Detail information of GWHGAAZE002387


Functional Annotation

DatabaseOrthologsE valueAnnotation

Location And Transcript Sequence (JBrowse)

ScaffoldTypeStartEndStrand
GWHAAZE00000001gene7762169177622218-
GWHAAZE00000001mRNA7762169177622218-
GWHAAZE00000001exon7762198577622218-
GWHAAZE00000001exon7762169177621954-
GWHAAZE00000001CDS7762198577622218-
GWHAAZE00000001CDS7762169177621954-
Transcript Sequence

Network for GWHGAAZE002387

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist


Functional Module

Module IDFunction Annotation
CFinderModule0030


Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
----------
Protein Sequence

Gene family

Gene familysubfamily
----

KEGG pathway

KO Enzyme pathway mapID
--------

Gene Ontology

GO term OntologyName

Expression pattern


Expression pattern detail

SRPSampleDescriptionTPM
SRP075780SRR3591705youngest leaf0.063
SRR3591706second leaf0.000
SRR3591707mature leaf0.145
SRR3591708Shoot apex0.000
SRR3591709Stem0.196
SRR3591710White floral bud0.128
SRR3591711White flower0.000
SRR3591712Green floral bud0.484
SRR3591713Yellow flower0.140
SRP173429 SRR8316895Juvenile bud stage 19.334
SRR8316896Juvenile bud stage 24.070
SRR8316897Juvenile bud stage 0.233
SRR8316894Third green stage 11.169
SRR8316900Third green stage 25.668
SRR8316901Third green stage 25.325
SRR8316898Complete white stage 7.996
SRR8316899Complete white stage 26.884
SRR8316903Complete white stage 24.878
SRR8316902Silver flowering stage10.526
SRR8316904Silver flowering stage22.355
SRR8316905Silver flowering stage13.237
SRR8316906Gold flowering stage 30.183
SRR8316907Gold flowering stage 27.081
SRR8316908Gold flowering stage 9.640
SRP132670SRR6706286Control53.524
SRR6706287Light intensity 50%48.099
SRR6706288Light intensity 20%49.474
CNP0000432CNS0095592Slightly white alabastrum(diploid) 127.689
CNS0095593Slightly white alabastrum(diploid) 222.982
CNS0095594Slightly white alabastrum(diploid) 326.010
CNS0095595Whole white alabastrum(diploid) 222.475
CNS0095596Whole white alabastrum(diploid) 318.118
CNS0095597Whole white alabastrum(diploid) 420.342
CNS0095598Silvery flower (diploied) 131.906
CNS0095599Silvery flower (diploied) 222.465
CNS0095600Silvery flower (diploied) 328.544
CNS0095601Golden flower (diploid) 120.131
CNS0095602Golden flower (diploid) 221.867
CNS0095603Golden flower (diploid) 327.617
CNS0095604Slightly white alabastrum(tetraploid) 10.266
CNS0095605Slightly white alabastrum(tetraploid) 20.939
CNS0095606Slightly white alabastrum(tetraploid) 30.036
CNS0095607Whole white alabastrum(tetraploid) 10.929
CNS0095608Whole white alabastrum(tetraploid) 21.155
CNS0095609Whole white alabastrum(tetraploid) 30.464
CNS0095610Silvery flower (tetraploid) 10.180
CNS0095611Silvery flower (tetraploid) 20.348
CNS0095612Silvery flower (tetraploid) 30.306
CNS0095613Golden flower (tetraploid) 10.000
CNS0095614Golden flower (tetraploid) 20.060
CNS0095615Golden flower (tetraploid) 30.000
CRA001975CRR073297Stem 136.019
CRR073298Stem 238.790
CRR073299Stem 328.169
CRR073300Leaf 143.036
CRR073301Leaf 237.546
CRR073302Leaf 323.393
CRR073303Juvenile bud 125.651
CRR073304Juvenile bud 221.029
CRR073305Juvenile bud 320.571
CRR073306Third green 116.185
CRR073307Third green 211.555
CRR073308Third green 316.115
CRR073309Second white 111.021
CRR073310Second white 221.348
CRR073311Second white 316.101
CRR073312Silver flowering 110.472
CRR073313Silver flowering 29.392
CRR073314Silver flowering 312.961
CRR073315Gold flowering 15.812
CRR073316Gold flowering 214.678
CRR073317Gold flowering 34.655
CRR073318Tawny withering 124.215
CRR073319Tawny withering 222.248
CRR073320Tawny withering 322.514