Gene detail

Detail information of GWHGAAZE002567

Functional Annotation

Database	Orthologs	E value	Annotation
Nr	XP_011098109.1	1.0269E-79	PREDICTED: 2-oxoglutarate-dependent dioxygenase DAO-like [Sesamum indicum]
COG	NP_107308.1	0.000009	hypothetical protein mlr6892
Swissprot	tr\|Q7XKU5\|DAO_ORYSJ	2E-50	2-oxoglutarate-dependent dioxygenase DAO
trEMBL	tr\|A5AW66\|A5AW66_VITVI	6E-78	Putative uncharacterized protein {ECO:0000313\|EMBL:CAN69444.1}
TAIR10	AT1G14130.1	2E-55	2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein

Location And Transcript Sequence (JBrowse)

Scaffold	Type	Start	End	Strand
GWHAAZE00000001	gene	81836073	81837649	-
GWHAAZE00000001	mRNA	81836073	81837649	-
GWHAAZE00000001	exon	81836073	81836177	-
GWHAAZE00000001	exon	81836513	81836745	-
GWHAAZE00000001	exon	81837304	81837649	-
GWHAAZE00000001	CDS	81837304	81837649	-
GWHAAZE00000001	CDS	81836513	81836745	-
GWHAAZE00000001	CDS	81836073	81836177	-

Transcript Sequence
>GWHTAAZE002571 ATGGGATGCAGTATTCCCGTAATAGATTTGCAAGATTTTCCATCACAGTCCCAAAAATTGGTAGAGGCTTGTGAGGAATGGGGATGTTTTAGGCTCATCAATCATGGGGTTCCACTTGCTCTGATGTCGGAGATGAAGAAAACAGTGAGAGCTCTTCTCGACCTTCCGATTGAGATCAAACGGAGGAATACGAGCGAACATTTTAGTGGGGATGTACAGCCTCACATCATCAGTCCTTTGTACGAGAGCTTGGGTCTTCATTATGTTGGCTCCCCTGATGCTGTTCATGCCTTTTGTAATCAGCTCAATACTTCTCTCCAACAAAGGTTCGATCTCTCTCTCTCAGGCGATTTGTTTAAGGGATGGCCTTGTCAATTCAGAATTAACAAGTACAACTTCAAGCCTGAAACTATAGGGTTGCCCGGGGTCCATAACCACACGGATGCAGGTTTTCTTACCATATTACAGGATGATGAAAATGTTGGAGGCCTCGAGGTTATGGATGATGAGTCCGGTAAATTTACAGCAGTTGATCCATGGCCGACTACCCTCATTGTCAATCTTGGTGACATAGCTAAGAATAGGCAGGAGGAATTTGGCTCTCTATCTACCGAGAGAGAGGAGAATTGGCAGCTCTCTCTCTACCGAGAGAGATGGAATTTGGATTTGATTTCCTCCATTTGA

Network for GWHGAAZE002567

Network category	Network	Top300 PCC genelist
Coexpression Positive	Network	Top300 PCC genelist
Coexpression Negative	Network	Top300 PCC genelist

Functional Module

Module ID	Function Annotation

Protein Structure

Pfam accession	Pfam name	Alignment start	Alignment end	E-value
PF14226.7	DIOX_N	5	64	1.30E-13
PF03171.21	2OG-FeII_Oxy	125	191	1.70E-09

Protein Sequence

Gene family

Gene family	subfamily
--	--

KEGG pathway

KO	Enzyme	pathway	mapID
K23947	DAO	Tryptophan metabolism	map00380

Gene Ontology

GO term	Ontology	Name
GO:0055114	biological_process	oxidation-reduction process
GO:0016491	molecular_function	oxidoreductase activity

Expression pattern

Expression pattern detail

SRP	Sample	Description	TPM
SRP075780	SRR3591705	youngest leaf	0.000
	SRR3591706	second leaf	0.000
	SRR3591707	mature leaf	0.000
	SRR3591708	Shoot apex	0.000
	SRR3591709	Stem	0.000
	SRR3591710	White floral bud	0.285
	SRR3591711	White flower	5.940
	SRR3591712	Green floral bud	0.135
	SRR3591713	Yellow flower	6.626
SRP173429	SRR8316895	Juvenile bud stage	0.000
	SRR8316896	Juvenile bud stage	0.113
	SRR8316897	Juvenile bud stage	0.271
	SRR8316894	Third green stage	0.000
	SRR8316900	Third green stage	0.400
	SRR8316901	Third green stage	0.526
	SRR8316898	Complete white stage	2.265
	SRR8316899	Complete white stage	1.109
	SRR8316903	Complete white stage	2.479
	SRR8316902	Silver flowering stage	0.657
	SRR8316904	Silver flowering stage	1.229
	SRR8316905	Silver flowering stage	0.552
	SRR8316906	Gold flowering stage	2.981
	SRR8316907	Gold flowering stage	3.722
	SRR8316908	Gold flowering stage	3.582
SRP132670	SRR6706286	Control	1.373
	SRR6706287	Light intensity 50%	1.178
	SRR6706288	Light intensity 20%	1.236
CNP0000432	CNS0095592	Slightly white alabastrum(diploid) 1	0.000
	CNS0095593	Slightly white alabastrum(diploid) 2	0.000
	CNS0095594	Slightly white alabastrum(diploid) 3	0.006
	CNS0095595	Whole white alabastrum(diploid) 2	0.095
	CNS0095596	Whole white alabastrum(diploid) 3	0.053
	CNS0095597	Whole white alabastrum(diploid) 4	0.162
	CNS0095598	Silvery flower (diploied) 1	0.659
	CNS0095599	Silvery flower (diploied) 2	1.141
	CNS0095600	Silvery flower (diploied) 3	9.687
	CNS0095601	Golden flower (diploid) 1	1.052
	CNS0095602	Golden flower (diploid) 2	9.002
	CNS0095603	Golden flower (diploid) 3	7.635
	CNS0095604	Slightly white alabastrum(tetraploid) 1	0.012
	CNS0095605	Slightly white alabastrum(tetraploid) 2	0.093
	CNS0095606	Slightly white alabastrum(tetraploid) 3	0.895
	CNS0095607	Whole white alabastrum(tetraploid) 1	0.097
	CNS0095608	Whole white alabastrum(tetraploid) 2	0.000
	CNS0095609	Whole white alabastrum(tetraploid) 3	0.448
	CNS0095610	Silvery flower (tetraploid) 1	48.113
	CNS0095611	Silvery flower (tetraploid) 2	64.783
	CNS0095612	Silvery flower (tetraploid) 3	84.403
	CNS0095613	Golden flower (tetraploid) 1	63.172
	CNS0095614	Golden flower (tetraploid) 2	118.601
	CNS0095615	Golden flower (tetraploid) 3	10.160
CRA001975	CRR073297	Stem 1	0.299
	CRR073298	Stem 2	0.327
	CRR073299	Stem 3	0.000
	CRR073300	Leaf 1	0.583
	CRR073301	Leaf 2	0.661
	CRR073302	Leaf 3	0.987
	CRR073303	Juvenile bud 1	0.228
	CRR073304	Juvenile bud 2	1.584
	CRR073305	Juvenile bud 3	0.205
	CRR073306	Third green 1	6.983
	CRR073307	Third green 2	3.056
	CRR073308	Third green 3	6.113
	CRR073309	Second white 1	2.137
	CRR073310	Second white 2	16.968
	CRR073311	Second white 3	14.000
	CRR073312	Silver flowering 1	1.689
	CRR073313	Silver flowering 2	1.560
	CRR073314	Silver flowering 3	2.562
	CRR073315	Gold flowering 1	0.000
	CRR073316	Gold flowering 2	0.000
	CRR073317	Gold flowering 3	0.000
	CRR073318	Tawny withering 1	0.000
	CRR073319	Tawny withering 2	0.000
	CRR073320	Tawny withering 3	0.000