Detail information of GWHGAAZE002528


Functional Annotation

DatabaseOrthologsE valueAnnotation
NrCAN71213.18.97462E-43hypothetical protein VITISV_039503 [Vitis vinifera]
COGYP_008545869.10.0000007glutathione S-transferase domain-containing protein
Swissprottr|Q03666|GSTX4_TOBAC4E-43Probable glutathione S-transferase
trEMBLtr|A5AF45|A5AF45_VITVI3E-43Putative uncharacterized protein {ECO:0000313|EMBL:CAN71213.1}
TAIR10AT1G53680.11E-31glutathione S-transferase TAU 28

Location And Transcript Sequence (JBrowse)

ScaffoldTypeStartEndStrand
GWHAAZE00000001gene8063746980637774-
GWHAAZE00000001mRNA8063746980637774-
GWHAAZE00000001exon8063746980637774-
GWHAAZE00000001CDS8063746980637774-
Transcript Sequence

Network for GWHGAAZE002528

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist


Functional Module

Module IDFunction Annotation


Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF13410.7GST_C_211753.90E-10
Protein Sequence

Gene family

Gene familysubfamily
----

KEGG pathway

KO Enzyme pathway mapID
K00799GST, gst Metabolic pathways map01100
Glutathione metabolismmap00480
Metabolism of xenobiotics by cytochrome P450map00980
Drug metabolism - cytochrome P450map00982
Drug metabolism - other enzymesmap00983
Longevity regulating pathway - wormmap04212

Gene Ontology

GO term OntologyName

Expression pattern


Expression pattern detail

SRPSampleDescriptionTPM
SRP075780SRR3591705youngest leaf0.929
SRR3591706second leaf28.183
SRR3591707mature leaf25.282
SRR3591708Shoot apex27.608
SRR3591709Stem1.911
SRR3591710White floral bud1.798
SRR3591711White flower2.463
SRR3591712Green floral bud2.595
SRR3591713Yellow flower1.778
SRP173429 SRR8316895Juvenile bud stage 9.861
SRR8316896Juvenile bud stage 5.076
SRR8316897Juvenile bud stage 2.555
SRR8316894Third green stage 1.837
SRR8316900Third green stage 6.833
SRR8316901Third green stage 4.109
SRR8316898Complete white stage 2.807
SRR8316899Complete white stage 4.947
SRR8316903Complete white stage 2.882
SRR8316902Silver flowering stage1.883
SRR8316904Silver flowering stage1.238
SRR8316905Silver flowering stage0.617
SRR8316906Gold flowering stage 2.312
SRR8316907Gold flowering stage 1.211
SRR8316908Gold flowering stage 2.737
SRP132670SRR6706286Control7.047
SRR6706287Light intensity 50%7.540
SRR6706288Light intensity 20%7.820
CNP0000432CNS0095592Slightly white alabastrum(diploid) 18.521
CNS0095593Slightly white alabastrum(diploid) 25.733
CNS0095594Slightly white alabastrum(diploid) 37.638
CNS0095595Whole white alabastrum(diploid) 23.001
CNS0095596Whole white alabastrum(diploid) 33.094
CNS0095597Whole white alabastrum(diploid) 42.990
CNS0095598Silvery flower (diploied) 15.736
CNS0095599Silvery flower (diploied) 21.504
CNS0095600Silvery flower (diploied) 32.951
CNS0095601Golden flower (diploid) 11.032
CNS0095602Golden flower (diploid) 23.394
CNS0095603Golden flower (diploid) 32.868
CNS0095604Slightly white alabastrum(tetraploid) 11.782
CNS0095605Slightly white alabastrum(tetraploid) 22.650
CNS0095606Slightly white alabastrum(tetraploid) 39.447
CNS0095607Whole white alabastrum(tetraploid) 10.340
CNS0095608Whole white alabastrum(tetraploid) 20.285
CNS0095609Whole white alabastrum(tetraploid) 32.506
CNS0095610Silvery flower (tetraploid) 12.855
CNS0095611Silvery flower (tetraploid) 22.045
CNS0095612Silvery flower (tetraploid) 32.110
CNS0095613Golden flower (tetraploid) 11.643
CNS0095614Golden flower (tetraploid) 23.617
CNS0095615Golden flower (tetraploid) 30.528
CRA001975CRR073297Stem 15.155
CRR073298Stem 22.908
CRR073299Stem 32.570
CRR073300Leaf 13.716
CRR073301Leaf 24.942
CRR073302Leaf 32.473
CRR073303Juvenile bud 12.313
CRR073304Juvenile bud 20.491
CRR073305Juvenile bud 31.894
CRR073306Third green 10.107
CRR073307Third green 22.047
CRR073308Third green 31.180
CRR073309Second white 10.322
CRR073310Second white 20.573
CRR073311Second white 30.216
CRR073312Silver flowering 10.135
CRR073313Silver flowering 20.000
CRR073314Silver flowering 30.000
CRR073315Gold flowering 13.236
CRR073316Gold flowering 24.052
CRR073317Gold flowering 34.455
CRR073318Tawny withering 115.065
CRR073319Tawny withering 214.879
CRR073320Tawny withering 33.832