Detail information of GWHGAAZE002612


Functional Annotation

DatabaseOrthologsE valueAnnotation
NrXP_010644097.16.3024E-163PREDICTED: BES1/BZR1 homolog protein 4 [Vitis vinifera]
Swissprottr|Q9ZV88|BEH4_ARATH1E-135BES1/BZR1 homolog protein 4
trEMBLtr|A0A067DLE1|A0A067DLE1_CITSI4E-160Uncharacterized protein {ECO:0000313|EMBL:KDO43794.1}
TAIR10AT1G78700.13E-94BES1/BZR1 homolog 4

Location And Transcript Sequence (JBrowse)

ScaffoldTypeStartEndStrand
GWHAAZE00000001gene8270542982709342+
GWHAAZE00000001mRNA8270542982709342+
GWHAAZE00000001exon8270542982705644+
GWHAAZE00000001exon8270791982708670+
GWHAAZE00000001exon8270924982709342+
GWHAAZE00000001CDS8270542982705644+
GWHAAZE00000001CDS8270791982708670+
GWHAAZE00000001CDS8270924982709342+
Transcript Sequence

Network for GWHGAAZE002612

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist


Functional Module

Module IDFunction Annotation


Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF05687.14BES1_N41391.30E-66
Protein Sequence

Gene family

Gene familysubfamily
Transcription Factors FamilyBES1

KEGG pathway

KO Enzyme pathway mapID
--------

Gene Ontology

GO term OntologyName

Expression pattern

Created with Highcharts 5.0.4Chart context menuExpression pattern for GWHGAAZE002612.youngest leafsecond leafmature leafShoot apexStemWhite floral budWhite flowerGreen floral budYellow flowerJuvenile bud stage 1Juvenile bud stage 2Juvenile bud stage 3Third green stage 1Third green stage 2Third green stage 3Complete white stage 1Complete white stage 2Complete white stage 3Silver flowering stage 1Silver flowering stage 2Silver flowering stage 3Gold flowering stage 1Gold flowering stage 2Gold flowering stage 3Control 1Light intensity 50%Light intensity 20%Slightly white alabastrum(diploid) 1Slightly white alabastrum(diploid) 2Slightly white alabastrum(diploid) 3Whole white alabastrum(diploid) 1Whole white alabastrum(diploid) 2Whole white alabastrum(diploid) 3Silvery flower (diploied) 1Silvery flower (diploied) 2Silvery flower (diploied) 3Golden flower (diploid) 1Golden flower (diploid) 2Golden flower (diploid) 3Slightly white alabastrum(tetraploid) 1Slightly white alabastrum(tetraploid) 2Slightly white alabastrum(tetraploid) 3Whole white alabastrum(tetraploid) 1Whole white alabastrum(tetraploid) 2Whole white alabastrum(tetraploid) 3Silvery flower (tetraploid) 1Silvery flower (tetraploid) 2Silvery flower (tetraploid) 3Golden flower (tetraploid) 1Golden flower (tetraploid) 2Golden flower (tetraploid) 3Stem 1Stem 2Stem 3Leaf 1Leaf 2Leaf 3Juvenile bud 1Juvenile bud 2Juvenile bud 3Third green 1Third green 2Third green 3Second white 1Second white 2Second white 3Silver flowering 1Silver flowering 2Silver flowering 3Gold flowering 1Gold flowering 2Gold flowering 3Tawny withering 1Tawny withering 2Tawny withering 3051015202530354045505560657075Highcharts.com

Expression pattern detail

SRPSampleDescriptionTPM
SRP075780SRR3591705youngest leaf29.488
SRR3591706second leaf5.298
SRR3591707mature leaf1.072
SRR3591708Shoot apex66.603
SRR3591709Stem40.200
SRR3591710White floral bud16.833
SRR3591711White flower12.610
SRR3591712Green floral bud19.866
SRR3591713Yellow flower2.214
SRP173429 SRR8316895Juvenile bud stage 22.696
SRR8316896Juvenile bud stage 20.886
SRR8316897Juvenile bud stage 9.070
SRR8316894Third green stage 7.458
SRR8316900Third green stage 14.027
SRR8316901Third green stage 14.119
SRR8316898Complete white stage 1.634
SRR8316899Complete white stage 19.174
SRR8316903Complete white stage 5.365
SRR8316902Silver flowering stage2.207
SRR8316904Silver flowering stage4.209
SRR8316905Silver flowering stage1.834
SRR8316906Gold flowering stage 3.688
SRR8316907Gold flowering stage 5.086
SRR8316908Gold flowering stage 6.674
SRP132670SRR6706286Control14.429
SRR6706287Light intensity 50%13.332
SRR6706288Light intensity 20%12.825
CNP0000432CNS0095592Slightly white alabastrum(diploid) 128.246
CNS0095593Slightly white alabastrum(diploid) 230.054
CNS0095594Slightly white alabastrum(diploid) 319.895
CNS0095595Whole white alabastrum(diploid) 219.075
CNS0095596Whole white alabastrum(diploid) 315.083
CNS0095597Whole white alabastrum(diploid) 48.971
CNS0095598Silvery flower (diploied) 117.795
CNS0095599Silvery flower (diploied) 214.895
CNS0095600Silvery flower (diploied) 310.804
CNS0095601Golden flower (diploid) 110.492
CNS0095602Golden flower (diploid) 28.801
CNS0095603Golden flower (diploid) 39.925
CNS0095604Slightly white alabastrum(tetraploid) 122.984
CNS0095605Slightly white alabastrum(tetraploid) 218.825
CNS0095606Slightly white alabastrum(tetraploid) 339.761
CNS0095607Whole white alabastrum(tetraploid) 111.441
CNS0095608Whole white alabastrum(tetraploid) 24.867
CNS0095609Whole white alabastrum(tetraploid) 310.270
CNS0095610Silvery flower (tetraploid) 16.632
CNS0095611Silvery flower (tetraploid) 28.311
CNS0095612Silvery flower (tetraploid) 36.739
CNS0095613Golden flower (tetraploid) 10.484
CNS0095614Golden flower (tetraploid) 25.318
CNS0095615Golden flower (tetraploid) 32.922
CRA001975CRR073297Stem 136.535
CRR073298Stem 232.194
CRR073299Stem 367.674
CRR073300Leaf 125.083
CRR073301Leaf 222.644
CRR073302Leaf 320.121
CRR073303Juvenile bud 123.366
CRR073304Juvenile bud 213.151
CRR073305Juvenile bud 329.026
CRR073306Third green 16.326
CRR073307Third green 221.798
CRR073308Third green 312.709
CRR073309Second white 11.642
CRR073310Second white 21.467
CRR073311Second white 31.501
CRR073312Silver flowering 10.364
CRR073313Silver flowering 20.586
CRR073314Silver flowering 30.307
CRR073315Gold flowering 19.642
CRR073316Gold flowering 29.084
CRR073317Gold flowering 311.436
CRR073318Tawny withering 150.138
CRR073319Tawny withering 237.451
CRR073320Tawny withering 347.387