Gene detail

Detail information of GWHGAAZE002536

Functional Annotation

Database	Orthologs	E value	Annotation
Nr	XP_010245118.1	0	PREDICTED: probable sugar phosphate/phosphate translocator At3g14410 [Nelumbo nucifera]
Swissprot	tr\|Q94EI9\|PT314_ARATH	4E-179	Probable sugar phosphate/phosphate translocator At3g14410
trEMBL	tr\|A0A067JL85\|A0A067JL85_JATCU	0	Uncharacterized protein {ECO:0000313\|EMBL:KDP24721.1}
TAIR10	AT3G14410.1	2E-124	Nucleotide/sugar transporter family protein

Location And Transcript Sequence (JBrowse)

Scaffold	Type	Start	End	Strand
GWHAAZE00000001	gene	80825588	80830683	+
GWHAAZE00000001	mRNA	80825588	80830683	+
GWHAAZE00000001	exon	80825588	80825701	+
GWHAAZE00000001	exon	80826116	80826150	+
GWHAAZE00000001	exon	80826476	80826588	+
GWHAAZE00000001	exon	80827147	80827408	+
GWHAAZE00000001	exon	80828036	80828301	+
GWHAAZE00000001	exon	80829444	80829606	+
GWHAAZE00000001	exon	80830380	80830683	+
GWHAAZE00000001	CDS	80825588	80825701	+
GWHAAZE00000001	CDS	80826116	80826150	+
GWHAAZE00000001	CDS	80826476	80826588	+
GWHAAZE00000001	CDS	80827147	80827408	+
GWHAAZE00000001	CDS	80828036	80828301	+
GWHAAZE00000001	CDS	80829444	80829571	+
GWHAAZE00000001	three_prime_UTR	80829572	80829606	+
GWHAAZE00000001	three_prime_UTR	80830380	80830683	+

Transcript Sequence
>GWHTAAZE002540 ATGCAGTGGGTTTTGTCATCGAAAGAGATAAACTTTCCGTATCCTCTTGGATTAACCCTACTCCACATGGTCTTCTCCTCTGTGTTATGTTTCACACTTACCAAAGTTCTGAAGATTATGAAAGTCGAGGAAGGGATGACTGCAGAAATATATGCAACATCCGTCATCCCAATTGGTGCAATGTTTGCAATGACTCTTTGGCTTGGAAACACTGCTTACCTTTATATATCTGTTTCATTTGCACAAATGTTGAAAGCAATAATGCCAGTAGCTGTTTTCATTCTTGGAGTAGTAGCAGGACTCGAAGTGATGAATTTCAGGATGCTTCTCATAATGTCAGTGATAAGTTTTGGAGTTCTGGTGGCTTCGTATGGGGAATTAGATATTAACTGGGTTGGTGTTGTTTACCAAATGGGAGGTGTTGTTGGAGAAGCTTTGAGGCTTATATTCATGGAGATTCTGGTTAAAAGGAAGGGTATCAAACTGAATCCCATATCTGTCATGTACTATGTTAGCCCCTGCAGCGCCCTTTGCTTGTTCATTCCGTGGATTTTTCTGGAGAAGCCAAAGATGGATGCACAGTCATGGAACTTTCATCCTCTCGTGCTAACCCTCAACTCTCTCTGTACTTTTGCTCTCAACCTTTCTGTTTTCCTTGTCATCTCGCATACGAGTGCTTTGACGATTCGTGTTGCTGGAGTTGTCAAGGATTGGGTGGTTGTCTTATTATCAGCCCTTTTGTTTGCGGATACGAAGCTCACTCTCATAAACCTGTTTGGTTATGCCATTGCCATTGCTGGTGTAGCTGCTTACAATAACCATAAGTTGAAAAAGGAAGTGACTCGGGTCGGCTCCAATGAGTCTCAACACCCTGAATCTATTCCATTGGCTTCCTCCTCATCAACCTCTCAAGACTAGATGTATATGAAGCACAGTCTCACGTGTATTGTAAGATGTTCTATATCCAGGATTTTTTTGGAAAGACCACAGCATTTGTAAGTTGTGTTAAGAAGCTGGTATTATTCATTTTAGGTAAAGCGAAACTGCTAGAGCCAAAGTTATAGTGAAACTCAAATACTCTTTTGTACTACTAAGTTTTCGACGTTATTGGAAAAGTCCAGTGTTACAATTGATGACAATAGAGGTTTGTTAATTGTTTGAATTCTCGACCTGTATACATTTTGCATTCAGCTGCCTTCTAAATCCATTGCGTTTGCCTTTGTTTTAAGAAGCAGCATATATATAGGAATTTATTTA

Network for GWHGAAZE002536

Network category	Network	Top300 PCC genelist
Coexpression Positive	Network	Top300 PCC genelist
Coexpression Negative	Network	Top300 PCC genelist

Functional Module

Module ID	Function Annotation
CFinderModule0149

Protein Structure

Pfam accession	Pfam name	Alignment start	Alignment end	E-value
PF03151.17	TPT	12	272	1.40E-25

Protein Sequence

Gene family

Gene family	subfamily
--	--

KEGG pathway

KO	Enzyme	pathway	mapID
--	--	--	--

Gene Ontology

GO term	Ontology	Name

Expression pattern

Expression pattern detail

SRP	Sample	Description	TPM
SRP075780	SRR3591705	youngest leaf	15.801
	SRR3591706	second leaf	9.443
	SRR3591707	mature leaf	4.791
	SRR3591708	Shoot apex	11.724
	SRR3591709	Stem	12.001
	SRR3591710	White floral bud	9.916
	SRR3591711	White flower	7.967
	SRR3591712	Green floral bud	14.522
	SRR3591713	Yellow flower	7.354
SRP173429	SRR8316895	Juvenile bud stage	9.432
	SRR8316896	Juvenile bud stage	13.662
	SRR8316897	Juvenile bud stage	6.023
	SRR8316894	Third green stage	6.080
	SRR8316900	Third green stage	16.255
	SRR8316901	Third green stage	14.969
	SRR8316898	Complete white stage	8.758
	SRR8316899	Complete white stage	20.773
	SRR8316903	Complete white stage	11.003
	SRR8316902	Silver flowering stage	4.553
	SRR8316904	Silver flowering stage	7.332
	SRR8316905	Silver flowering stage	3.560
	SRR8316906	Gold flowering stage	7.933
	SRR8316907	Gold flowering stage	6.475
	SRR8316908	Gold flowering stage	7.914
SRP132670	SRR6706286	Control	5.775
	SRR6706287	Light intensity 50%	6.315
	SRR6706288	Light intensity 20%	8.018
CNP0000432	CNS0095592	Slightly white alabastrum(diploid) 1	13.535
	CNS0095593	Slightly white alabastrum(diploid) 2	13.303
	CNS0095594	Slightly white alabastrum(diploid) 3	10.161
	CNS0095595	Whole white alabastrum(diploid) 2	11.739
	CNS0095596	Whole white alabastrum(diploid) 3	9.353
	CNS0095597	Whole white alabastrum(diploid) 4	11.822
	CNS0095598	Silvery flower (diploied) 1	7.548
	CNS0095599	Silvery flower (diploied) 2	7.685
	CNS0095600	Silvery flower (diploied) 3	9.204
	CNS0095601	Golden flower (diploid) 1	6.384
	CNS0095602	Golden flower (diploid) 2	7.775
	CNS0095603	Golden flower (diploid) 3	8.806
	CNS0095604	Slightly white alabastrum(tetraploid) 1	8.769
	CNS0095605	Slightly white alabastrum(tetraploid) 2	6.912
	CNS0095606	Slightly white alabastrum(tetraploid) 3	15.786
	CNS0095607	Whole white alabastrum(tetraploid) 1	7.515
	CNS0095608	Whole white alabastrum(tetraploid) 2	6.200
	CNS0095609	Whole white alabastrum(tetraploid) 3	9.355
	CNS0095610	Silvery flower (tetraploid) 1	7.241
	CNS0095611	Silvery flower (tetraploid) 2	8.223
	CNS0095612	Silvery flower (tetraploid) 3	6.071
	CNS0095613	Golden flower (tetraploid) 1	3.122
	CNS0095614	Golden flower (tetraploid) 2	5.555
	CNS0095615	Golden flower (tetraploid) 3	2.622
CRA001975	CRR073297	Stem 1	8.712
	CRR073298	Stem 2	8.159
	CRR073299	Stem 3	9.564
	CRR073300	Leaf 1	11.794
	CRR073301	Leaf 2	12.500
	CRR073302	Leaf 3	8.847
	CRR073303	Juvenile bud 1	14.271
	CRR073304	Juvenile bud 2	11.365
	CRR073305	Juvenile bud 3	13.292
	CRR073306	Third green 1	5.353
	CRR073307	Third green 2	4.441
	CRR073308	Third green 3	4.465
	CRR073309	Second white 1	5.577
	CRR073310	Second white 2	3.962
	CRR073311	Second white 3	2.586
	CRR073312	Silver flowering 1	3.483
	CRR073313	Silver flowering 2	2.809
	CRR073314	Silver flowering 3	2.641
	CRR073315	Gold flowering 1	3.678
	CRR073316	Gold flowering 2	6.247
	CRR073317	Gold flowering 3	4.154
	CRR073318	Tawny withering 1	11.799
	CRR073319	Tawny withering 2	13.301
	CRR073320	Tawny withering 3	10.803