Detail information of GWHGAAZE002220


Functional Annotation

DatabaseOrthologsE valueAnnotation

Location And Transcript Sequence (JBrowse)

ScaffoldTypeStartEndStrand
GWHAAZE00000001gene7324784073249824+
GWHAAZE00000001mRNA7324784073249824+
GWHAAZE00000001exon7324784073247982+
GWHAAZE00000001exon7324816573248225+
GWHAAZE00000001exon7324935773249824+
GWHAAZE00000001CDS7324784073247982+
GWHAAZE00000001CDS7324816573248225+
GWHAAZE00000001CDS7324935773249824+
Transcript Sequence

Network for GWHGAAZE002220

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist


Functional Module

Module IDFunction Annotation


Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF00856.29SET61382.70E-13
Protein Sequence

Gene family

Gene familysubfamily
Transcription Factors FamilySET

KEGG pathway

KO Enzyme pathway mapID
--------

Gene Ontology

GO term OntologyName
GO:0005515molecular_functionprotein binding

Expression pattern


Expression pattern detail

SRPSampleDescriptionTPM
SRP075780SRR3591705youngest leaf0.110
SRR3591706second leaf0.000
SRR3591707mature leaf0.000
SRR3591708Shoot apex0.000
SRR3591709Stem0.000
SRR3591710White floral bud3.926
SRR3591711White flower0.152
SRR3591712Green floral bud9.451
SRR3591713Yellow flower0.000
SRP173429 SRR8316895Juvenile bud stage 7.419
SRR8316896Juvenile bud stage 12.201
SRR8316897Juvenile bud stage 3.417
SRR8316894Third green stage 4.976
SRR8316900Third green stage 12.442
SRR8316901Third green stage 15.117
SRR8316898Complete white stage 0.128
SRR8316899Complete white stage 0.050
SRR8316903Complete white stage 0.000
SRR8316902Silver flowering stage0.039
SRR8316904Silver flowering stage0.325
SRR8316905Silver flowering stage0.056
SRR8316906Gold flowering stage 0.000
SRR8316907Gold flowering stage 0.000
SRR8316908Gold flowering stage 0.000
SRP132670SRR6706286Control6.092
SRR6706287Light intensity 50%5.428
SRR6706288Light intensity 20%4.572
CNP0000432CNS0095592Slightly white alabastrum(diploid) 113.629
CNS0095593Slightly white alabastrum(diploid) 29.513
CNS0095594Slightly white alabastrum(diploid) 317.615
CNS0095595Whole white alabastrum(diploid) 217.839
CNS0095596Whole white alabastrum(diploid) 320.880
CNS0095597Whole white alabastrum(diploid) 419.001
CNS0095598Silvery flower (diploied) 10.139
CNS0095599Silvery flower (diploied) 21.228
CNS0095600Silvery flower (diploied) 30.078
CNS0095601Golden flower (diploid) 10.250
CNS0095602Golden flower (diploid) 20.000
CNS0095603Golden flower (diploid) 30.357
CNS0095604Slightly white alabastrum(tetraploid) 18.431
CNS0095605Slightly white alabastrum(tetraploid) 210.700
CNS0095606Slightly white alabastrum(tetraploid) 30.000
CNS0095607Whole white alabastrum(tetraploid) 111.604
CNS0095608Whole white alabastrum(tetraploid) 212.609
CNS0095609Whole white alabastrum(tetraploid) 35.705
CNS0095610Silvery flower (tetraploid) 10.074
CNS0095611Silvery flower (tetraploid) 20.410
CNS0095612Silvery flower (tetraploid) 30.475
CNS0095613Golden flower (tetraploid) 10.237
CNS0095614Golden flower (tetraploid) 20.000
CNS0095615Golden flower (tetraploid) 30.305
CRA001975CRR073297Stem 16.388
CRR073298Stem 23.298
CRR073299Stem 35.279
CRR073300Leaf 17.616
CRR073301Leaf 27.216
CRR073302Leaf 34.013
CRR073303Juvenile bud 13.568
CRR073304Juvenile bud 22.000
CRR073305Juvenile bud 30.018
CRR073306Third green 10.210
CRR073307Third green 22.098
CRR073308Third green 30.817
CRR073309Second white 10.000
CRR073310Second white 20.664
CRR073311Second white 30.358
CRR073312Silver flowering 10.026
CRR073313Silver flowering 20.080
CRR073314Silver flowering 30.290
CRR073315Gold flowering 10.000
CRR073316Gold flowering 20.043
CRR073317Gold flowering 30.059
CRR073318Tawny withering 10.496
CRR073319Tawny withering 21.198
CRR073320Tawny withering 31.039