Detail information of GWHGAAZE002539


Functional Annotation

DatabaseOrthologsE valueAnnotation
NrXP_009344332.10PREDICTED: chitobiosyldiphosphodolichol beta-mannosyltransferase-like isoform X1 [Pyrus x bretschneideri]
trEMBLtr|A0A068UC85|A0A068UC85_COFCA0Coffea canephora DH200=94 genomic scaffold, scaffold_19 {ECO:0000313|EMBL:CDP06106.1}
TAIR10AT1G16570.13E-179UDP-Glycosyltransferase superfamily protein

Location And Transcript Sequence (JBrowse)

ScaffoldTypeStartEndStrand
GWHAAZE00000001gene8084602580854931+
GWHAAZE00000001mRNA8084602580854931+
GWHAAZE00000001exon8084602580846031+
GWHAAZE00000001exon8084619780846312+
GWHAAZE00000001exon8084951280849545+
GWHAAZE00000001exon8085062880850683+
GWHAAZE00000001exon8085077780850917+
GWHAAZE00000001exon8085148080851628+
GWHAAZE00000001exon8085171080851799+
GWHAAZE00000001exon8085191380851979+
GWHAAZE00000001exon8085205580852118+
GWHAAZE00000001exon8085220880852322+
GWHAAZE00000001exon8085239480852560+
GWHAAZE00000001exon8085267180852781+
GWHAAZE00000001exon8085286580852926+
GWHAAZE00000001exon8085323180853283+
GWHAAZE00000001exon8085338180853456+
GWHAAZE00000001exon8085413980854267+
GWHAAZE00000001exon8085486680854931+
GWHAAZE00000001CDS8084602580846031+
GWHAAZE00000001CDS8084619780846312+
GWHAAZE00000001CDS8084951280849545+
GWHAAZE00000001CDS8085062880850683+
GWHAAZE00000001CDS8085077780850917+
GWHAAZE00000001CDS8085148080851628+
GWHAAZE00000001CDS8085171080851799+
GWHAAZE00000001CDS8085191380851979+
GWHAAZE00000001CDS8085205580852118+
GWHAAZE00000001CDS8085220880852322+
GWHAAZE00000001CDS8085239480852560+
GWHAAZE00000001CDS8085267180852781+
GWHAAZE00000001CDS8085286580852926+
GWHAAZE00000001CDS8085323180853283+
GWHAAZE00000001CDS8085338180853456+
GWHAAZE00000001CDS8085413980854267+
GWHAAZE00000001CDS8085486680854931+
Transcript Sequence

Network for GWHGAAZE002539

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist


Functional Module

Module IDFunction Annotation


Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF13579.7Glyco_trans_4_4371998.00E-09
PF13692.7Glyco_trans_1_43294391.80E-09
Protein Sequence

Gene family

Gene familysubfamily
----

KEGG pathway

KO Enzyme pathway mapID
K03842ALG1 Metabolic pathways map01100
N-Glycan biosynthesismap00510
Various types of N-glycan biosynthesismap00513

Gene Ontology

GO term OntologyName

Expression pattern


Expression pattern detail

SRPSampleDescriptionTPM
SRP075780SRR3591705youngest leaf16.580
SRR3591706second leaf13.258
SRR3591707mature leaf12.096
SRR3591708Shoot apex18.629
SRR3591709Stem16.911
SRR3591710White floral bud11.780
SRR3591711White flower12.271
SRR3591712Green floral bud13.448
SRR3591713Yellow flower10.420
SRP173429 SRR8316895Juvenile bud stage 13.257
SRR8316896Juvenile bud stage 19.241
SRR8316897Juvenile bud stage 9.351
SRR8316894Third green stage 8.266
SRR8316900Third green stage 18.505
SRR8316901Third green stage 20.213
SRR8316898Complete white stage 8.288
SRR8316899Complete white stage 22.337
SRR8316903Complete white stage 13.732
SRR8316902Silver flowering stage6.799
SRR8316904Silver flowering stage9.882
SRR8316905Silver flowering stage4.372
SRR8316906Gold flowering stage 13.905
SRR8316907Gold flowering stage 13.094
SRR8316908Gold flowering stage 13.762
SRP132670SRR6706286Control21.991
SRR6706287Light intensity 50%20.517
SRR6706288Light intensity 20%23.745
CNP0000432CNS0095592Slightly white alabastrum(diploid) 121.232
CNS0095593Slightly white alabastrum(diploid) 217.628
CNS0095594Slightly white alabastrum(diploid) 317.632
CNS0095595Whole white alabastrum(diploid) 216.291
CNS0095596Whole white alabastrum(diploid) 315.946
CNS0095597Whole white alabastrum(diploid) 413.989
CNS0095598Silvery flower (diploied) 121.863
CNS0095599Silvery flower (diploied) 220.058
CNS0095600Silvery flower (diploied) 316.015
CNS0095601Golden flower (diploid) 116.733
CNS0095602Golden flower (diploid) 216.449
CNS0095603Golden flower (diploid) 316.412
CNS0095604Slightly white alabastrum(tetraploid) 126.905
CNS0095605Slightly white alabastrum(tetraploid) 225.893
CNS0095606Slightly white alabastrum(tetraploid) 335.662
CNS0095607Whole white alabastrum(tetraploid) 119.762
CNS0095608Whole white alabastrum(tetraploid) 217.082
CNS0095609Whole white alabastrum(tetraploid) 325.019
CNS0095610Silvery flower (tetraploid) 129.869
CNS0095611Silvery flower (tetraploid) 223.158
CNS0095612Silvery flower (tetraploid) 322.440
CNS0095613Golden flower (tetraploid) 120.125
CNS0095614Golden flower (tetraploid) 226.988
CNS0095615Golden flower (tetraploid) 314.235
CRA001975CRR073297Stem 120.957
CRR073298Stem 218.139
CRR073299Stem 317.769
CRR073300Leaf 120.510
CRR073301Leaf 222.169
CRR073302Leaf 314.602
CRR073303Juvenile bud 117.495
CRR073304Juvenile bud 29.679
CRR073305Juvenile bud 318.786
CRR073306Third green 14.677
CRR073307Third green 25.072
CRR073308Third green 35.303
CRR073309Second white 14.732
CRR073310Second white 23.252
CRR073311Second white 33.241
CRR073312Silver flowering 12.109
CRR073313Silver flowering 23.107
CRR073314Silver flowering 32.694
CRR073315Gold flowering 17.318
CRR073316Gold flowering 27.209
CRR073317Gold flowering 37.581
CRR073318Tawny withering 115.845
CRR073319Tawny withering 216.384
CRR073320Tawny withering 315.007