Detail information of GWHGAAZE002095


Functional Annotation

DatabaseOrthologsE valueAnnotation
NrXP_007043687.11.52401E-18Uncharacterized protein TCM_008192 [Theobroma cacao]
Swissprottr|Q01197|E6_GOSHI0.0000001Protein E6
trEMBLtr|A0A061EB41|A0A061EB41_THECC6E-19Uncharacterized protein {ECO:0000313|EMBL:EOX99518.1}
TAIR10AT1G03820.10.002Without detailed annotation

Location And Transcript Sequence (JBrowse)

ScaffoldTypeStartEndStrand
GWHAAZE00000001gene6914924369149788-
GWHAAZE00000001mRNA6914924369149788-
GWHAAZE00000001exon6914924369149788-
GWHAAZE00000001CDS6914924369149788-
Transcript Sequence

Network for GWHGAAZE002095

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist


Functional Module

Module IDFunction Annotation


Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
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Protein Sequence

Gene family

Gene familysubfamily
Ubiquitin FamilyRING
Ubiquitin FamilyU-box

KEGG pathway

KO Enzyme pathway mapID
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Gene Ontology

GO term OntologyName

Expression pattern


Expression pattern detail

SRPSampleDescriptionTPM
SRP075780SRR3591705youngest leaf49.906
SRR3591706second leaf120.149
SRR3591707mature leaf23.394
SRR3591708Shoot apex60.417
SRR3591709Stem48.970
SRR3591710White floral bud3.078
SRR3591711White flower7.345
SRR3591712Green floral bud23.375
SRR3591713Yellow flower1.381
SRP173429 SRR8316895Juvenile bud stage 23.132
SRR8316896Juvenile bud stage 23.386
SRR8316897Juvenile bud stage 6.455
SRR8316894Third green stage 15.546
SRR8316900Third green stage 17.601
SRR8316901Third green stage 18.369
SRR8316898Complete white stage 0.297
SRR8316899Complete white stage 11.041
SRR8316903Complete white stage 2.996
SRR8316902Silver flowering stage1.147
SRR8316904Silver flowering stage1.155
SRR8316905Silver flowering stage0.693
SRR8316906Gold flowering stage 2.892
SRR8316907Gold flowering stage 1.839
SRR8316908Gold flowering stage 5.706
SRP132670SRR6706286Control9.388
SRR6706287Light intensity 50%9.425
SRR6706288Light intensity 20%7.781
CNP0000432CNS0095592Slightly white alabastrum(diploid) 120.535
CNS0095593Slightly white alabastrum(diploid) 218.375
CNS0095594Slightly white alabastrum(diploid) 313.698
CNS0095595Whole white alabastrum(diploid) 25.149
CNS0095596Whole white alabastrum(diploid) 32.284
CNS0095597Whole white alabastrum(diploid) 46.523
CNS0095598Silvery flower (diploied) 112.376
CNS0095599Silvery flower (diploied) 26.824
CNS0095600Silvery flower (diploied) 33.727
CNS0095601Golden flower (diploid) 113.986
CNS0095602Golden flower (diploid) 25.070
CNS0095603Golden flower (diploid) 34.414
CNS0095604Slightly white alabastrum(tetraploid) 128.652
CNS0095605Slightly white alabastrum(tetraploid) 220.172
CNS0095606Slightly white alabastrum(tetraploid) 355.951
CNS0095607Whole white alabastrum(tetraploid) 17.993
CNS0095608Whole white alabastrum(tetraploid) 21.600
CNS0095609Whole white alabastrum(tetraploid) 36.947
CNS0095610Silvery flower (tetraploid) 10.000
CNS0095611Silvery flower (tetraploid) 23.207
CNS0095612Silvery flower (tetraploid) 31.706
CNS0095613Golden flower (tetraploid) 10.517
CNS0095614Golden flower (tetraploid) 21.311
CNS0095615Golden flower (tetraploid) 30.183
CRA001975CRR073297Stem 1116.140
CRR073298Stem 2131.246
CRR073299Stem 3110.754
CRR073300Leaf 148.014
CRR073301Leaf 272.445
CRR073302Leaf 330.318
CRR073303Juvenile bud 113.106
CRR073304Juvenile bud 21.199
CRR073305Juvenile bud 319.075
CRR073306Third green 14.362
CRR073307Third green 20.676
CRR073308Third green 30.928
CRR073309Second white 10.641
CRR073310Second white 20.801
CRR073311Second white 30.332
CRR073312Silver flowering 10.121
CRR073313Silver flowering 20.000
CRR073314Silver flowering 30.146
CRR073315Gold flowering 126.371
CRR073316Gold flowering 234.769
CRR073317Gold flowering 393.094
CRR073318Tawny withering 1476.709
CRR073319Tawny withering 2347.718
CRR073320Tawny withering 3367.941