Detail information of GWHGAAZE002914


Functional Annotation

DatabaseOrthologsE valueAnnotation
NrXP_002529051.10Chitin-inducible gibberellin-responsive protein, putative [Ricinus communis]
Swissprottr|Q8H125|SCL5_ARATH0Scarecrow-like protein 5
trEMBLtr|B9SST2|B9SST2_RICCO0Chitin-inducible gibberellin-responsive protein, putative {ECO:0000313|EMBL:EEF33362.1}
TAIR10AT1G50600.14E-173scarecrow-like 5

Location And Transcript Sequence (JBrowse)

ScaffoldTypeStartEndStrand
GWHAAZE00000001gene8847890588480038-
GWHAAZE00000001mRNA8847890588480038-
GWHAAZE00000001exon8847890588480038-
GWHAAZE00000001CDS8847890588480038-
Transcript Sequence

Network for GWHGAAZE002914

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist


Functional Module

Module IDFunction Annotation


Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF03514.15GRAS93772.40E-133
Protein Sequence

Gene family

Gene familysubfamily
Transcription Factors FamilyGRAS

KEGG pathway

KO Enzyme pathway mapID
--------

Gene Ontology

GO term OntologyName

Expression pattern


Expression pattern detail

SRPSampleDescriptionTPM
SRP075780SRR3591705youngest leaf147.078
SRR3591706second leaf58.084
SRR3591707mature leaf71.379
SRR3591708Shoot apex62.887
SRR3591709Stem194.274
SRR3591710White floral bud118.965
SRR3591711White flower164.718
SRR3591712Green floral bud67.053
SRR3591713Yellow flower77.205
SRP173429 SRR8316895Juvenile bud stage 202.205
SRR8316896Juvenile bud stage 117.109
SRR8316897Juvenile bud stage 198.994
SRR8316894Third green stage 40.786
SRR8316900Third green stage 76.326
SRR8316901Third green stage 108.410
SRR8316898Complete white stage 29.938
SRR8316899Complete white stage 221.871
SRR8316903Complete white stage 43.119
SRR8316902Silver flowering stage32.139
SRR8316904Silver flowering stage42.610
SRR8316905Silver flowering stage23.798
SRR8316906Gold flowering stage 60.617
SRR8316907Gold flowering stage 53.176
SRR8316908Gold flowering stage 67.858
SRP132670SRR6706286Control45.960
SRR6706287Light intensity 50%52.868
SRR6706288Light intensity 20%45.681
CNP0000432CNS0095592Slightly white alabastrum(diploid) 1227.442
CNS0095593Slightly white alabastrum(diploid) 2274.967
CNS0095594Slightly white alabastrum(diploid) 3258.185
CNS0095595Whole white alabastrum(diploid) 2187.106
CNS0095596Whole white alabastrum(diploid) 338.581
CNS0095597Whole white alabastrum(diploid) 4128.750
CNS0095598Silvery flower (diploied) 1401.255
CNS0095599Silvery flower (diploied) 2402.174
CNS0095600Silvery flower (diploied) 3225.351
CNS0095601Golden flower (diploid) 1502.189
CNS0095602Golden flower (diploid) 2379.496
CNS0095603Golden flower (diploid) 3367.419
CNS0095604Slightly white alabastrum(tetraploid) 126.206
CNS0095605Slightly white alabastrum(tetraploid) 223.121
CNS0095606Slightly white alabastrum(tetraploid) 347.469
CNS0095607Whole white alabastrum(tetraploid) 122.467
CNS0095608Whole white alabastrum(tetraploid) 216.850
CNS0095609Whole white alabastrum(tetraploid) 330.603
CNS0095610Silvery flower (tetraploid) 187.862
CNS0095611Silvery flower (tetraploid) 279.141
CNS0095612Silvery flower (tetraploid) 380.320
CNS0095613Golden flower (tetraploid) 163.572
CNS0095614Golden flower (tetraploid) 284.644
CNS0095615Golden flower (tetraploid) 374.620
CRA001975CRR073297Stem 185.459
CRR073298Stem 281.471
CRR073299Stem 385.124
CRR073300Leaf 1111.526
CRR073301Leaf 2148.161
CRR073302Leaf 382.649
CRR073303Juvenile bud 1106.832
CRR073304Juvenile bud 2136.866
CRR073305Juvenile bud 3172.290
CRR073306Third green 1119.009
CRR073307Third green 290.399
CRR073308Third green 3115.927
CRR073309Second white 153.187
CRR073310Second white 262.846
CRR073311Second white 347.846
CRR073312Silver flowering 1102.592
CRR073313Silver flowering 283.232
CRR073314Silver flowering 366.945
CRR073315Gold flowering 198.750
CRR073316Gold flowering 2134.614
CRR073317Gold flowering 3143.794
CRR073318Tawny withering 167.373
CRR073319Tawny withering 2203.361
CRR073320Tawny withering 392.217