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Detail information of GWHGAAZE002539
Functional Annotation
Database
Orthologs
E value
Annotation
Nr
XP_009344332.1
0
PREDICTED: chitobiosyldiphosphodolichol beta-mannosyltransferase-like isoform X1 [Pyrus x bretschneideri]
trEMBL
tr|A0A068UC85|A0A068UC85_COFCA
0
Coffea canephora DH200=94 genomic scaffold, scaffold_19 {ECO:0000313|EMBL:CDP06106.1}
TAIR10
AT1G16570.1
3E-179
UDP-Glycosyltransferase superfamily protein
Location And Transcript Sequence
(JBrowse)
Scaffold
Type
Start
End
Strand
GWHAAZE00000001
gene
80846025
80854931
+
GWHAAZE00000001
mRNA
80846025
80854931
+
GWHAAZE00000001
exon
80846025
80846031
+
GWHAAZE00000001
exon
80846197
80846312
+
GWHAAZE00000001
exon
80849512
80849545
+
GWHAAZE00000001
exon
80850628
80850683
+
GWHAAZE00000001
exon
80850777
80850917
+
GWHAAZE00000001
exon
80851480
80851628
+
GWHAAZE00000001
exon
80851710
80851799
+
GWHAAZE00000001
exon
80851913
80851979
+
GWHAAZE00000001
exon
80852055
80852118
+
GWHAAZE00000001
exon
80852208
80852322
+
GWHAAZE00000001
exon
80852394
80852560
+
GWHAAZE00000001
exon
80852671
80852781
+
GWHAAZE00000001
exon
80852865
80852926
+
GWHAAZE00000001
exon
80853231
80853283
+
GWHAAZE00000001
exon
80853381
80853456
+
GWHAAZE00000001
exon
80854139
80854267
+
GWHAAZE00000001
exon
80854866
80854931
+
GWHAAZE00000001
CDS
80846025
80846031
+
GWHAAZE00000001
CDS
80846197
80846312
+
GWHAAZE00000001
CDS
80849512
80849545
+
GWHAAZE00000001
CDS
80850628
80850683
+
GWHAAZE00000001
CDS
80850777
80850917
+
GWHAAZE00000001
CDS
80851480
80851628
+
GWHAAZE00000001
CDS
80851710
80851799
+
GWHAAZE00000001
CDS
80851913
80851979
+
GWHAAZE00000001
CDS
80852055
80852118
+
GWHAAZE00000001
CDS
80852208
80852322
+
GWHAAZE00000001
CDS
80852394
80852560
+
GWHAAZE00000001
CDS
80852671
80852781
+
GWHAAZE00000001
CDS
80852865
80852926
+
GWHAAZE00000001
CDS
80853231
80853283
+
GWHAAZE00000001
CDS
80853381
80853456
+
GWHAAZE00000001
CDS
80854139
80854267
+
GWHAAZE00000001
CDS
80854866
80854931
+
Transcript Sequence
>GWHTAAZE002543 ATGACAGGCCAAAAAGAAGAAGCAAAAATTGGGAGGAGGAGAGGTAGGGCAGCGGTGGTGGTTCTCGGTGACATCGGCCGCAGCCCCCGTATGCAATACCATGCCCTTTCCCTAGCCCGTCAGGCATGTCTAGAGGTGGATATTGTTGCATATGGAGGTTCAGAGCCCCATTCTGCAGTATCAGAGCACCAATCTATTCATATTCATAAGATGACACAGTGGCCGACAGTCCCTCGAAGCTTGCCTAAGATACTTCGCCCCTTTATGCTTTTGATCAAGCCATTGATTCAGTTTCTTATGCTTCTCTGGTTTCTCTTTTTTAAAATACCAACTCCAGATGTTTTCATTGTGCAGAATCCACCTTCTGTTCCTACTTTAGTGGCTGTAAAATGGGTGAGCTGGCTGAGGCGTTCTGCATTCATTATCGACTGGCATAATTTCGGATATACCCTGTTGGCATTGTCTCTTGGAAGAAGTAGTCGTTTCGTTGCATTATATCGTTGGTTTGAGAAACATTATGGGCAGATGGCAAATGGCTCTTTATGTGTGACGAGGGCGATGCAACACGAATTGGCTCAAAACTGGGGAATTAAAGCCACAGTTCTGTACGATCAACCTCCCGAGTTTTTTCATCCTGCTTTTCTCCAGGAGAAGCACAAGTTGTTCTATAGGATTAACAAACATCTGAGTCAGCCTTATGGTCTTCAAGACTGCATCAGCATCGGAATGGTGGGTCCGGACAGTCGTGATCCACACGCAACTTTATTTACAACCCAAGTTGGCGATGATATATTCTTGAAGCAAAATAGGCCAGCCCTCATTGTCAGCAGTACTAGCTGGACGCCTGATGAGGATTTCGGTATTCTTCTGGAAGCAGCACTTATGTATGATAGACGTGTTGCTGCGTTACTAAACGAGGATGACTCAACTGGGGAAGATGTTATTTGGAAAGAAATTTGTGAGGGGAAGCAATTCTTGTACCCAAGGTTACTATTCATTATTACAGGTAAAGGCCCTGAAAAAGAAAAATACGAAGAGAAAATAAGGAAATTGAACCTCAAGCGTGTAGCATTTCGTACTATGTGGCTAGAGCCCGAGGATTACCCATTGCTTCTTGGCTCCGCGGATTTGGGTGTTTGTCTGCATACTTCCTCATCGGGGCTGGATCTTCCAATGAAGGTTGTAGATATGTTTGGTTGTGGGCTGCCTGTTTGTGCCGTTTCCTATTCATGCATCAAGGAGCTTGTAAAAGTTGAAGAAAATGGTTTGCTCTTCAATTCATCCTCGGAGCTTGCTGATGAACTTATGATGCTCTTTAAGGGTTTTCCAAATGGATGCGGGGCTTTGAAGTCATTGAGGGACGGTGTACTGCAAATGGGCTCATCTGCAAGGTGGGCAACTGAATGGGAAGGGAATGCCAAGCCTTTAATTTCCGAGGATGAGAGTAGTACCTTTGTAAACGGACTTTATGACCTAAAGACAACGTTTTCTTTTACAGCTTAG
Network for GWHGAAZE002539
Network category
Network
Top300 PCC genelist
Coexpression Positive
Network
Top300 PCC genelist
Coexpression Negative
Network
Top300 PCC genelist
Functional Module
Module ID
Function Annotation
Protein Structure
Pfam accession
Pfam name
Alignment start
Alignment end
E-value
PF13579.7
Glyco_trans_4_4
37
199
8.00E-09
PF13692.7
Glyco_trans_1_4
329
439
1.80E-09
Protein Sequence
>GWHPAAZE002541 MTGQKEEAKIGRRRGRAAVVVLGDIGRSPRMQYHALSLARQACLEVDIVAYGGSEPHSAVSEHQSIHIHKMTQWPTVPRSLPKILRPFMLLIKPLIQFLMLLWFLFFKIPTPDVFIVQNPPSVPTLVAVKWVSWLRRSAFIIDWHNFGYTLLALSLGRSSRFVALYRWFEKHYGQMANGSLCVTRAMQHELAQNWGIKATVLYDQPPEFFHPAFLQEKHKLFYRINKHLSQPYGLQDCISIGMVGPDSRDPHATLFTTQVGDDIFLKQNRPALIVSSTSWTPDEDFGILLEAALMYDRRVAALLNEDDSTGEDVIWKEICEGKQFLYPRLLFIITGKGPEKEKYEEKIRKLNLKRVAFRTMWLEPEDYPLLLGSADLGVCLHTSSSGLDLPMKVVDMFGCGLPVCAVSYSCIKELVKVEENGLLFNSSSELADELMMLFKGFPNGCGALKSLRDGVLQMGSSARWATEWEGNAKPLISEDESSTFVNGLYDLKTTFSFTA
Gene family
Gene family
subfamily
--
--
KEGG pathway
KO
Enzyme
pathway
mapID
K03842
ALG1
Metabolic pathways
map01100
N-Glycan biosynthesis
map00510
Various types of N-glycan biosynthesis
map00513
Gene Ontology
GO term
Ontology
Name
Expression pattern
Expression pattern detail
SRP
Sample
Description
TPM
SRP075780
SRR3591705
youngest leaf
16.580
SRR3591706
second leaf
13.258
SRR3591707
mature leaf
12.096
SRR3591708
Shoot apex
18.629
SRR3591709
Stem
16.911
SRR3591710
White floral bud
11.780
SRR3591711
White flower
12.271
SRR3591712
Green floral bud
13.448
SRR3591713
Yellow flower
10.420
SRP173429
SRR8316895
Juvenile bud stage
13.257
SRR8316896
Juvenile bud stage
19.241
SRR8316897
Juvenile bud stage
9.351
SRR8316894
Third green stage
8.266
SRR8316900
Third green stage
18.505
SRR8316901
Third green stage
20.213
SRR8316898
Complete white stage
8.288
SRR8316899
Complete white stage
22.337
SRR8316903
Complete white stage
13.732
SRR8316902
Silver flowering stage
6.799
SRR8316904
Silver flowering stage
9.882
SRR8316905
Silver flowering stage
4.372
SRR8316906
Gold flowering stage
13.905
SRR8316907
Gold flowering stage
13.094
SRR8316908
Gold flowering stage
13.762
SRP132670
SRR6706286
Control
21.991
SRR6706287
Light intensity 50%
20.517
SRR6706288
Light intensity 20%
23.745
CNP0000432
CNS0095592
Slightly white alabastrum(diploid) 1
21.232
CNS0095593
Slightly white alabastrum(diploid) 2
17.628
CNS0095594
Slightly white alabastrum(diploid) 3
17.632
CNS0095595
Whole white alabastrum(diploid) 2
16.291
CNS0095596
Whole white alabastrum(diploid) 3
15.946
CNS0095597
Whole white alabastrum(diploid) 4
13.989
CNS0095598
Silvery flower (diploied) 1
21.863
CNS0095599
Silvery flower (diploied) 2
20.058
CNS0095600
Silvery flower (diploied) 3
16.015
CNS0095601
Golden flower (diploid) 1
16.733
CNS0095602
Golden flower (diploid) 2
16.449
CNS0095603
Golden flower (diploid) 3
16.412
CNS0095604
Slightly white alabastrum(tetraploid) 1
26.905
CNS0095605
Slightly white alabastrum(tetraploid) 2
25.893
CNS0095606
Slightly white alabastrum(tetraploid) 3
35.662
CNS0095607
Whole white alabastrum(tetraploid) 1
19.762
CNS0095608
Whole white alabastrum(tetraploid) 2
17.082
CNS0095609
Whole white alabastrum(tetraploid) 3
25.019
CNS0095610
Silvery flower (tetraploid) 1
29.869
CNS0095611
Silvery flower (tetraploid) 2
23.158
CNS0095612
Silvery flower (tetraploid) 3
22.440
CNS0095613
Golden flower (tetraploid) 1
20.125
CNS0095614
Golden flower (tetraploid) 2
26.988
CNS0095615
Golden flower (tetraploid) 3
14.235
CRA001975
CRR073297
Stem 1
20.957
CRR073298
Stem 2
18.139
CRR073299
Stem 3
17.769
CRR073300
Leaf 1
20.510
CRR073301
Leaf 2
22.169
CRR073302
Leaf 3
14.602
CRR073303
Juvenile bud 1
17.495
CRR073304
Juvenile bud 2
9.679
CRR073305
Juvenile bud 3
18.786
CRR073306
Third green 1
4.677
CRR073307
Third green 2
5.072
CRR073308
Third green 3
5.303
CRR073309
Second white 1
4.732
CRR073310
Second white 2
3.252
CRR073311
Second white 3
3.241
CRR073312
Silver flowering 1
2.109
CRR073313
Silver flowering 2
3.107
CRR073314
Silver flowering 3
2.694
CRR073315
Gold flowering 1
7.318
CRR073316
Gold flowering 2
7.209
CRR073317
Gold flowering 3
7.581
CRR073318
Tawny withering 1
15.845
CRR073319
Tawny withering 2
16.384
CRR073320
Tawny withering 3
15.007