Detail information of GWHGAAZE002611


Functional Annotation

DatabaseOrthologsE valueAnnotation
NrCBI20168.30unnamed protein product [Vitis vinifera]
Swissprottr|O65355|GGH2_ARATH6E-179Gamma-glutamyl hydrolase 2 (Precursor)
trEMBLtr|F6H1W5|F6H1W5_VITVI0Putative uncharacterized protein {ECO:0000313|EMBL:CCB46229.1}
TAIR10AT1G78680.12E-143gamma-glutamyl hydrolase 2

Location And Transcript Sequence (JBrowse)

ScaffoldTypeStartEndStrand
GWHAAZE00000001gene8266381682670116-
GWHAAZE00000001mRNA8266381682670116-
GWHAAZE00000001exon8266970382670116-
GWHAAZE00000001exon8266888082668966-
GWHAAZE00000001exon8266804982668138-
GWHAAZE00000001exon8266732582667419-
GWHAAZE00000001exon8266511482665174-
GWHAAZE00000001exon8266479182664880-
GWHAAZE00000001exon8266459682664658-
GWHAAZE00000001exon8266433482664422-
GWHAAZE00000001exon8266411882664210-
GWHAAZE00000001exon8266381682663855-
GWHAAZE00000001CDS8266970382670116-
GWHAAZE00000001CDS8266888082668966-
GWHAAZE00000001CDS8266804982668138-
GWHAAZE00000001CDS8266732582667419-
GWHAAZE00000001CDS8266511482665174-
GWHAAZE00000001CDS8266479182664880-
GWHAAZE00000001CDS8266459682664658-
GWHAAZE00000001CDS8266433482664422-
GWHAAZE00000001CDS8266411882664210-
GWHAAZE00000001CDS8266381682663855-
Transcript Sequence

Network for GWHGAAZE002611

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist


Functional Module

Module IDFunction Annotation


Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF07722.14Peptidase_C26843006.40E-18
Protein Sequence

Gene family

Gene familysubfamily
----

KEGG pathway

KO Enzyme pathway mapID
K01307GGH Folate biosynthesis map00790

Gene Ontology

GO term OntologyName
GO:0016787molecular_functionhydrolase activity
GO:0008242molecular_functionomega peptidase activity

Expression pattern


Expression pattern detail

SRPSampleDescriptionTPM
SRP075780SRR3591705youngest leaf104.141
SRR3591706second leaf63.468
SRR3591707mature leaf58.017
SRR3591708Shoot apex85.368
SRR3591709Stem172.956
SRR3591710White floral bud86.467
SRR3591711White flower77.432
SRR3591712Green floral bud87.106
SRR3591713Yellow flower74.576
SRP173429 SRR8316895Juvenile bud stage 57.341
SRR8316896Juvenile bud stage 73.578
SRR8316897Juvenile bud stage 32.181
SRR8316894Third green stage 31.230
SRR8316900Third green stage 90.763
SRR8316901Third green stage 90.732
SRR8316898Complete white stage 51.514
SRR8316899Complete white stage 120.621
SRR8316903Complete white stage 102.865
SRR8316902Silver flowering stage53.984
SRR8316904Silver flowering stage71.108
SRR8316905Silver flowering stage37.357
SRR8316906Gold flowering stage 102.854
SRR8316907Gold flowering stage 99.233
SRR8316908Gold flowering stage 88.179
SRP132670SRR6706286Control44.084
SRR6706287Light intensity 50%44.461
SRR6706288Light intensity 20%45.547
CNP0000432CNS0095592Slightly white alabastrum(diploid) 167.471
CNS0095593Slightly white alabastrum(diploid) 261.201
CNS0095594Slightly white alabastrum(diploid) 361.528
CNS0095595Whole white alabastrum(diploid) 263.508
CNS0095596Whole white alabastrum(diploid) 356.048
CNS0095597Whole white alabastrum(diploid) 462.752
CNS0095598Silvery flower (diploied) 175.254
CNS0095599Silvery flower (diploied) 270.319
CNS0095600Silvery flower (diploied) 3145.947
CNS0095601Golden flower (diploid) 178.446
CNS0095602Golden flower (diploid) 2152.694
CNS0095603Golden flower (diploid) 3143.160
CNS0095604Slightly white alabastrum(tetraploid) 166.802
CNS0095605Slightly white alabastrum(tetraploid) 255.226
CNS0095606Slightly white alabastrum(tetraploid) 378.844
CNS0095607Whole white alabastrum(tetraploid) 149.800
CNS0095608Whole white alabastrum(tetraploid) 246.285
CNS0095609Whole white alabastrum(tetraploid) 365.213
CNS0095610Silvery flower (tetraploid) 1108.602
CNS0095611Silvery flower (tetraploid) 2128.631
CNS0095612Silvery flower (tetraploid) 3129.234
CNS0095613Golden flower (tetraploid) 170.247
CNS0095614Golden flower (tetraploid) 294.328
CNS0095615Golden flower (tetraploid) 3120.099
CRA001975CRR073297Stem 184.025
CRR073298Stem 283.492
CRR073299Stem 385.935
CRR073300Leaf 185.596
CRR073301Leaf 284.614
CRR073302Leaf 383.140
CRR073303Juvenile bud 184.933
CRR073304Juvenile bud 299.024
CRR073305Juvenile bud 393.127
CRR073306Third green 177.943
CRR073307Third green 272.526
CRR073308Third green 370.785
CRR073309Second white 168.139
CRR073310Second white 263.404
CRR073311Second white 354.594
CRR073312Silver flowering 146.429
CRR073313Silver flowering 240.762
CRR073314Silver flowering 347.219
CRR073315Gold flowering 136.118
CRR073316Gold flowering 243.161
CRR073317Gold flowering 334.677
CRR073318Tawny withering 176.535
CRR073319Tawny withering 261.741
CRR073320Tawny withering 374.740