Detail information of GWHGAAZE002803


Functional Annotation

DatabaseOrthologsE valueAnnotation
NrXP_010062976.10PREDICTED: thiamine thiazole synthase 1, chloroplastic [Eucalyptus grandis]
COGYP_004290479.11E-48thiazole biosynthetic enzyme
Swissprottr|F6H9A9|THI41_VITVI0Thiamine thiazole synthase 1, chloroplastic {ECO:0000255|HAMAP-Rule:MF_03158} (Precursor)
trEMBLtr|D6N3H1|D6N3H1_GOSHI0Thiamine thiazole synthase, chloroplastic {ECO:0000256|HAMAP-Rule:MF_03158}
TAIR10AT5G54770.12E-143thiazole biosynthetic enzyme, chloroplast (ARA6) (THI1) (THI4)

Location And Transcript Sequence (JBrowse)

ScaffoldTypeStartEndStrand
GWHAAZE00000001gene8664599886648385+
GWHAAZE00000001mRNA8664599886648385+
GWHAAZE00000001exon8664599886646345+
GWHAAZE00000001exon8664694486647504+
GWHAAZE00000001exon8664822186648385+
GWHAAZE00000001CDS8664599886646345+
GWHAAZE00000001CDS8664694486647504+
GWHAAZE00000001CDS8664822186648385+
Transcript Sequence

Network for GWHGAAZE002803

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist


Functional Module

Module IDFunction Annotation


Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF01946.18Thi4743076.40E-113
Protein Sequence

Gene family

Gene familysubfamily
----

KEGG pathway

KO Enzyme pathway mapID
K03146THI4, THI1 Metabolic pathways map01100
Thiamine metabolismmap00730

Gene Ontology

GO term OntologyName
GO:0009228biological_processthiamine biosynthetic process

Expression pattern


Expression pattern detail

SRPSampleDescriptionTPM
SRP075780SRR3591705youngest leaf574.473
SRR3591706second leaf1575.068
SRR3591707mature leaf1013.590
SRR3591708Shoot apex948.755
SRR3591709Stem571.697
SRR3591710White floral bud308.092
SRR3591711White flower197.946
SRR3591712Green floral bud788.730
SRR3591713Yellow flower48.103
SRP173429 SRR8316895Juvenile bud stage 760.215
SRR8316896Juvenile bud stage 1029.752
SRR8316897Juvenile bud stage 607.783
SRR8316894Third green stage 360.816
SRR8316900Third green stage 1140.459
SRR8316901Third green stage 867.469
SRR8316898Complete white stage 71.248
SRR8316899Complete white stage 950.806
SRR8316903Complete white stage 113.170
SRR8316902Silver flowering stage15.196
SRR8316904Silver flowering stage17.362
SRR8316905Silver flowering stage12.243
SRR8316906Gold flowering stage 23.250
SRR8316907Gold flowering stage 34.032
SRR8316908Gold flowering stage 26.513
SRP132670SRR6706286Control1112.586
SRR6706287Light intensity 50%1129.710
SRR6706288Light intensity 20%1202.498
CNP0000432CNS0095592Slightly white alabastrum(diploid) 1641.015
CNS0095593Slightly white alabastrum(diploid) 2607.663
CNS0095594Slightly white alabastrum(diploid) 3656.943
CNS0095595Whole white alabastrum(diploid) 2517.370
CNS0095596Whole white alabastrum(diploid) 3583.571
CNS0095597Whole white alabastrum(diploid) 4463.979
CNS0095598Silvery flower (diploied) 1712.042
CNS0095599Silvery flower (diploied) 2665.890
CNS0095600Silvery flower (diploied) 3172.659
CNS0095601Golden flower (diploid) 1561.483
CNS0095602Golden flower (diploid) 2284.989
CNS0095603Golden flower (diploid) 3279.957
CNS0095604Slightly white alabastrum(tetraploid) 1831.172
CNS0095605Slightly white alabastrum(tetraploid) 2788.207
CNS0095606Slightly white alabastrum(tetraploid) 31105.409
CNS0095607Whole white alabastrum(tetraploid) 1482.876
CNS0095608Whole white alabastrum(tetraploid) 2457.449
CNS0095609Whole white alabastrum(tetraploid) 31113.045
CNS0095610Silvery flower (tetraploid) 178.916
CNS0095611Silvery flower (tetraploid) 2230.933
CNS0095612Silvery flower (tetraploid) 378.139
CNS0095613Golden flower (tetraploid) 120.895
CNS0095614Golden flower (tetraploid) 268.697
CNS0095615Golden flower (tetraploid) 35.424
CRA001975CRR073297Stem 11278.015
CRR073298Stem 21262.231
CRR073299Stem 32350.764
CRR073300Leaf 1622.231
CRR073301Leaf 2703.700
CRR073302Leaf 3946.834
CRR073303Juvenile bud 11012.358
CRR073304Juvenile bud 2452.404
CRR073305Juvenile bud 31066.436
CRR073306Third green 140.817
CRR073307Third green 277.654
CRR073308Third green 349.469
CRR073309Second white 122.362
CRR073310Second white 27.308
CRR073311Second white 33.644
CRR073312Silver flowering 13.148
CRR073313Silver flowering 24.795
CRR073314Silver flowering 34.947
CRR073315Gold flowering 12568.407
CRR073316Gold flowering 22531.823
CRR073317Gold flowering 33706.197
CRR073318Tawny withering 1342.767
CRR073319Tawny withering 2217.528
CRR073320Tawny withering 3280.825