Gene detail

Detail information of GWHGAAZE002150

Functional Annotation

Database	Orthologs	E value	Annotation
Nr	EYU42144.1	0	hypothetical protein MIMGU_mgv1a006516mg [Erythranthe guttata]
COG	YP_001995577.1	3E-49	class I and II aminotransferase
Swissprot	tr\|Q9FN30\|TAT2_ARATH	1E-170	Probable aminotransferase TAT2
trEMBL	tr\|A0A022RQ04\|A0A022RQ04_ERYGU	0	Uncharacterized protein {ECO:0000313\|EMBL:EYU42144.1}
TAIR10	AT5G53970.1	2E-137	Tyrosine transaminase family protein

Location And Transcript Sequence (JBrowse)

Scaffold	Type	Start	End	Strand
GWHAAZE00000001	gene	71205051	71210850	+
GWHAAZE00000001	mRNA	71205051	71210850	+
GWHAAZE00000001	exon	71205051	71205310	+
GWHAAZE00000001	exon	71207214	71207553	+
GWHAAZE00000001	exon	71208250	71208564	+
GWHAAZE00000001	exon	71208781	71208840	+
GWHAAZE00000001	exon	71209689	71209844	+
GWHAAZE00000001	exon	71210409	71210502	+
GWHAAZE00000001	exon	71210738	71210850	+
GWHAAZE00000001	CDS	71205051	71205310	+
GWHAAZE00000001	CDS	71207214	71207553	+
GWHAAZE00000001	CDS	71208250	71208564	+
GWHAAZE00000001	CDS	71208781	71208840	+
GWHAAZE00000001	CDS	71209689	71209844	+
GWHAAZE00000001	CDS	71210409	71210502	+
GWHAAZE00000001	CDS	71210738	71210850	+

Transcript Sequence
>GWHTAAZE002154 ATGGAGAATGGGTCAAAAAAATTGGTTTTAGAGGAGAAAAAAGAAGAAGAATCACTCACAGTGAGAGATGTTTTGGGGAAATTAATGGAAAATATCAATGAAGGGGAAAAGAGGGCAACAATTCCTCTGGGTCATGGAGATCCCTCTGTATTCCCCTGTTTTCAAACCACTCCCATTGCTCAAGATGCTATTGTTAATGCCCTTCAATCTTCTCAATTTAACTGTTATGCCCCTGCTGCTGGCATTCTTCCTGCTAGAAGGTCTGTGGCTGATTATCTCTCTAAAGATCTTCCCTATAAATTATCAGCAGACGATGTTTTTCTCACAGTTGGCGCCAATCATGCAATCGAAGTGATGATAACAGTTCTTGCTCGACCTGGTGCCAACATATTGTTCCCTAGGCCAGGGTATCCATTATATGAAGCTAGAGCTAAATTTAGCAATCTTGAGGTCCGCCATTTTGATCTTCTCCCAGAAAAAGACTGGGAGGTTGATCTTGATGGCGTAGAGGCATTAGCGGATGATAAAACTGTTGCTATAGTTGTAATTAACCCTGGTAACCCTTGCGGAAATGTTTTGACACATGAACATTTGCAAAAGGTTGCAGATACAGCAAGAAAGCTTGGGATTATTGTGATTGCAGATGAAGTTTACAACCATCTATGTTTTGGAAGTAAACCATTTGTGCCCATAGGAGTGTTTGGATCAATTGCACCTGTTCTTACAATCGGCACCATTTCAAAGAGATGGATCGTTCCCGGTTGGCGACTTGGTTGGATAGCATTAACTGATCGCACTGGCATCCTTCACAAATCTGGGGTCTCTCTCTCTCTCTCTCTCTCTCTCCACATTTTCTTGCATACACTCCATTATATACCTTGTTATTTATTCCCTCGTGTAGAAAAGAGATGGCAAATTGTTGATTCAATTAAGAGCTATCTCAACATCACTGCAGATCCTGCAACTTTCATTCAGGGTGCAGTTCCAGAAATCCTCGAGAAAACAACCTCGTGTTTCTTTTCGAAGATTATTAATACACTGAGAGAAGATGCAGATATTTTTTATGATAGAGTGAAGGAGATTCCATGCATTACTTGCCCACACAAACCCGAAGGAGCCATGTCCGCAATGGTGAAGCTAAACCTATCAGTATTAGGAGGCATAAACAACGACATGGAATTTTGTATCAAGTTGGCCAAAGAGGAATCCGTGATCGTATTGCCCGGGGTTGCAGTGGGATTAAAGAATTGGGTGAGAATAACGTTTGCAGTCGAACCAGCATTTCTTGAAGATGGACTTGGGAGGATCAAATCCTTTTGCTTGAGGCATTCCAAATAA

Network for GWHGAAZE002150

Network category	Network	Top300 PCC genelist
Coexpression Positive	Network	Top300 PCC genelist
Coexpression Negative	Network	Top300 PCC genelist

Functional Module

Module ID	Function Annotation

Protein Structure

Pfam accession	Pfam name	Alignment start	Alignment end	E-value
PF00155.22	Aminotran_1_2	41	434	2.30E-53
PF00044.25	Gp_dh_N	7	52	5.30E-09
PF02800.21	Gp_dh_C	104	261	2.60E-71

Protein Sequence

Gene family

Gene family	subfamily
--	--

KEGG pathway

KO	Enzyme	pathway	mapID
K00134	GAPDH, gapA	Metabolic pathways	map01100
		Metabolic pathways	map01100
		Biosynthesis of secondary metabolites	map01110
		Biosynthesis of secondary metabolites	map01110
		Microbial metabolism in diverse environments	map01120
		Carbon metabolism	map01200
		Biosynthesis of amino acids	map01230
		Biosynthesis of amino acids	map01230
		Glycolysis / Gluconeogenesis	map00010
		Carbon fixation in photosynthetic organisms	map00710
		Cysteine and methionine metabolism	map00270
		Tyrosine metabolism	map00350
		Phenylalanine metabolism	map00360
		Phenylalanine, tyrosine and tryptophan biosynthesis	map00400
		Ubiquinone and other terpenoid-quinone biosynthesis	map00130
		Isoquinoline alkaloid biosynthesis	map00950
		Tropane, piperidine and pyridine alkaloid biosynthesis	map00960
		Novobiocin biosynthesis	map00401
		HIF-1 signaling pathway	map04066

Gene Ontology

GO term	Ontology	Name
GO:0006520	biological_process	cellular amino acid metabolic process
GO:0009058	biological_process	biosynthetic process
GO:0055114	biological_process	oxidation-reduction process
GO:0006006	biological_process	glucose metabolic process
GO:0008483	molecular_function	transaminase activity
GO:0030170	molecular_function	pyridoxal phosphate binding
GO:0003824	molecular_function	catalytic activity
GO:0016620	molecular_function	oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor
GO:0050661	molecular_function	NADP binding
GO:0051287	molecular_function	NAD binding

Expression pattern

Expression pattern detail

SRP	Sample	Description	TPM
SRP075780	SRR3591705	youngest leaf	4.928
	SRR3591706	second leaf	6.719
	SRR3591707	mature leaf	0.514
	SRR3591708	Shoot apex	24.212
	SRR3591709	Stem	1.135
	SRR3591710	White floral bud	11.962
	SRR3591711	White flower	2.568
	SRR3591712	Green floral bud	30.180
	SRR3591713	Yellow flower	0.461
SRP173429	SRR8316895	Juvenile bud stage	10.914
	SRR8316896	Juvenile bud stage	17.012
	SRR8316897	Juvenile bud stage	9.796
	SRR8316894	Third green stage	7.335
	SRR8316900	Third green stage	24.245
	SRR8316901	Third green stage	22.547
	SRR8316898	Complete white stage	9.504
	SRR8316899	Complete white stage	22.156
	SRR8316903	Complete white stage	9.676
	SRR8316902	Silver flowering stage	2.715
	SRR8316904	Silver flowering stage	2.453
	SRR8316905	Silver flowering stage	0.547
	SRR8316906	Gold flowering stage	0.875
	SRR8316907	Gold flowering stage	0.868
	SRR8316908	Gold flowering stage	1.618
SRP132670	SRR6706286	Control	16.087
	SRR6706287	Light intensity 50%	18.025
	SRR6706288	Light intensity 20%	17.975
CNP0000432	CNS0095592	Slightly white alabastrum(diploid) 1	22.625
	CNS0095593	Slightly white alabastrum(diploid) 2	19.950
	CNS0095594	Slightly white alabastrum(diploid) 3	28.875
	CNS0095595	Whole white alabastrum(diploid) 2	30.823
	CNS0095596	Whole white alabastrum(diploid) 3	34.370
	CNS0095597	Whole white alabastrum(diploid) 4	34.223
	CNS0095598	Silvery flower (diploied) 1	5.524
	CNS0095599	Silvery flower (diploied) 2	6.821
	CNS0095600	Silvery flower (diploied) 3	3.027
	CNS0095601	Golden flower (diploid) 1	5.336
	CNS0095602	Golden flower (diploid) 2	3.708
	CNS0095603	Golden flower (diploid) 3	2.308
	CNS0095604	Slightly white alabastrum(tetraploid) 1	30.176
	CNS0095605	Slightly white alabastrum(tetraploid) 2	31.077
	CNS0095606	Slightly white alabastrum(tetraploid) 3	15.539
	CNS0095607	Whole white alabastrum(tetraploid) 1	36.330
	CNS0095608	Whole white alabastrum(tetraploid) 2	39.213
	CNS0095609	Whole white alabastrum(tetraploid) 3	31.362
	CNS0095610	Silvery flower (tetraploid) 1	0.812
	CNS0095611	Silvery flower (tetraploid) 2	2.082
	CNS0095612	Silvery flower (tetraploid) 3	2.651
	CNS0095613	Golden flower (tetraploid) 1	0.314
	CNS0095614	Golden flower (tetraploid) 2	0.608
	CNS0095615	Golden flower (tetraploid) 3	1.391
CRA001975	CRR073297	Stem 1	17.674
	CRR073298	Stem 2	15.245
	CRR073299	Stem 3	12.218
	CRR073300	Leaf 1	20.197
	CRR073301	Leaf 2	16.707
	CRR073302	Leaf 3	19.946
	CRR073303	Juvenile bud 1	18.605
	CRR073304	Juvenile bud 2	20.053
	CRR073305	Juvenile bud 3	16.564
	CRR073306	Third green 1	4.791
	CRR073307	Third green 2	3.489
	CRR073308	Third green 3	5.626
	CRR073309	Second white 1	1.067
	CRR073310	Second white 2	0.492
	CRR073311	Second white 3	0.698
	CRR073312	Silver flowering 1	1.862
	CRR073313	Silver flowering 2	1.861
	CRR073314	Silver flowering 3	0.366
	CRR073315	Gold flowering 1	2.055
	CRR073316	Gold flowering 2	1.621
	CRR073317	Gold flowering 3	1.264
	CRR073318	Tawny withering 1	2.751
	CRR073319	Tawny withering 2	3.573
	CRR073320	Tawny withering 3	4.524