Detail information of GWHGAAZE002181


Functional Annotation

DatabaseOrthologsE valueAnnotation
NrXP_011098021.11.4824E-155PREDICTED: extensin [Sesamum indicum]
trEMBLtr|K4CFU4|K4CFU4_SOLLC9E-158Uncharacterized protein {ECO:0000313|EnsemblPlants:Solyc07g053990.2.1}
TAIR10AT4G28300.11E-89Protein of unknown function (DUF1421)

Location And Transcript Sequence (JBrowse)

ScaffoldTypeStartEndStrand
GWHAAZE00000001gene7223756572243569-
GWHAAZE00000001mRNA7223756572243569-
GWHAAZE00000001exon7223756572238164-
GWHAAZE00000001exon7223833272238679-
GWHAAZE00000001exon7224096972241181-
GWHAAZE00000001exon7224343272243569-
GWHAAZE00000001CDS7224343272243569-
GWHAAZE00000001CDS7224096972241181-
GWHAAZE00000001CDS7223833272238679-
GWHAAZE00000001CDS7223756572238164-
Transcript Sequence

Network for GWHGAAZE002181

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist


Functional Module

Module IDFunction Annotation
CFinderModule0182


Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF07223.12DUF14213784225.70E-23
Protein Sequence

Gene family

Gene familysubfamily
----

KEGG pathway

KO Enzyme pathway mapID
--------

Gene Ontology

GO term OntologyName

Expression pattern


Expression pattern detail

SRPSampleDescriptionTPM
SRP075780SRR3591705youngest leaf43.481
SRR3591706second leaf19.996
SRR3591707mature leaf12.624
SRR3591708Shoot apex27.229
SRR3591709Stem75.584
SRR3591710White floral bud37.372
SRR3591711White flower55.204
SRR3591712Green floral bud31.822
SRR3591713Yellow flower39.055
SRP173429 SRR8316895Juvenile bud stage 25.404
SRR8316896Juvenile bud stage 36.741
SRR8316897Juvenile bud stage 19.988
SRR8316894Third green stage 11.311
SRR8316900Third green stage 28.813
SRR8316901Third green stage 32.055
SRR8316898Complete white stage 10.394
SRR8316899Complete white stage 29.336
SRR8316903Complete white stage 22.986
SRR8316902Silver flowering stage19.952
SRR8316904Silver flowering stage20.612
SRR8316905Silver flowering stage9.851
SRR8316906Gold flowering stage 34.424
SRR8316907Gold flowering stage 41.829
SRR8316908Gold flowering stage 40.113
SRP132670SRR6706286Control32.670
SRR6706287Light intensity 50%27.210
SRR6706288Light intensity 20%26.048
CNP0000432CNS0095592Slightly white alabastrum(diploid) 122.075
CNS0095593Slightly white alabastrum(diploid) 226.257
CNS0095594Slightly white alabastrum(diploid) 323.985
CNS0095595Whole white alabastrum(diploid) 218.104
CNS0095596Whole white alabastrum(diploid) 315.791
CNS0095597Whole white alabastrum(diploid) 416.866
CNS0095598Silvery flower (diploied) 127.840
CNS0095599Silvery flower (diploied) 222.165
CNS0095600Silvery flower (diploied) 346.700
CNS0095601Golden flower (diploid) 121.995
CNS0095602Golden flower (diploid) 243.665
CNS0095603Golden flower (diploid) 340.762
CNS0095604Slightly white alabastrum(tetraploid) 124.977
CNS0095605Slightly white alabastrum(tetraploid) 218.078
CNS0095606Slightly white alabastrum(tetraploid) 333.540
CNS0095607Whole white alabastrum(tetraploid) 114.432
CNS0095608Whole white alabastrum(tetraploid) 215.831
CNS0095609Whole white alabastrum(tetraploid) 324.684
CNS0095610Silvery flower (tetraploid) 136.700
CNS0095611Silvery flower (tetraploid) 240.238
CNS0095612Silvery flower (tetraploid) 344.111
CNS0095613Golden flower (tetraploid) 126.931
CNS0095614Golden flower (tetraploid) 230.149
CNS0095615Golden flower (tetraploid) 344.891
CRA001975CRR073297Stem 151.356
CRR073298Stem 242.187
CRR073299Stem 349.521
CRR073300Leaf 137.594
CRR073301Leaf 237.997
CRR073302Leaf 337.365
CRR073303Juvenile bud 134.619
CRR073304Juvenile bud 241.738
CRR073305Juvenile bud 348.684
CRR073306Third green 169.472
CRR073307Third green 256.980
CRR073308Third green 361.433
CRR073309Second white 174.423
CRR073310Second white 256.018
CRR073311Second white 351.060
CRR073312Silver flowering 172.830
CRR073313Silver flowering 278.526
CRR073314Silver flowering 365.773
CRR073315Gold flowering 117.728
CRR073316Gold flowering 225.335
CRR073317Gold flowering 325.473
CRR073318Tawny withering 148.451
CRR073319Tawny withering 244.720
CRR073320Tawny withering 354.464