00000001
exon
69146566
69146655
-
GWHAAZE00000001
CDS
69146566
69146655
-
GWHAAZE00000001
CDS
69146370
69146473
-
GWHAAZE00000001
CDS
69145386
69145506
-
GWHAAZE00000001
CDS
69145243
69145302
-
GWHAAZE00000001
CDS
69143448
69143516
-
GWHAAZE00000001
CDS
69143280
69143318
-
GWHAAZE00000001
CDS
69143107
69143189
-
GWHAAZE00000001
CDS
69141494
69141626
-
Transcript Sequence
>GWHTAAZE002098 ATGGCTTCGGATCCGAACAATGCCGATGGCACCTATAGAAAGTACGAACAGAAGAAGGACGAAGAAGAAGATTTAATCCAATACGCTAAATCTGAGGAGGACACGGAATTGAAGCATCAATTGGAGTTGTACGTTCATATAATTCTTCAAGATTCTGAAACAGGATTAAAGATAAATGCTCTCGAGAGTCTGAGGCATGAAATTCGGATTTCAACAAGCTCTATGACTGCAGTTCCAAAGCCATTAAAGTTCTTGTATCTACATTATGCAACTCTAAAGGCATTCTATGAAGCAATGGCAGATCCGGATTTGAAGAAATTACTAGCAGATATACTTTCAATTTTAGTCTCAACAATGCCTGCAGAAGGAGATCGGAGTGGAGAGGACAATGAAATTGATGATCTAATGGAGCTCGTAGGTCAAATTGTTGTTTTTTTCTTGAAGCACAATGCTGAGCACGAGGCGGTTGATCTTTTGCTTGAGGTTGAAGACCTCAGTACATTAGTGGACCATGTTAACAGTACAACTTATGAAAGGGCATGCCTGTACCTCATCAGCATAGCAAGATTCCTTCCTAAATCAGATGCGTTTACAGCTATGGATGTTGCACATTCGATCTATATGGATTTTCATGAATTTACAAGGGCACTTCAGACTTCACTGTTCCTTGACATCGAGGAGGTTCGCACCAACTCCTGA
Network for GWHGAAZE002094
Network category
Network
Top300 PCC genelist
Coexpression Positive
Network
Top300 PCC genelist
Coexpression Negative
Network
Top300 PCC genelist
Functional Module
Module ID
Function Annotation
Protein Structure
Pfam accession
Pfam name
Alignment start
Alignment end
E-value
PF17781.2
RPN1_RPN2_N
41
125
1.10E-23
PF17781.2
RPN1_RPN2_N
126
226
4.50E-30
PF13419.7
HAD_2
97
192
1.20E-12
Protein Sequence
>GWHPAAZE002096 MASDPNNADGTYRKYEQKKDEEEDLIQYAKSEEDTELKHQLELYVHIILQDSETGLKINALESLRHEIRISTSSMTAVPKPLKFLYLHYATLKAFYEAMADPDLKKLLADILSILVSTMPAEGDRSGEDNEIDDLMELVGQIVVFFLKHNAEHEAVDLLLEVEDLSTLVDHVNSTTYERACLYLISIARFLPKSDAFTAMDVAHSIYMDFHEFTRALQTSLFLDIEEVRTNS
>GWHPAAZE027440 MATKMSSNSTSSTTTTDERKLPILLFDIMDTIVRDPFYHDVPTFFGMSFKELIECKHPTPWIEFEEGLINETELARNFFKDGRPLDLEGLKNCMRRGYSYLEGVEELLHALKQNGYEMHAFTNYPIWYEMIEDKLKLSNYLSWTFCSCINGKRKPDPAFYLEVLKHLNVDPARCIFVDDRMRNVEAAIDAGIVGLQFKNADLLRHDLCLLGIDISSNQDNKNKDPEEEQ
Gene family
Gene family
subfamily
--
--
KEGG pathway
KO
Enzyme
pathway
mapID
K20860
FHY1
Metabolic pathways
map01100
Biosynthesis of secondary metabolites
map01110
Riboflavin metabolism
map00740
Proteasome
map03050
Gene Ontology
GO term
Ontology
Name
GO:0016787
molecular_function
hydrolase activity
Expression pattern
Expression pattern detail
SRP
Sample
Description
TPM
SRP075780
SRR3591705
youngest leaf
0.117
SRR3591706
second leaf
0.079
SRR3591707
mature leaf
0.000
SRR3591708
Shoot apex
0.327
SRR3591709
Stem
0.000
SRR3591710
White floral bud
0.032
SRR3591711
White flower
0.117
SRR3591712
Green floral bud
0.017
SRR3591713
Yellow flower
0.165
SRP173429
SRR8316895
Juvenile bud stage
0.094
SRR8316896
Juvenile bud stage
0.092
SRR8316897
Juvenile bud stage
0.183
SRR8316894
Third green stage
0.114
SRR8316900
Third green stage
0.000
SRR8316901
Third green stage
0.021
SRR8316898
Complete white stage
0.027
SRR8316899
Complete white stage
0.000
SRR8316903
Complete white stage
0.043
SRR8316902
Silver flowering stage
0.105
SRR8316904
Silver flowering stage
0.000
SRR8316905
Silver flowering stage
0.000
SRR8316906
Gold flowering stage
0.035
SRR8316907
Gold flowering stage
0.000
SRR8316908
Gold flowering stage
0.017
SRP132670
SRR6706286
Control
0.000
SRR6706287
Light intensity 50%
0.035
SRR6706288
Light intensity 20%
0.025
CNP0000432
CNS0095592
Slightly white alabastrum(diploid) 1
0.000
CNS0095593
Slightly white alabastrum(diploid) 2
0.000
CNS0095594
Slightly white alabastrum(diploid) 3
0.000
CNS0095595
Whole white alabastrum(diploid) 2
0.117
CNS0095596
Whole white alabastrum(diploid) 3
0.000
CNS0095597
Whole white alabastrum(diploid) 4
0.000
CNS0095598
Silvery flower (diploied) 1
0.327
CNS0095599
Silvery flower (diploied) 2
0.000
CNS0095600
Silvery flower (diploied) 3
0.099
CNS0095601
Golden flower (diploid) 1
0.000
CNS0095602
Golden flower (diploid) 2
0.000
CNS0095603
Golden flower (diploid) 3
0.044
CNS0095604
Slightly white alabastrum(tetraploid) 1
0.059
CNS0095605
Slightly white alabastrum(tetraploid) 2
0.236
CNS0095606
Slightly white alabastrum(tetraploid) 3
0.152
CNS0095607
Whole white alabastrum(tetraploid) 1
0.000
CNS0095608
Whole white alabastrum(tetraploid) 2
0.049
CNS0095609
Whole white alabastrum(tetraploid) 3
0.000
CNS0095610
Silvery flower (tetraploid) 1
0.000
CNS0095611
Silvery flower (tetraploid) 2
0.000
CNS0095612
Silvery flower (tetraploid) 3
0.044
CNS0095613
Golden flower (tetraploid) 1
0.236
CNS0095614
Golden flower (tetraploid) 2
0.381
CNS0095615
Golden flower (tetraploid) 3
0.000
CRA001975
CRR073297
Stem 1
0.000
CRR073298
Stem 2
0.094
CRR073299
Stem 3
0.000
CRR073300
Leaf 1
0.063
CRR073301
Leaf 2
0.089
CRR073302
Leaf 3
0.000
CRR073303
Juvenile bud 1
0.000
CRR073304
Juvenile bud 2
0.000
CRR073305
Juvenile bud 3
0.000
CRR073306
Third green 1
0.000
CRR073307
Third green 2
0.000
CRR073308
Third green 3
0.000
CRR073309
Second white 1
0.000
CRR073310
Second white 2
0.000
CRR073311
Second white 3
0.210
CRR073312
Silver flowering 1
0.000
CRR073313
Silver flowering 2
0.000
CRR073314
Silver flowering 3
0.000
CRR073315
Gold flowering 1
0.000
CRR073316
Gold flowering 2
0.000
CRR073317
Gold flowering 3
0.000
CRR073318
Tawny withering 1
0.030
CRR073319
Tawny withering 2
0.003
CRR073320
Tawny withering 3
0.000