Detail information of GWHGAAZE002834


Functional Annotation

DatabaseOrthologsE valueAnnotation
NrXP_004241898.17.4563E-144PREDICTED: glycylpeptide N-tetradecanoyltransferase 1-like [Solanum lycopersicum]
Swissprottr|Q9LTR9|NMT1_ARATH9E-134Glycylpeptide N-tetradecanoyltransferase 1
trEMBLtr|K4C712|K4C712_SOLLC3E-144Glycylpeptide N-tetradecanoyltransferase {ECO:0000256|RuleBase:RU000586}
TAIR10AT5G57020.12E-105myristoyl-CoA:protein N-myristoyltransferase

Location And Transcript Sequence (JBrowse)

ScaffoldTypeStartEndStrand
GWHAAZE00000001gene8711345187114625-
GWHAAZE00000001mRNA8711345187114625-
GWHAAZE00000001exon8711444987114625-
GWHAAZE00000001exon8711345187114174-
GWHAAZE00000001five_prime_UTR8711444987114625-
GWHAAZE00000001five_prime_UTR8711415687114174-
GWHAAZE00000001CDS8711345187114155-
Transcript Sequence

Network for GWHGAAZE002834

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist


Functional Module

Module IDFunction Annotation
CFinderModule0126


Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF01233.20NMT732321.00E-78
Protein Sequence

Gene family

Gene familysubfamily
----

KEGG pathway

KO Enzyme pathway mapID
--------

Gene Ontology

GO term OntologyName
GO:0004379molecular_functionglycylpeptide N-tetradecanoyltransferase activity

Expression pattern


Expression pattern detail

SRPSampleDescriptionTPM
SRP075780SRR3591705youngest leaf24.474
SRR3591706second leaf17.355
SRR3591707mature leaf11.058
SRR3591708Shoot apex22.071
SRR3591709Stem20.224
SRR3591710White floral bud30.474
SRR3591711White flower28.254
SRR3591712Green floral bud32.725
SRR3591713Yellow flower25.017
SRP173429 SRR8316895Juvenile bud stage 15.292
SRR8316896Juvenile bud stage 20.607
SRR8316897Juvenile bud stage 8.505
SRR8316894Third green stage 10.760
SRR8316900Third green stage 35.552
SRR8316901Third green stage 28.828
SRR8316898Complete white stage 10.241
SRR8316899Complete white stage 27.158
SRR8316903Complete white stage 21.147
SRR8316902Silver flowering stage9.593
SRR8316904Silver flowering stage15.413
SRR8316905Silver flowering stage7.658
SRR8316906Gold flowering stage 25.806
SRR8316907Gold flowering stage 22.412
SRR8316908Gold flowering stage 27.673
SRP132670SRR6706286Control26.391
SRR6706287Light intensity 50%24.642
SRR6706288Light intensity 20%27.165
CNP0000432CNS0095592Slightly white alabastrum(diploid) 115.273
CNS0095593Slightly white alabastrum(diploid) 215.605
CNS0095594Slightly white alabastrum(diploid) 314.700
CNS0095595Whole white alabastrum(diploid) 216.745
CNS0095596Whole white alabastrum(diploid) 321.627
CNS0095597Whole white alabastrum(diploid) 423.750
CNS0095598Silvery flower (diploied) 113.304
CNS0095599Silvery flower (diploied) 210.296
CNS0095600Silvery flower (diploied) 326.901
CNS0095601Golden flower (diploid) 112.801
CNS0095602Golden flower (diploid) 230.309
CNS0095603Golden flower (diploid) 326.134
CNS0095604Slightly white alabastrum(tetraploid) 128.422
CNS0095605Slightly white alabastrum(tetraploid) 222.528
CNS0095606Slightly white alabastrum(tetraploid) 329.414
CNS0095607Whole white alabastrum(tetraploid) 127.961
CNS0095608Whole white alabastrum(tetraploid) 226.102
CNS0095609Whole white alabastrum(tetraploid) 334.963
CNS0095610Silvery flower (tetraploid) 126.400
CNS0095611Silvery flower (tetraploid) 232.050
CNS0095612Silvery flower (tetraploid) 324.528
CNS0095613Golden flower (tetraploid) 114.473
CNS0095614Golden flower (tetraploid) 230.961
CNS0095615Golden flower (tetraploid) 335.218
CRA001975CRR073297Stem 129.657
CRR073298Stem 231.321
CRR073299Stem 337.844
CRR073300Leaf 145.002
CRR073301Leaf 237.480
CRR073302Leaf 340.147
CRR073303Juvenile bud 134.523
CRR073304Juvenile bud 234.224
CRR073305Juvenile bud 341.421
CRR073306Third green 125.708
CRR073307Third green 226.037
CRR073308Third green 330.339
CRR073309Second white 133.059
CRR073310Second white 223.847
CRR073311Second white 328.836
CRR073312Silver flowering 131.641
CRR073313Silver flowering 236.691
CRR073314Silver flowering 327.678
CRR073315Gold flowering 110.807
CRR073316Gold flowering 213.678
CRR073317Gold flowering 313.798
CRR073318Tawny withering 125.875
CRR073319Tawny withering 223.517
CRR073320Tawny withering 331.206