Detail information of GWHGAAZE002841


Functional Annotation

DatabaseOrthologsE valueAnnotation
NrXP_002522947.11.151E-1481-acyl-sn-glycerol-3-phosphate acyltransferase, putative [Ricinus communis]
COGYP_004369871.11E-281-acyl-sn-glycerol-3-phosphate acyltransferase
Swissprottr|Q42670|PLSC_COCNU2E-1261-acyl-sn-glycerol-3-phosphate acyltransferase
trEMBLtr|B9SAC8|B9SAC8_RICCO4E-1491-acyl-sn-glycerol-3-phosphate acyltransferase, putative {ECO:0000313|EMBL:EEF39377.1}
TAIR10AT4G30580.12E-12Phospholipid/glycerol acyltransferase family protein

Location And Transcript Sequence (JBrowse)

ScaffoldTypeStartEndStrand
GWHAAZE00000001gene8719280087195324-
GWHAAZE00000001mRNA8719280087195324-
GWHAAZE00000001exon8719280087193060-
GWHAAZE00000001exon8719315387193245-
GWHAAZE00000001exon8719333487193449-
GWHAAZE00000001exon8719354887193698-
GWHAAZE00000001exon8719499587195324-
GWHAAZE00000001CDS8719499587195324-
GWHAAZE00000001CDS8719354887193698-
GWHAAZE00000001CDS8719333487193449-
GWHAAZE00000001CDS8719315387193245-
GWHAAZE00000001CDS8719280087193060-
Transcript Sequence

Network for GWHGAAZE002841

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist


Functional Module

Module IDFunction Annotation


Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF01553.22Acyltransferase1182483.20E-25
Protein Sequence

Gene family

Gene familysubfamily
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KEGG pathway

KO Enzyme pathway mapID
K13509AGPAT1_2 Metabolic pathways map01100
Biosynthesis of secondary metabolitesmap01110
Glycerolipid metabolismmap00561
Glycerophospholipid metabolismmap00564
Phospholipase D signaling pathwaymap04072
Fat digestion and absorptionmap04975

Gene Ontology

GO term OntologyName
GO:0016746molecular_functiontransferase activity, transferring acyl groups

Expression pattern


Expression pattern detail

SRPSampleDescriptionTPM
SRP075780SRR3591705youngest leaf1.308
SRR3591706second leaf0.142
SRR3591707mature leaf2.141
SRR3591708Shoot apex0.606
SRR3591709Stem3.469
SRR3591710White floral bud5.667
SRR3591711White flower10.755
SRR3591712Green floral bud1.869
SRR3591713Yellow flower11.738
SRP173429 SRR8316895Juvenile bud stage 0.479
SRR8316896Juvenile bud stage 0.459
SRR8316897Juvenile bud stage 0.217
SRR8316894Third green stage 0.000
SRR8316900Third green stage 0.451
SRR8316901Third green stage 0.344
SRR8316898Complete white stage 3.075
SRR8316899Complete white stage 1.465
SRR8316903Complete white stage 4.502
SRR8316902Silver flowering stage5.324
SRR8316904Silver flowering stage6.442
SRR8316905Silver flowering stage2.869
SRR8316906Gold flowering stage 11.343
SRR8316907Gold flowering stage 5.482
SRR8316908Gold flowering stage 17.148
SRP132670SRR6706286Control2.119
SRR6706287Light intensity 50%1.435
SRR6706288Light intensity 20%1.124
CNP0000432CNS0095592Slightly white alabastrum(diploid) 10.696
CNS0095593Slightly white alabastrum(diploid) 20.675
CNS0095594Slightly white alabastrum(diploid) 30.394
CNS0095595Whole white alabastrum(diploid) 21.523
CNS0095596Whole white alabastrum(diploid) 30.218
CNS0095597Whole white alabastrum(diploid) 40.832
CNS0095598Silvery flower (diploied) 13.670
CNS0095599Silvery flower (diploied) 28.338
CNS0095600Silvery flower (diploied) 314.566
CNS0095601Golden flower (diploid) 17.245
CNS0095602Golden flower (diploid) 29.064
CNS0095603Golden flower (diploid) 37.908
CNS0095604Slightly white alabastrum(tetraploid) 10.884
CNS0095605Slightly white alabastrum(tetraploid) 20.561
CNS0095606Slightly white alabastrum(tetraploid) 32.826
CNS0095607Whole white alabastrum(tetraploid) 11.021
CNS0095608Whole white alabastrum(tetraploid) 20.225
CNS0095609Whole white alabastrum(tetraploid) 31.086
CNS0095610Silvery flower (tetraploid) 136.988
CNS0095611Silvery flower (tetraploid) 242.431
CNS0095612Silvery flower (tetraploid) 345.431
CNS0095613Golden flower (tetraploid) 145.237
CNS0095614Golden flower (tetraploid) 243.033
CNS0095615Golden flower (tetraploid) 334.465
CRA001975CRR073297Stem 10.354
CRR073298Stem 20.117
CRR073299Stem 30.472
CRR073300Leaf 10.737
CRR073301Leaf 20.092
CRR073302Leaf 30.160
CRR073303Juvenile bud 10.811
CRR073304Juvenile bud 20.495
CRR073305Juvenile bud 30.487
CRR073306Third green 110.296
CRR073307Third green 213.096
CRR073308Third green 311.328
CRR073309Second white 19.125
CRR073310Second white 218.158
CRR073311Second white 39.914
CRR073312Silver flowering 111.654
CRR073313Silver flowering 210.657
CRR073314Silver flowering 38.882
CRR073315Gold flowering 11.506
CRR073316Gold flowering 22.483
CRR073317Gold flowering 31.083
CRR073318Tawny withering 13.038
CRR073319Tawny withering 22.389
CRR073320Tawny withering 32.149