Detail information of GWHGAAZE002530


Functional Annotation

DatabaseOrthologsE valueAnnotation
NrCAN83043.11.96438E-73hypothetical protein VITISV_027913 [Vitis vinifera]
COGYP_007096787.12E-19glutathione S-transferase
Swissprottr|Q8GYM1|GSTUM_ARATH2E-70Glutathione S-transferase U22
trEMBLtr|A5BAQ8|A5BAQ8_VITVI7E-74Putative uncharacterized protein {ECO:0000313|EMBL:CAN83043.1}
TAIR10AT1G78340.11E-56glutathione S-transferase TAU 22

Location And Transcript Sequence (JBrowse)

ScaffoldTypeStartEndStrand
GWHAAZE00000001gene8067378280674639-
GWHAAZE00000001mRNA8067378280674639-
GWHAAZE00000001exon8067378280673916-
GWHAAZE00000001exon8067432580674639-
GWHAAZE00000001CDS8067432580674639-
GWHAAZE00000001CDS8067378280673916-
Transcript Sequence

Network for GWHGAAZE002530

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist


Functional Module

Module IDFunction Annotation


Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF02798.21GST_N4762.90E-19
Protein Sequence

Gene family

Gene familysubfamily
----

KEGG pathway

KO Enzyme pathway mapID
K00799GST, gst Metabolic pathways map01100
Glutathione metabolismmap00480
Metabolism of xenobiotics by cytochrome P450map00980
Drug metabolism - cytochrome P450map00982
Drug metabolism - other enzymesmap00983
Longevity regulating pathway - wormmap04212

Gene Ontology

GO term OntologyName
GO:0005515molecular_functionprotein binding

Expression pattern


Expression pattern detail

SRPSampleDescriptionTPM
SRP075780SRR3591705youngest leaf0.000
SRR3591706second leaf0.000
SRR3591707mature leaf0.000
SRR3591708Shoot apex0.185
SRR3591709Stem0.170
SRR3591710White floral bud2.354
SRR3591711White flower0.200
SRR3591712Green floral bud0.000
SRR3591713Yellow flower1.718
SRP173429 SRR8316895Juvenile bud stage 0.139
SRR8316896Juvenile bud stage 0.379
SRR8316897Juvenile bud stage 0.034
SRR8316894Third green stage 0.000
SRR8316900Third green stage 0.000
SRR8316901Third green stage 0.117
SRR8316898Complete white stage 0.000
SRR8316899Complete white stage 0.230
SRR8316903Complete white stage 0.000
SRR8316902Silver flowering stage0.104
SRR8316904Silver flowering stage0.042
SRR8316905Silver flowering stage0.196
SRR8316906Gold flowering stage 4.269
SRR8316907Gold flowering stage 3.605
SRR8316908Gold flowering stage 6.244
SRP132670SRR6706286Control0.057
SRR6706287Light intensity 50%0.000
SRR6706288Light intensity 20%0.000
CNP0000432CNS0095592Slightly white alabastrum(diploid) 10.087
CNS0095593Slightly white alabastrum(diploid) 20.000
CNS0095594Slightly white alabastrum(diploid) 30.812
CNS0095595Whole white alabastrum(diploid) 20.000
CNS0095596Whole white alabastrum(diploid) 30.621
CNS0095597Whole white alabastrum(diploid) 40.000
CNS0095598Silvery flower (diploied) 10.000
CNS0095599Silvery flower (diploied) 20.059
CNS0095600Silvery flower (diploied) 30.209
CNS0095601Golden flower (diploid) 10.000
CNS0095602Golden flower (diploid) 20.233
CNS0095603Golden flower (diploid) 30.027
CNS0095604Slightly white alabastrum(tetraploid) 10.000
CNS0095605Slightly white alabastrum(tetraploid) 20.093
CNS0095606Slightly white alabastrum(tetraploid) 30.000
CNS0095607Whole white alabastrum(tetraploid) 10.323
CNS0095608Whole white alabastrum(tetraploid) 20.356
CNS0095609Whole white alabastrum(tetraploid) 30.000
CNS0095610Silvery flower (tetraploid) 10.017
CNS0095611Silvery flower (tetraploid) 20.000
CNS0095612Silvery flower (tetraploid) 30.034
CNS0095613Golden flower (tetraploid) 10.900
CNS0095614Golden flower (tetraploid) 20.075
CNS0095615Golden flower (tetraploid) 30.061
CRA001975CRR073297Stem 10.024
CRR073298Stem 20.146
CRR073299Stem 30.426
CRR073300Leaf 10.000
CRR073301Leaf 20.000
CRR073302Leaf 30.182
CRR073303Juvenile bud 10.000
CRR073304Juvenile bud 20.000
CRR073305Juvenile bud 30.000
CRR073306Third green 10.000
CRR073307Third green 20.000
CRR073308Third green 30.000
CRR073309Second white 10.000
CRR073310Second white 20.600
CRR073311Second white 30.233
CRR073312Silver flowering 10.000
CRR073313Silver flowering 21.122
CRR073314Silver flowering 30.000
CRR073315Gold flowering 10.000
CRR073316Gold flowering 20.234
CRR073317Gold flowering 30.186
CRR073318Tawny withering 10.000
CRR073319Tawny withering 21.080
CRR073320Tawny withering 30.000