Gene detail

Detail information of GWHGAAZE002469

Functional Annotation

Database	Orthologs	E value	Annotation
Nr	XP_009605137.1	0	PREDICTED: heat shock protein 83 [Nicotiana tomentosiformis]
COG	YP_006763165.1	9E-146	chaperone protein HtpG
Swissprot	tr\|P36183\|ENPL_HORVU	0	Endoplasmin homolog (Precursor)
trEMBL	tr\|F6HHM5\|F6HHM5_VITVI	0	Putative uncharacterized protein {ECO:0000313\|EMBL:CCB51721.1}
TAIR10	AT3G07770.1	0	HEAT SHOCK PROTEIN 89.1

Location And Transcript Sequence (JBrowse)

Scaffold	Type	Start	End	Strand
GWHAAZE00000001	gene	79312053	79317660	+
GWHAAZE00000001	mRNA	79312053	79317660	+
GWHAAZE00000001	exon	79312053	79312313	+
GWHAAZE00000001	exon	79312435	79312550	+
GWHAAZE00000001	exon	79312867	79312992	+
GWHAAZE00000001	exon	79313071	79313164	+
GWHAAZE00000001	exon	79313242	79313325	+
GWHAAZE00000001	exon	79313433	79313576	+
GWHAAZE00000001	exon	79313683	79313796	+
GWHAAZE00000001	exon	79313920	79313979	+
GWHAAZE00000001	exon	79314054	79314161	+
GWHAAZE00000001	exon	79314253	79314357	+
GWHAAZE00000001	exon	79314581	79314721	+
GWHAAZE00000001	exon	79314818	79314910	+
GWHAAZE00000001	exon	79315011	79315088	+
GWHAAZE00000001	exon	79315532	79315786	+
GWHAAZE00000001	exon	79315896	79315998	+
GWHAAZE00000001	exon	79316199	79316373	+
GWHAAZE00000001	exon	79316469	79316574	+
GWHAAZE00000001	exon	79316682	79316771	+
GWHAAZE00000001	exon	79317493	79317660	+
GWHAAZE00000001	CDS	79312053	79312313	+
GWHAAZE00000001	CDS	79312435	79312550	+
GWHAAZE00000001	CDS	79312867	79312992	+
GWHAAZE00000001	CDS	79313071	79313164	+
GWHAAZE00000001	CDS	79313242	79313325	+
GWHAAZE00000001	CDS	79313433	79313576	+
GWHAAZE00000001	CDS	79313683	79313796	+
GWHAAZE00000001	CDS	79313920	79313979	+
GWHAAZE00000001	CDS	79314054	79314161	+
GWHAAZE00000001	CDS	79314253	79314357	+
GWHAAZE00000001	CDS	79314581	79314721	+
GWHAAZE00000001	CDS	79314818	79314910	+
GWHAAZE00000001	CDS	79315011	79315088	+
GWHAAZE00000001	CDS	79315532	79315786	+
GWHAAZE00000001	CDS	79315896	79315998	+
GWHAAZE00000001	CDS	79316199	79316373	+
GWHAAZE00000001	CDS	79316469	79316574	+
GWHAAZE00000001	CDS	79316682	79316771	+
GWHAAZE00000001	CDS	79317493	79317660	+

Transcript Sequence
>GWHTAAZE002473 ATGAAGATTGCAAGACCGCTATCTGACCTTCCAACATGTTCTTTTATTTTACTAAATATCTTTGACCATGAGCAGATTGGAGAGACTGATGCCAAGCCTAGACTGTACTCTGTCTTAACTGCTGGGAGCGGCAATAATGTTGGGTCCACTAAAGCCCTTAACCAGAGAAATGAGTGTTTTCTGGGAAAACGATATGAGTCGACTGCAGCAGCTTCTGATTCATCAGATCTGCCAGCTGAAAAATACGAGTATCAAGCAGAGGTGAGTCGGCTTATGGACCTCATTGTCAACAGCCTATACAGCAACAAGGATGTGTTTCTTCGTGAGCTTATCAGGCATGTTTTTGTACCAACAGTCAATAACTTCTCTGGTTTTTTCAATGCTAGTGATGCACTAGACAAGCTGCGGTTTCTTAGTGTTACTCAACCCGAGCTTGCAAAGGATGGAGTTGATCTAGATATCCGTATCAGCACTGATAAAGATAATGGAATAATTACTATCGCGGATTCTGGTATTGGTATGACCCGAGAAGAACTTGTTGATTGTCTGGGAACTATTGCACAAAGTGGTACTGCAAAGTTTTTAAAAGCATTGAAGGATAGCAAGGATTCTGGATCCGACAGCAATTTGATTGGTCAATTTGGTGTGGGATTTTATTCAGCCTTTTTAGTTTCAGATAAGGTGGTTGTCTCAACAAAGAGCCCAAAATCCGATAAGCAATATGTATGGGAAGGAGAGGCCAATTCGAGCTCATACACTATTCGTGAGGAGACTGAACCTGAGAAGCTCATACCTAGAGGGACCTGCCTCACATTATATCTCAAGCGTGACGACAAAGGTTTTGCACATCCTGAAAAGATTCAAAAGCTCGTGAAAAACTATTCGCAGTTTGTTTCATTCCCAATTTACACCTGGCAAGAAAAAGGATATACTAAAGAGGTTGAAGTAGATGATGATCCAACTGAGGCTAAACAGGATGATCAAGATGAAAAAGTTGAGGTTTATGGTGACTTTTTGTTCTTGTTACAACAGAAGAAGAAGAAAACAAAGAAAATAGTTGAGAAGTACTGGGATTGGGAGCTCACAAATGAGACCCAGCCAATATGGCTTCGGAACCCTAAGGAAGTCTCTGCAGAGGATTATAATGAGTTCTATAAGAAGACCTTCAATGAATACTTGGATCCTTTGGCATCTTCTCACTTTACAACAGAGGGTGAGGTGGAGTTCAGGTCTATCCTCTACGTGCCAGCAGTTGCTCCCACAGGGAAGGATGATGTAGTCAATCCAAAAACAAAGAATATAAGGCTCTATGTTAAACGCGTGTTCATTTCAGATGACTTTGACGGAGAACTGTTCCCAAGGTATCTGAGCTTTGTGAAAGGTGTGGTGGACTCAAATGATCTTCCTCTAAATGTGTCCCGTGAAATTCTCCAGGAAAGTCGGATTGTACGGATAATGAGGAAGCGTTTGGTGCGAAAAGCCTTTGACATGATTCTGGGCATATCCATGAGCGAAAATAGAGATGATTATGAGAGGTTCTGGGAGAACTTTGGAAAGCACCTGAAATTGGGCTGCATTGAAGATCGTGAAAACCACAAGCGTCTTGCTCCACTGCTTCGTTTTTTCTCTTCACAGAGTGAAGAAGAGATGATCAGTTTGGACGAATATGTCGAGAACATGAAGCCTGAGCAGAAGGATATTTATTACCTAGCTTCTGATAGTGTTACAAGTGCAAAGAACACACCCTTCTTAGAGAAACTTCTTGAGAAAGATCTTGAGGTGTTGTTCTTAGTTGACCCCATTGACGAGGTTGCCGTCCAGAACCTGAAATCATACAAAGAAAAGAATTTTGTTGATATTAGCAAGGAAGACCTTGATTTGGGTGATAAGAATGAGGAGAAGGAAAAAGAGATGAAGCAGGAATTTGGTCAAACTTGCGATTGGATAAAGCAACGGTTAGGTGACAAAGTTGCCAGCGTTCAAATCTCGAATCGCCTTAGTACCTCACCCTGTGTTCTTGTATCTGGCAAATTTGGTTGGTCTGCCAACATGGAGAGGTTGATGAAGGCACAGACTATGGGTGATAACTCTAGCCTGGACTTTATGAGGGGCAGGAGGGTCTTTGAGATTAATCCTCAGCACCCAATCATTAAAACCTTGGATGCTGCGTGCAAGAGCAGTCCAAACGATGAAGAAGCTTTGAGAGCTATTGATCTCTTGTACGACACTGCGTTGGTTTCTAGCGGTTTTACTCCGGAGAGCCCAGCACAGCTTGGTGGGAAGATATATGAGATGATGGGCATGGCTCTTTCGGGCAGATGGGGATCAGCGGCACCTGTTGATGCTGGCGGCTTTCAACAGATATCACAAACGCCAGAAGCCGAGGTGATTGAGCCGGTTGAAGCTGGTTCACAGAAATGA

Network for GWHGAAZE002469

Network category	Network	Top300 PCC genelist
Coexpression Positive	Network	Top300 PCC genelist
Coexpression Negative	Network	Top300 PCC genelist

Functional Module

Module ID	Function Annotation

Protein Structure

Pfam accession	Pfam name	Alignment start	Alignment end	E-value
PF02518.27	HATPase_c	126	276	1.00E-08
PF00183.19	HSP90	281	772	5.30E-193

Protein Sequence

Gene family

Gene family	subfamily
--	--

KEGG pathway

KO	Enzyme	pathway	mapID
K09487	HSP90B, TRA1	Protein processing in endoplasmic reticulum	map04141
		PI3K-Akt signaling pathway	map04151
		IL-17 signaling pathway	map04657
		Estrogen signaling pathway	map04915
		Thyroid hormone synthesis	map04918
		Plant-pathogen interaction	map04626

Gene Ontology

GO term	Ontology	Name
GO:0006457	biological_process	protein folding
GO:0005524	molecular_function	ATP binding
GO:0051082	molecular_function	unfolded protein binding

Expression pattern

Expression pattern detail

SRP	Sample	Description	TPM
SRP075780	SRR3591705	youngest leaf	28.571
	SRR3591706	second leaf	4.685
	SRR3591707	mature leaf	7.055
	SRR3591708	Shoot apex	30.265
	SRR3591709	Stem	18.382
	SRR3591710	White floral bud	18.208
	SRR3591711	White flower	61.666
	SRR3591712	Green floral bud	47.062
	SRR3591713	Yellow flower	28.676
SRP173429	SRR8316895	Juvenile bud stage	38.671
	SRR8316896	Juvenile bud stage	66.960
	SRR8316897	Juvenile bud stage	33.023
	SRR8316894	Third green stage	22.280
	SRR8316900	Third green stage	67.211
	SRR8316901	Third green stage	45.052
	SRR8316898	Complete white stage	4.496
	SRR8316899	Complete white stage	23.894
	SRR8316903	Complete white stage	8.480
	SRR8316902	Silver flowering stage	10.722
	SRR8316904	Silver flowering stage	10.523
	SRR8316905	Silver flowering stage	4.336
	SRR8316906	Gold flowering stage	21.879
	SRR8316907	Gold flowering stage	21.529
	SRR8316908	Gold flowering stage	27.652
SRP132670	SRR6706286	Control	36.805
	SRR6706287	Light intensity 50%	38.429
	SRR6706288	Light intensity 20%	41.453
CNP0000432	CNS0095592	Slightly white alabastrum(diploid) 1	44.750
	CNS0095593	Slightly white alabastrum(diploid) 2	52.463
	CNS0095594	Slightly white alabastrum(diploid) 3	44.428
	CNS0095595	Whole white alabastrum(diploid) 2	42.274
	CNS0095596	Whole white alabastrum(diploid) 3	52.571
	CNS0095597	Whole white alabastrum(diploid) 4	31.840
	CNS0095598	Silvery flower (diploied) 1	28.450
	CNS0095599	Silvery flower (diploied) 2	30.156
	CNS0095600	Silvery flower (diploied) 3	33.256
	CNS0095601	Golden flower (diploid) 1	24.037
	CNS0095602	Golden flower (diploid) 2	26.149
	CNS0095603	Golden flower (diploid) 3	26.158
	CNS0095604	Slightly white alabastrum(tetraploid) 1	70.588
	CNS0095605	Slightly white alabastrum(tetraploid) 2	62.261
	CNS0095606	Slightly white alabastrum(tetraploid) 3	120.961
	CNS0095607	Whole white alabastrum(tetraploid) 1	30.753
	CNS0095608	Whole white alabastrum(tetraploid) 2	29.728
	CNS0095609	Whole white alabastrum(tetraploid) 3	112.135
	CNS0095610	Silvery flower (tetraploid) 1	56.988
	CNS0095611	Silvery flower (tetraploid) 2	55.038
	CNS0095612	Silvery flower (tetraploid) 3	59.303
	CNS0095613	Golden flower (tetraploid) 1	26.369
	CNS0095614	Golden flower (tetraploid) 2	39.412
	CNS0095615	Golden flower (tetraploid) 3	10.308
CRA001975	CRR073297	Stem 1	63.543
	CRR073298	Stem 2	57.283
	CRR073299	Stem 3	52.037
	CRR073300	Leaf 1	59.004
	CRR073301	Leaf 2	52.834
	CRR073302	Leaf 3	57.219
	CRR073303	Juvenile bud 1	68.614
	CRR073304	Juvenile bud 2	33.419
	CRR073305	Juvenile bud 3	55.246
	CRR073306	Third green 1	6.854
	CRR073307	Third green 2	4.246
	CRR073308	Third green 3	8.074
	CRR073309	Second white 1	27.243
	CRR073310	Second white 2	24.435
	CRR073311	Second white 3	19.208
	CRR073312	Silver flowering 1	13.177
	CRR073313	Silver flowering 2	15.793
	CRR073314	Silver flowering 3	8.995
	CRR073315	Gold flowering 1	25.249
	CRR073316	Gold flowering 2	43.684
	CRR073317	Gold flowering 3	23.187
	CRR073318	Tawny withering 1	26.429
	CRR073319	Tawny withering 2	27.687
	CRR073320	Tawny withering 3	37.767