Detail information of GWHGAAZE002396


Functional Annotation

DatabaseOrthologsE valueAnnotation
NrCAC91565.15.27557E-71hydroperoxide lyase [Nicotiana attenuata]
Swissprottr|Q9ZSY9|C74B2_ARATH3E-54Linolenate hydroperoxide lyase, chloroplastic {ECO:0000305|PubMed:9701595} (Precursor)
trEMBLtr|Q93YF8|Q93YF8_NICAT2E-71Hydroperoxide lyase {ECO:0000313|EMBL:CAC91565.1}
TAIR10AT5G42650.18E-31allene oxide synthase

Location And Transcript Sequence (JBrowse)

ScaffoldTypeStartEndStrand
GWHAAZE00000001gene7784870177849141-
GWHAAZE00000001mRNA7784870177849141-
GWHAAZE00000001exon7784870177849141-
GWHAAZE00000001CDS7784870177849141-
Transcript Sequence

Network for GWHGAAZE002396

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist


Functional Module

Module IDFunction Annotation


Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
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Protein Sequence

Gene family

Gene familysubfamily
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KEGG pathway

KO Enzyme pathway mapID
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Gene Ontology

GO term OntologyName
GO:0055114biological_processoxidation-reduction process
GO:0005506molecular_functioniron ion binding
GO:0016705molecular_functionoxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen
GO:0020037molecular_functionheme binding

Expression pattern


Expression pattern detail

SRPSampleDescriptionTPM
SRP075780SRR3591705youngest leaf332.702
SRR3591706second leaf488.271
SRR3591707mature leaf570.331
SRR3591708Shoot apex377.257
SRR3591709Stem104.856
SRR3591710White floral bud269.290
SRR3591711White flower113.637
SRR3591712Green floral bud402.847
SRR3591713Yellow flower42.081
SRP173429 SRR8316895Juvenile bud stage 234.357
SRR8316896Juvenile bud stage 187.295
SRR8316897Juvenile bud stage 131.454
SRR8316894Third green stage 66.213
SRR8316900Third green stage 228.325
SRR8316901Third green stage 205.061
SRR8316898Complete white stage 63.461
SRR8316899Complete white stage 113.176
SRR8316903Complete white stage 93.164
SRR8316902Silver flowering stage35.012
SRR8316904Silver flowering stage47.004
SRR8316905Silver flowering stage29.987
SRR8316906Gold flowering stage 43.995
SRR8316907Gold flowering stage 63.350
SRR8316908Gold flowering stage 47.488
SRP132670SRR6706286Control312.567
SRR6706287Light intensity 50%298.278
SRR6706288Light intensity 20%297.280
CNP0000432CNS0095592Slightly white alabastrum(diploid) 184.703
CNS0095593Slightly white alabastrum(diploid) 269.828
CNS0095594Slightly white alabastrum(diploid) 365.828
CNS0095595Whole white alabastrum(diploid) 285.046
CNS0095596Whole white alabastrum(diploid) 389.978
CNS0095597Whole white alabastrum(diploid) 480.685
CNS0095598Silvery flower (diploied) 1334.406
CNS0095599Silvery flower (diploied) 2300.522
CNS0095600Silvery flower (diploied) 3117.784
CNS0095601Golden flower (diploid) 1182.487
CNS0095602Golden flower (diploid) 2139.497
CNS0095603Golden flower (diploid) 3136.088
CNS0095604Slightly white alabastrum(tetraploid) 1288.970
CNS0095605Slightly white alabastrum(tetraploid) 2225.192
CNS0095606Slightly white alabastrum(tetraploid) 3748.292
CNS0095607Whole white alabastrum(tetraploid) 1115.410
CNS0095608Whole white alabastrum(tetraploid) 2106.095
CNS0095609Whole white alabastrum(tetraploid) 3739.792
CNS0095610Silvery flower (tetraploid) 1223.120
CNS0095611Silvery flower (tetraploid) 2457.020
CNS0095612Silvery flower (tetraploid) 3318.894
CNS0095613Golden flower (tetraploid) 154.027
CNS0095614Golden flower (tetraploid) 2115.077
CNS0095615Golden flower (tetraploid) 382.672
CRA001975CRR073297Stem 1787.561
CRR073298Stem 2678.747
CRR073299Stem 31235.590
CRR073300Leaf 1318.174
CRR073301Leaf 2332.090
CRR073302Leaf 3496.988
CRR073303Juvenile bud 1301.091
CRR073304Juvenile bud 2499.782
CRR073305Juvenile bud 3289.916
CRR073306Third green 1265.022
CRR073307Third green 2168.115
CRR073308Third green 3191.130
CRR073309Second white 1234.776
CRR073310Second white 270.832
CRR073311Second white 361.925
CRR073312Silver flowering 133.032
CRR073313Silver flowering 237.403
CRR073314Silver flowering 340.070
CRR073315Gold flowering 1310.095
CRR073316Gold flowering 2524.587
CRR073317Gold flowering 3738.732
CRR073318Tawny withering 151.360
CRR073319Tawny withering 235.799
CRR073320Tawny withering 362.599