Detail information of GWHGAAZE002649


Functional Annotation

DatabaseOrthologsE valueAnnotation
NrXP_011082737.12.3522E-148PREDICTED: transcription factor TCP4-like [Sesamum indicum]
Swissprottr|Q8LPR5|TCP4_ARATH5E-107Transcription factor TCP4
trEMBLtr|M4PM76|M4PM76_9SOLA1E-146TCP trancription factor {ECO:0000313|EMBL:AGH06161.1}
TAIR10AT3G15030.38E-82TCP family transcription factor 4

Location And Transcript Sequence (JBrowse)

ScaffoldTypeStartEndStrand
GWHAAZE00000001gene8343668783437868+
GWHAAZE00000001mRNA8343668783437868+
GWHAAZE00000001exon8343668783437058+
GWHAAZE00000001exon8343710183437868+
GWHAAZE00000001CDS8343668783437058+
GWHAAZE00000001CDS8343710183437868+
Transcript Sequence

Network for GWHGAAZE002649

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist


Functional Module

Module IDFunction Annotation


Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF03634.14TCP391763.00E-30
Protein Sequence

Gene family

Gene familysubfamily
Transcription Factors FamilyTCP

KEGG pathway

KO Enzyme pathway mapID
--------

Gene Ontology

GO term OntologyName

Expression pattern


Expression pattern detail

SRPSampleDescriptionTPM
SRP075780SRR3591705youngest leaf3.603
SRR3591706second leaf173.179
SRR3591707mature leaf93.468
SRR3591708Shoot apex170.412
SRR3591709Stem7.454
SRR3591710White floral bud10.693
SRR3591711White flower8.377
SRR3591712Green floral bud58.679
SRR3591713Yellow flower3.136
SRP173429 SRR8316895Juvenile bud stage 33.503
SRR8316896Juvenile bud stage 32.153
SRR8316897Juvenile bud stage 11.528
SRR8316894Third green stage 14.893
SRR8316900Third green stage 43.196
SRR8316901Third green stage 43.288
SRR8316898Complete white stage 0.992
SRR8316899Complete white stage 11.848
SRR8316903Complete white stage 2.436
SRR8316902Silver flowering stage2.062
SRR8316904Silver flowering stage1.340
SRR8316905Silver flowering stage0.821
SRR8316906Gold flowering stage 3.506
SRR8316907Gold flowering stage 4.385
SRR8316908Gold flowering stage 4.199
SRP132670SRR6706286Control58.677
SRR6706287Light intensity 50%65.219
SRR6706288Light intensity 20%74.616
CNP0000432CNS0095592Slightly white alabastrum(diploid) 123.481
CNS0095593Slightly white alabastrum(diploid) 215.148
CNS0095594Slightly white alabastrum(diploid) 319.592
CNS0095595Whole white alabastrum(diploid) 217.973
CNS0095596Whole white alabastrum(diploid) 323.666
CNS0095597Whole white alabastrum(diploid) 49.837
CNS0095598Silvery flower (diploied) 17.805
CNS0095599Silvery flower (diploied) 25.478
CNS0095600Silvery flower (diploied) 32.983
CNS0095601Golden flower (diploid) 16.789
CNS0095602Golden flower (diploid) 24.424
CNS0095603Golden flower (diploid) 34.684
CNS0095604Slightly white alabastrum(tetraploid) 123.305
CNS0095605Slightly white alabastrum(tetraploid) 223.764
CNS0095606Slightly white alabastrum(tetraploid) 327.702
CNS0095607Whole white alabastrum(tetraploid) 111.592
CNS0095608Whole white alabastrum(tetraploid) 29.186
CNS0095609Whole white alabastrum(tetraploid) 342.542
CNS0095610Silvery flower (tetraploid) 16.902
CNS0095611Silvery flower (tetraploid) 26.333
CNS0095612Silvery flower (tetraploid) 35.108
CNS0095613Golden flower (tetraploid) 12.897
CNS0095614Golden flower (tetraploid) 26.873
CNS0095615Golden flower (tetraploid) 34.698
CRA001975CRR073297Stem 189.921
CRR073298Stem 275.623
CRR073299Stem 393.927
CRR073300Leaf 159.113
CRR073301Leaf 261.318
CRR073302Leaf 359.484
CRR073303Juvenile bud 121.895
CRR073304Juvenile bud 239.069
CRR073305Juvenile bud 314.432
CRR073306Third green 117.066
CRR073307Third green 26.368
CRR073308Third green 39.821
CRR073309Second white 13.520
CRR073310Second white 28.136
CRR073311Second white 33.785
CRR073312Silver flowering 14.678
CRR073313Silver flowering 24.361
CRR073314Silver flowering 34.024
CRR073315Gold flowering 1199.670
CRR073316Gold flowering 2297.885
CRR073317Gold flowering 3173.315
CRR073318Tawny withering 119.899
CRR073319Tawny withering 220.905
CRR073320Tawny withering 318.884