Detail information of GWHGAAZE002848


Functional Annotation

DatabaseOrthologsE valueAnnotation
NrACV93249.12.75183E-70CI small heat shock protein 2 [Prunus salicina]
COGYP_005887446.12E-27heat shock protein Hsp20
Swissprottr|P02519|HSP11_SOYBN3E-6517.3 kDa class I heat shock protein
trEMBLtr|C9EIM4|C9EIM4_9ROSA1E-70CI small heat shock protein 2 {ECO:0000313|EMBL:ACV93249.1}
TAIR10AT5G59720.12E-39heat shock protein 18.2

Location And Transcript Sequence (JBrowse)

ScaffoldTypeStartEndStrand
GWHAAZE00000001gene8728936787289744+
GWHAAZE00000001mRNA8728936787289744+
GWHAAZE00000001exon8728936787289744+
GWHAAZE00000001CDS8728936787289744+
Transcript Sequence

Network for GWHGAAZE002848

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist


Functional Module

Module IDFunction Annotation


Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF00011.22HSP20211248.30E-33
Protein Sequence

Gene family

Gene familysubfamily
----

KEGG pathway

KO Enzyme pathway mapID
K13993HSP20 Protein processing in endoplasmic reticulum map04141

Gene Ontology

GO term OntologyName

Expression pattern


Expression pattern detail

SRPSampleDescriptionTPM
SRP075780SRR3591705youngest leaf118.243
SRR3591706second leaf12.575
SRR3591707mature leaf16.522
SRR3591708Shoot apex30.154
SRR3591709Stem269.485
SRR3591710White floral bud16.010
SRR3591711White flower20.739
SRR3591712Green floral bud24.442
SRR3591713Yellow flower4.293
SRP173429 SRR8316895Juvenile bud stage 154.633
SRR8316896Juvenile bud stage 423.780
SRR8316897Juvenile bud stage 165.650
SRR8316894Third green stage 7.858
SRR8316900Third green stage 20.618
SRR8316901Third green stage 28.832
SRR8316898Complete white stage 2.884
SRR8316899Complete white stage 17.756
SRR8316903Complete white stage 4.616
SRR8316902Silver flowering stage1.892
SRR8316904Silver flowering stage1.281
SRR8316905Silver flowering stage0.922
SRR8316906Gold flowering stage 12.226
SRR8316907Gold flowering stage 6.530
SRR8316908Gold flowering stage 7.968
SRP132670SRR6706286Control23.656
SRR6706287Light intensity 50%15.738
SRR6706288Light intensity 20%16.682
CNP0000432CNS0095592Slightly white alabastrum(diploid) 124.982
CNS0095593Slightly white alabastrum(diploid) 229.989
CNS0095594Slightly white alabastrum(diploid) 320.023
CNS0095595Whole white alabastrum(diploid) 229.391
CNS0095596Whole white alabastrum(diploid) 312.113
CNS0095597Whole white alabastrum(diploid) 416.300
CNS0095598Silvery flower (diploied) 120.448
CNS0095599Silvery flower (diploied) 2472.005
CNS0095600Silvery flower (diploied) 3149.309
CNS0095601Golden flower (diploid) 1868.302
CNS0095602Golden flower (diploid) 2196.918
CNS0095603Golden flower (diploid) 3201.389
CNS0095604Slightly white alabastrum(tetraploid) 125.545
CNS0095605Slightly white alabastrum(tetraploid) 228.001
CNS0095606Slightly white alabastrum(tetraploid) 334.682
CNS0095607Whole white alabastrum(tetraploid) 128.559
CNS0095608Whole white alabastrum(tetraploid) 212.597
CNS0095609Whole white alabastrum(tetraploid) 315.125
CNS0095610Silvery flower (tetraploid) 117.173
CNS0095611Silvery flower (tetraploid) 216.073
CNS0095612Silvery flower (tetraploid) 36.754
CNS0095613Golden flower (tetraploid) 18.631
CNS0095614Golden flower (tetraploid) 22.787
CNS0095615Golden flower (tetraploid) 30.518
CRA001975CRR073297Stem 15.143
CRR073298Stem 28.386
CRR073299Stem 35.338
CRR073300Leaf 17.568
CRR073301Leaf 211.059
CRR073302Leaf 38.059
CRR073303Juvenile bud 110.228
CRR073304Juvenile bud 22.931
CRR073305Juvenile bud 311.495
CRR073306Third green 10.717
CRR073307Third green 22.681
CRR073308Third green 31.968
CRR073309Second white 12.089
CRR073310Second white 20.381
CRR073311Second white 30.426
CRR073312Silver flowering 10.000
CRR073313Silver flowering 20.101
CRR073314Silver flowering 30.391
CRR073315Gold flowering 18.153
CRR073316Gold flowering 221.736
CRR073317Gold flowering 313.677
CRR073318Tawny withering 114.555
CRR073319Tawny withering 25.261
CRR073320Tawny withering 316.451