Gene detail

Detail information of GWHGAAZE002141

Functional Annotation

Database	Orthologs	E value	Annotation
Nr	EYU28950.1	3.78521E-73	hypothetical protein MIMGU_mgv1a021394mg [Erythranthe guttata]
COG	YP_006544372.1	3E-10	hypothetical protein BN140_0733
Swissprot	tr\|Q9SIL7\|FLA6_ARATH	3E-61	Fasciclin-like arabinogalactan protein 6 (Precursor)
trEMBL	tr\|A0A022QR56\|A0A022QR56_ERYGU	1E-73	Uncharacterized protein {ECO:0000313\|EMBL:EYU28950.1}
TAIR10	AT5G44130.1	8E-50	FASCICLIN-like arabinogalactan protein 13 precursor

Location And Transcript Sequence (JBrowse)

Scaffold	Type	Start	End	Strand
GWHAAZE00000001	gene	70956254	70957195	+
GWHAAZE00000001	mRNA	70956254	70957195	+
GWHAAZE00000001	exon	70956254	70957195	+
GWHAAZE00000001	CDS	70956254	70957195	+

Transcript Sequence
>GWHTAAZE002145 ATGGCTTCTTCCACGCCACTCTCCCTCCTCCTCCTAACCCTAACCCTAACCCACATTCAAGCCCAAACCCCCTCCCCTTCCGGTCCGATCAACATCACCACCATCCTCGAAAAAGGCAGCAAATACACCACCTTCATACGCTTGACAACCGAGACCCAAGTCGCCAACCAGATCAATAACCAAGTTAACACCACCACCGAGGGCATGACCGTCTTCGCGCCCACTGACAGCGCCTTCGCTAACCTCCCCGCTGGTACCCTAAACACGCTCACCGACAACCAACGCGTGCAACTCGTCCTCTATCACGTGCTCCCTAAGTCCTACTCACCACAATCACTTCTGACCGTTAGTAATCCGGTCCGTACTCAGGCCACCGGCCGGAATGGGCAAGTGTTCGGGTTAAACTTCACCGGGAACGGGAACCAGGTCAACGTGTCTACCGGAATTGTGGAGACTTTTGTTAACAATGCTTTGAGGCCGAATTTTCCTTTGGTTGTTTATCAATTGAATAAGGTTTTGTTGCCCGTGGAGTACTTTTATCAGACCAAGGCTCCGGTGGCCGCCCCTCCAACAGTCAATGGGACCGTCACCTCTAGCAGGTCGAACCGCACGAGTACTGCCATCCCTCCGGCAGTTAACGGCACTGTCACCCCTAGCGGGTCGAACCGCACGAGAGCTGCCACCCCTCCTGCAGTTAATGGGACCGTCACCCCTAGCGGGTTGAACGGCACAATACCTGCCACGCCTCCGGCAGTCAGTGAGGCTGTCGTCACGTCTAACGGGTCAAACGGCACGATACCTGCAACTCCTCCAGCAGTTAATGTGACCGTCGTCACCTCTAGTGGGTCGAACGGCACGAGAGCGATCCAGGACAGCGGGTCCGTTCGGACAAGTGTTGGGTTTGGATTTGTTGGGTTGTTTTGCATGGGATTATTGCGGTGA

Network for GWHGAAZE002141

Network category	Network	Top300 PCC genelist
Coexpression Positive	Network	Top300 PCC genelist
Coexpression Negative	Network	Top300 PCC genelist

Functional Module

Module ID	Function Annotation

Protein Structure

Pfam accession	Pfam name	Alignment start	Alignment end	E-value
PF02469.23	Fasciclin	41	175	9.70E-19
PF03081.16	Exo70	188	548	2.10E-74

Protein Sequence

Gene family

Gene family	subfamily
--	--

KEGG pathway

KO	Enzyme	pathway	mapID
K07195	EXOC7, EXO70	Insulin signaling pathway	map04910

Gene Ontology

GO term	Ontology	Name
GO:0006887	biological_process	exocytosis
GO:0000145	cellular_component	exocyst

Expression pattern

Expression pattern detail

SRP	Sample	Description	TPM
SRP075780	SRR3591705	youngest leaf	0.000
	SRR3591706	second leaf	0.000
	SRR3591707	mature leaf	0.000
	SRR3591708	Shoot apex	0.000
	SRR3591709	Stem	0.228
	SRR3591710	White floral bud	0.224
	SRR3591711	White flower	0.000
	SRR3591712	Green floral bud	0.416
	SRR3591713	Yellow flower	0.000
SRP173429	SRR8316895	Juvenile bud stage	0.000
	SRR8316896	Juvenile bud stage	0.035
	SRR8316897	Juvenile bud stage	0.217
	SRR8316894	Third green stage	0.000
	SRR8316900	Third green stage	0.143
	SRR8316901	Third green stage	0.037
	SRR8316898	Complete white stage	0.000
	SRR8316899	Complete white stage	0.188
	SRR8316903	Complete white stage	0.158
	SRR8316902	Silver flowering stage	0.062
	SRR8316904	Silver flowering stage	0.111
	SRR8316905	Silver flowering stage	0.000
	SRR8316906	Gold flowering stage	0.000
	SRR8316907	Gold flowering stage	0.000
	SRR8316908	Gold flowering stage	0.000
SRP132670	SRR6706286	Control	0.136
	SRR6706287	Light intensity 50%	0.102
	SRR6706288	Light intensity 20%	0.230
CNP0000432	CNS0095592	Slightly white alabastrum(diploid) 1	0.000
	CNS0095593	Slightly white alabastrum(diploid) 2	0.578
	CNS0095594	Slightly white alabastrum(diploid) 3	0.340
	CNS0095595	Whole white alabastrum(diploid) 2	0.317
	CNS0095596	Whole white alabastrum(diploid) 3	0.298
	CNS0095597	Whole white alabastrum(diploid) 4	0.015
	CNS0095598	Silvery flower (diploied) 1	0.000
	CNS0095599	Silvery flower (diploied) 2	0.000
	CNS0095600	Silvery flower (diploied) 3	0.087
	CNS0095601	Golden flower (diploid) 1	0.000
	CNS0095602	Golden flower (diploid) 2	0.000
	CNS0095603	Golden flower (diploid) 3	0.000
	CNS0095604	Slightly white alabastrum(tetraploid) 1	0.169
	CNS0095605	Slightly white alabastrum(tetraploid) 2	0.475
	CNS0095606	Slightly white alabastrum(tetraploid) 3	0.324
	CNS0095607	Whole white alabastrum(tetraploid) 1	0.304
	CNS0095608	Whole white alabastrum(tetraploid) 2	0.506
	CNS0095609	Whole white alabastrum(tetraploid) 3	0.927
	CNS0095610	Silvery flower (tetraploid) 1	0.058
	CNS0095611	Silvery flower (tetraploid) 2	0.039
	CNS0095612	Silvery flower (tetraploid) 3	0.000
	CNS0095613	Golden flower (tetraploid) 1	0.000
	CNS0095614	Golden flower (tetraploid) 2	0.000
	CNS0095615	Golden flower (tetraploid) 3	0.000
CRA001975	CRR073297	Stem 1	0.057
	CRR073298	Stem 2	0.123
	CRR073299	Stem 3	0.000
	CRR073300	Leaf 1	0.206
	CRR073301	Leaf 2	0.161
	CRR073302	Leaf 3	0.000
	CRR073303	Juvenile bud 1	1.377
	CRR073304	Juvenile bud 2	0.295
	CRR073305	Juvenile bud 3	0.644
	CRR073306	Third green 1	0.526
	CRR073307	Third green 2	0.289
	CRR073308	Third green 3	0.680
	CRR073309	Second white 1	0.000
	CRR073310	Second white 2	0.000
	CRR073311	Second white 3	0.000
	CRR073312	Silver flowering 1	0.000
	CRR073313	Silver flowering 2	0.000
	CRR073314	Silver flowering 3	0.000
	CRR073315	Gold flowering 1	0.000
	CRR073316	Gold flowering 2	0.020
	CRR073317	Gold flowering 3	0.000
	CRR073318	Tawny withering 1	0.000
	CRR073319	Tawny withering 2	0.000
	CRR073320	Tawny withering 3	0.008