Gene detail

Detail information of GWHGAAZE002481

Functional Annotation

Database	Orthologs	E value	Annotation
Nr	EYU20731.1	0	hypothetical protein MIMGU_mgv1a026909mg, partial [Erythranthe guttata]
trEMBL	tr\|A0A022PY38\|A0A022PY38_ERYGU	0	Uncharacterized protein {ECO:0000313\|EMBL:EYU20731.1} (Fragment)
TAIR10	AT2G05320.1	6E-158	beta-1,2-N-acetylglucosaminyltransferase II

Location And Transcript Sequence (JBrowse)

Scaffold	Type	Start	End	Strand
GWHAAZE00000001	gene	79612026	79613057	-
GWHAAZE00000001	mRNA	79612026	79613057	-
GWHAAZE00000001	exon	79612026	79613057	-
GWHAAZE00000001	CDS	79612026	79613057	-

Transcript Sequence
>GWHTAAZE002485 ATGGATTTGTACCCAAATTTGCCAAAGGGTCATGTTGTAATTGTTCTTTATGTTCATAACCGGCCTCAATATCTCCAGTTAGTTGTTAAAAGCCTCTCTAAAGTAGTGGGTATTAGTGAAACTCTATTGATTGTTAGTCATGATGGGTATTTCGAAGAGATGAACAAGATTGTGGAAGGTATTAAGTTTTGCCGAGTGAAACAAATTTTTGCCCCTTACTCACCCCATGTGTTTACCAATAGCTTTCCGGGAGAATCTTTGAAAGATTGTAAGGATAAAGAGGACCCGATAAAGAATCATTGTGAGGGGAACCCGGATCAATATGGGAATCACCGGTCACCAAAGATTGTGTCGTTGAAGCACCATTGGTGGTGGATGATGAACACGGTGTGGGATGGGCTCGAGGAGACTAGTAAGCATTCGGGTCATGTTCTTTTCATCGAAGAGGATCACTTCATTTTCCCAAACGCGTATAAGAACTTGCAGTTGCTTATAGATTTGAAGCCCAAGAGGTGCCCTAATTGCTACGCAGTGAATTTGGCCCCATGTGATGTGAAGTCGAGGGGAGAGGGGTGGGAGAGTTTGATTGCTGAGCGAATGGGCAATGTGGGTTATGCGTTTAACCGGACTGTGTGGAGGAAAATACGTAGGAAAGCAAGAGAATTCTGTTTCTTTGATGATTATAACTGGGATATTACTATGTGGGCTGAAGTTTATCCTTCATTTGGGGGTCCGGTTTACACATTACGGGGGCCTAGGACTAGCGCAGTTCACTTTGGGAAATGCGGGTTGCATCAGGGTCAGGCCGAGAGAGCTACGTGTATTGATAATGGGATGGTGAAGATTGACGTAGATGAGATCGATCGGGTTGTTAACGTAAAAGAAAAATGGGGAGTACATGTGTTTGAGAACCAAGCGGGTTATCAGGCCGGGTTTAAGGGATGGGGAGGGTGGGGAGATATAAGGGATCGCCAATTGTGCTTGGAATTTGCCAACATGTATCACTCAAGAAGCAAACGATCTCCCATCTAA

Network for GWHGAAZE002481

Network category	Network	Top300 PCC genelist
Coexpression Positive	Network	Top300 PCC genelist
Coexpression Negative	Network	Top300 PCC genelist

Functional Module

Module ID	Function Annotation

Protein Structure

Pfam accession	Pfam name	Alignment start	Alignment end	E-value
PF05060.15	MGAT2	2	327	3.20E-103

Protein Sequence

Gene family

Gene family	subfamily
--	--

KEGG pathway

KO	Enzyme	pathway	mapID
K00736	MGAT2	Metabolic pathways	map01100
		N-Glycan biosynthesis	map00510
		Various types of N-glycan biosynthesis	map00513

Gene Ontology

GO term	Ontology	Name
GO:0009312	biological_process	oligosaccharide biosynthetic process
GO:0005795	cellular_component	Golgi stack
GO:0016021	cellular_component	integral component of membrane
GO:0008455	molecular_function	alpha-1,6-mannosylglycoprotein 2-beta-N-acetylglucosaminyltransferase activity

Expression pattern

Expression pattern detail

SRP	Sample	Description	TPM
SRP075780	SRR3591705	youngest leaf	20.977
	SRR3591706	second leaf	12.753
	SRR3591707	mature leaf	11.741
	SRR3591708	Shoot apex	16.978
	SRR3591709	Stem	26.600
	SRR3591710	White floral bud	10.656
	SRR3591711	White flower	14.730
	SRR3591712	Green floral bud	12.964
	SRR3591713	Yellow flower	12.909
SRP173429	SRR8316895	Juvenile bud stage	11.901
	SRR8316896	Juvenile bud stage	10.652
	SRR8316897	Juvenile bud stage	6.295
	SRR8316894	Third green stage	5.120
	SRR8316900	Third green stage	9.725
	SRR8316901	Third green stage	10.797
	SRR8316898	Complete white stage	3.276
	SRR8316899	Complete white stage	12.836
	SRR8316903	Complete white stage	5.229
	SRR8316902	Silver flowering stage	5.834
	SRR8316904	Silver flowering stage	4.811
	SRR8316905	Silver flowering stage	2.755
	SRR8316906	Gold flowering stage	13.631
	SRR8316907	Gold flowering stage	10.255
	SRR8316908	Gold flowering stage	15.054
SRP132670	SRR6706286	Control	16.284
	SRR6706287	Light intensity 50%	13.046
	SRR6706288	Light intensity 20%	12.954
CNP0000432	CNS0095592	Slightly white alabastrum(diploid) 1	11.768
	CNS0095593	Slightly white alabastrum(diploid) 2	12.305
	CNS0095594	Slightly white alabastrum(diploid) 3	10.763
	CNS0095595	Whole white alabastrum(diploid) 2	9.809
	CNS0095596	Whole white alabastrum(diploid) 3	6.269
	CNS0095597	Whole white alabastrum(diploid) 4	6.516
	CNS0095598	Silvery flower (diploied) 1	16.376
	CNS0095599	Silvery flower (diploied) 2	13.943
	CNS0095600	Silvery flower (diploied) 3	12.240
	CNS0095601	Golden flower (diploid) 1	18.273
	CNS0095602	Golden flower (diploid) 2	12.659
	CNS0095603	Golden flower (diploid) 3	13.473
	CNS0095604	Slightly white alabastrum(tetraploid) 1	9.811
	CNS0095605	Slightly white alabastrum(tetraploid) 2	6.627
	CNS0095606	Slightly white alabastrum(tetraploid) 3	20.823
	CNS0095607	Whole white alabastrum(tetraploid) 1	6.367
	CNS0095608	Whole white alabastrum(tetraploid) 2	5.242
	CNS0095609	Whole white alabastrum(tetraploid) 3	9.981
	CNS0095610	Silvery flower (tetraploid) 1	12.473
	CNS0095611	Silvery flower (tetraploid) 2	5.492
	CNS0095612	Silvery flower (tetraploid) 3	4.825
	CNS0095613	Golden flower (tetraploid) 1	9.145
	CNS0095614	Golden flower (tetraploid) 2	11.150
	CNS0095615	Golden flower (tetraploid) 3	3.192
CRA001975	CRR073297	Stem 1	7.254
	CRR073298	Stem 2	6.665
	CRR073299	Stem 3	6.126
	CRR073300	Leaf 1	6.224
	CRR073301	Leaf 2	7.378
	CRR073302	Leaf 3	5.602
	CRR073303	Juvenile bud 1	4.203
	CRR073304	Juvenile bud 2	5.486
	CRR073305	Juvenile bud 3	6.067
	CRR073306	Third green 1	1.944
	CRR073307	Third green 2	2.126
	CRR073308	Third green 3	2.306
	CRR073309	Second white 1	1.755
	CRR073310	Second white 2	1.251
	CRR073311	Second white 3	1.720
	CRR073312	Silver flowering 1	3.790
	CRR073313	Silver flowering 2	4.547
	CRR073314	Silver flowering 3	3.224
	CRR073315	Gold flowering 1	5.492
	CRR073316	Gold flowering 2	5.493
	CRR073317	Gold flowering 3	5.665
	CRR073318	Tawny withering 1	11.899
	CRR073319	Tawny withering 2	10.988
	CRR073320	Tawny withering 3	10.853