Detail information of GWHGAAZE002434


Functional Annotation

DatabaseOrthologsE valueAnnotation
NrCDX88598.11.69385E-10BnaA03g10510D [Brassica napus]
trEMBLtr|A0A078DN04|A0A078DN04_BRANA6E-11BnaA03g10510D protein {ECO:0000313|EMBL:CDX88598.1}
TAIR10AT3G19520.20.000002Protein of unknown function (DUF626)

Location And Transcript Sequence (JBrowse)

ScaffoldTypeStartEndStrand
GWHAAZE00000001gene7865147778652989-
GWHAAZE00000001mRNA7865147778652989-
GWHAAZE00000001exon7865249078652989-
GWHAAZE00000001exon7865216078652394-
GWHAAZE00000001exon7865183078651961-
GWHAAZE00000001exon7865147778651662-
GWHAAZE00000001CDS7865249078652989-
GWHAAZE00000001CDS7865216078652394-
GWHAAZE00000001CDS7865183078651961-
GWHAAZE00000001CDS7865147778651662-
Transcript Sequence

Network for GWHGAAZE002434

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist


Functional Module

Module IDFunction Annotation
CFinderModule0143


Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
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Protein Sequence

Gene family

Gene familysubfamily
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KEGG pathway

KO Enzyme pathway mapID
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Gene Ontology

GO term OntologyName

Expression pattern


Expression pattern detail

SRPSampleDescriptionTPM
SRP075780SRR3591705youngest leaf11.170
SRR3591706second leaf10.264
SRR3591707mature leaf6.623
SRR3591708Shoot apex12.594
SRR3591709Stem12.489
SRR3591710White floral bud24.829
SRR3591711White flower26.799
SRR3591712Green floral bud31.417
SRR3591713Yellow flower15.149
SRP173429 SRR8316895Juvenile bud stage 5.741
SRR8316896Juvenile bud stage 10.563
SRR8316897Juvenile bud stage 5.320
SRR8316894Third green stage 1.335
SRR8316900Third green stage 6.197
SRR8316901Third green stage 5.913
SRR8316898Complete white stage 0.107
SRR8316899Complete white stage 0.352
SRR8316903Complete white stage 0.150
SRR8316902Silver flowering stage0.112
SRR8316904Silver flowering stage0.212
SRR8316905Silver flowering stage0.078
SRR8316906Gold flowering stage 0.314
SRR8316907Gold flowering stage 0.123
SRR8316908Gold flowering stage 1.477
SRP132670SRR6706286Control1.737
SRR6706287Light intensity 50%2.045
SRR6706288Light intensity 20%1.907
CNP0000432CNS0095592Slightly white alabastrum(diploid) 16.236
CNS0095593Slightly white alabastrum(diploid) 23.623
CNS0095594Slightly white alabastrum(diploid) 38.039
CNS0095595Whole white alabastrum(diploid) 210.936
CNS0095596Whole white alabastrum(diploid) 310.887
CNS0095597Whole white alabastrum(diploid) 49.068
CNS0095598Silvery flower (diploied) 10.000
CNS0095599Silvery flower (diploied) 20.759
CNS0095600Silvery flower (diploied) 30.367
CNS0095601Golden flower (diploid) 10.159
CNS0095602Golden flower (diploid) 20.156
CNS0095603Golden flower (diploid) 30.139
CNS0095604Slightly white alabastrum(tetraploid) 111.293
CNS0095605Slightly white alabastrum(tetraploid) 29.539
CNS0095606Slightly white alabastrum(tetraploid) 31.257
CNS0095607Whole white alabastrum(tetraploid) 113.901
CNS0095608Whole white alabastrum(tetraploid) 217.421
CNS0095609Whole white alabastrum(tetraploid) 38.894
CNS0095610Silvery flower (tetraploid) 10.921
CNS0095611Silvery flower (tetraploid) 20.714
CNS0095612Silvery flower (tetraploid) 34.123
CNS0095613Golden flower (tetraploid) 10.599
CNS0095614Golden flower (tetraploid) 20.634
CNS0095615Golden flower (tetraploid) 30.333
CRA001975CRR073297Stem 13.867
CRR073298Stem 23.072
CRR073299Stem 31.880
CRR073300Leaf 14.681
CRR073301Leaf 24.074
CRR073302Leaf 30.922
CRR073303Juvenile bud 11.995
CRR073304Juvenile bud 21.752
CRR073305Juvenile bud 30.043
CRR073306Third green 10.567
CRR073307Third green 20.189
CRR073308Third green 30.855
CRR073309Second white 10.000
CRR073310Second white 20.021
CRR073311Second white 30.118
CRR073312Silver flowering 10.607
CRR073313Silver flowering 20.590
CRR073314Silver flowering 30.088
CRR073315Gold flowering 10.945
CRR073316Gold flowering 20.000
CRR073317Gold flowering 30.000
CRR073318Tawny withering 11.052
CRR073319Tawny withering 20.212
CRR073320Tawny withering 31.167