Gene detail

Detail information of GWHGAAZE002944

Functional Annotation

Database	Orthologs	E value	Annotation
Nr	XP_010644580.1	5.9064E-130	PREDICTED: nicotinamide mononucleotide adenylyltransferase isoform X3 [Vitis vinifera]
COG	YP_003673546.1	7E-10	nicotinate (nicotinamide) nucleotide adenylyltransferase
Swissprot	tr\|F4K687\|NMNAT_ARATH	3E-113	Nicotinamide mononucleotide adenylyltransferase
trEMBL	tr\|G7KEH1\|G7KEH1_MEDTR	8E-128	Nicotinamide mononucleotide adenylyltransferase, putative {ECO:0000313\|EMBL:AET00792.2}
TAIR10	AT5G55810.1	1E-90	nicotinate/nicotinamide mononucleotide adenyltransferase

Location And Transcript Sequence (JBrowse)

Scaffold	Type	Start	End	Strand
GWHAAZE00000001	gene	89025675	89030620	-
GWHAAZE00000001	mRNA	89025675	89030620	-
GWHAAZE00000001	exon	89025675	89026120	-
GWHAAZE00000001	exon	89026220	89026278	-
GWHAAZE00000001	exon	89026922	89027023	-
GWHAAZE00000001	exon	89027346	89027425	-
GWHAAZE00000001	exon	89027775	89027859	-
GWHAAZE00000001	exon	89027964	89028032	-
GWHAAZE00000001	exon	89028339	89028424	-
GWHAAZE00000001	exon	89029906	89029979	-
GWHAAZE00000001	exon	89030542	89030620	-
GWHAAZE00000001	five_prime_UTR	89030619	89030620	-
GWHAAZE00000001	CDS	89030542	89030618	-
GWHAAZE00000001	CDS	89029906	89029979	-
GWHAAZE00000001	CDS	89028339	89028424	-
GWHAAZE00000001	CDS	89027964	89028032	-
GWHAAZE00000001	CDS	89027775	89027859	-
GWHAAZE00000001	CDS	89027346	89027425	-
GWHAAZE00000001	CDS	89026922	89027023	-
GWHAAZE00000001	CDS	89026220	89026278	-
GWHAAZE00000001	CDS	89026018	89026120	-
GWHAAZE00000001	three_prime_UTR	89025675	89026017	-

Transcript Sequence
>GWHTAAZE002948 ATATGGATATTGCCTTGCCCCTAGATAAATTATCTCTGGGATATACAGACGATGACGGTTCACGAGATGTTAAAACCAAGGGAAAAATGCATGTCATTTTAGTATCAACTGGAAGTTTCAATCCTCCTACATATATGCACTTGCGTCTTTTTGAGCTGGCAAGAGATGCACTAAATTCAGAGGGATTTTCGGTCATTGGAGGTTACATGTCACCTGTAAATGACGCATACAAGAAAAGGGGTCTTATATCGGCTGAACATCGTAGTGCCATGTGTCACCTGGCTTGCAAAAGTTCTGAATTCATAATGGCTAAGCAGAGTTCCTTTCAACGCACATTGACCGTCTTATCCAGAATCAGGAGTTTTGTGTGTGATAATGGACTAATATCCAGCGAATCCGTTAAGGTCATGCTTATATGTGGTTCTGACCTGCTAGAATCTTTTGGCATTCCTGGAGCTTGGATTCGTGACCAGGTGAGAAGTATATGCAGAGACTACGGCATGGTTTGTATTCGTAGAGAAGGCCAAGATGTTGAGAAAATTATCTCTTCTGACAACATTTTGAACGAGTACAAGAGTAACATCAAAGTTGTGGATGAATTAGTACCAAACCAAATCAGTTCAACGCGCATGAGGGACTGCATTTCAAGAGGGTTGTCAGTGAAATATTTGACAGCAGATGAAGTGATTGACTATATCAAACAACACCATTTGTACTCGAGTTCAGCTTCACAATGACGATTGGATGGTCAGCATGTTTCTGAATTCGGGCTAGGATTCCTTAATGAGGCCCCGATTTGTATGTTGCACATTATTTATGCTGTTTGCACTATATTTGGCACAAAACCACGTTCTGCATCTATCACCATTGCCTGCAGCCGAGATGACTTCTGACCAAAACTCCCGGTTTCTCTAATTTTTGATGTTACATATACTTGTGCTGCTACAAATGGATGGTGAAAAAGTTAATAGCAAAAAAAGGGGATAATTATATAAAATCACATAGGGAGAACAGATGCAAAACATTGTTTCATGAATATTGTTATTGGGTTAGTCTCCTCTGTGAGATGAAAAATAATCA

Network for GWHGAAZE002944

Network category	Network	Top300 PCC genelist
Coexpression Positive	Network	Top300 PCC genelist
Coexpression Negative	Network	Top300 PCC genelist

Functional Module

Module ID	Function Annotation

Protein Structure

Pfam accession	Pfam name	Alignment start	Alignment end	E-value
PF01467.27	CTP_transf_like	36	211	2.00E-23

Protein Sequence

Gene family

Gene family	subfamily
--	--

KEGG pathway

KO	Enzyme	pathway	mapID
K06210	NMNAT	Metabolic pathways	map01100
K06210	NMNAT	Nicotinate and nicotinamide metabolism	map00760

Gene Ontology

GO term	Ontology	Name
GO:0009058	biological_process	biosynthetic process
GO:0009435	biological_process	NAD biosynthetic process
GO:0003824	molecular_function	catalytic activity
GO:0016779	molecular_function	nucleotidyltransferase activity

Expression pattern

Expression pattern detail

SRP	Sample	Description	TPM
SRP075780	SRR3591705	youngest leaf	24.220
	SRR3591706	second leaf	16.454
	SRR3591707	mature leaf	15.162
	SRR3591708	Shoot apex	24.591
	SRR3591709	Stem	33.508
	SRR3591710	White floral bud	23.866
	SRR3591711	White flower	27.890
	SRR3591712	Green floral bud	22.477
	SRR3591713	Yellow flower	35.063
SRP173429	SRR8316895	Juvenile bud stage	42.192
	SRR8316896	Juvenile bud stage	54.917
	SRR8316897	Juvenile bud stage	66.498
	SRR8316894	Third green stage	7.508
	SRR8316900	Third green stage	16.704
	SRR8316901	Third green stage	26.894
	SRR8316898	Complete white stage	6.393
	SRR8316899	Complete white stage	36.090
	SRR8316903	Complete white stage	12.210
	SRR8316902	Silver flowering stage	9.161
	SRR8316904	Silver flowering stage	11.277
	SRR8316905	Silver flowering stage	4.608
	SRR8316906	Gold flowering stage	17.316
	SRR8316907	Gold flowering stage	17.289
	SRR8316908	Gold flowering stage	18.043
SRP132670	SRR6706286	Control	10.050
	SRR6706287	Light intensity 50%	11.185
	SRR6706288	Light intensity 20%	11.842
CNP0000432	CNS0095592	Slightly white alabastrum(diploid) 1	39.280
	CNS0095593	Slightly white alabastrum(diploid) 2	55.108
	CNS0095594	Slightly white alabastrum(diploid) 3	55.084
	CNS0095595	Whole white alabastrum(diploid) 2	49.613
	CNS0095596	Whole white alabastrum(diploid) 3	18.196
	CNS0095597	Whole white alabastrum(diploid) 4	29.404
	CNS0095598	Silvery flower (diploied) 1	63.264
	CNS0095599	Silvery flower (diploied) 2	65.889
	CNS0095600	Silvery flower (diploied) 3	29.130
	CNS0095601	Golden flower (diploid) 1	59.451
	CNS0095602	Golden flower (diploid) 2	38.726
	CNS0095603	Golden flower (diploid) 3	37.620
	CNS0095604	Slightly white alabastrum(tetraploid) 1	15.861
	CNS0095605	Slightly white alabastrum(tetraploid) 2	16.702
	CNS0095606	Slightly white alabastrum(tetraploid) 3	18.737
	CNS0095607	Whole white alabastrum(tetraploid) 1	12.426
	CNS0095608	Whole white alabastrum(tetraploid) 2	11.365
	CNS0095609	Whole white alabastrum(tetraploid) 3	15.855
	CNS0095610	Silvery flower (tetraploid) 1	19.475
	CNS0095611	Silvery flower (tetraploid) 2	18.127
	CNS0095612	Silvery flower (tetraploid) 3	17.549
	CNS0095613	Golden flower (tetraploid) 1	15.254
	CNS0095614	Golden flower (tetraploid) 2	21.390
	CNS0095615	Golden flower (tetraploid) 3	10.361
CRA001975	CRR073297	Stem 1	11.550
	CRR073298	Stem 2	11.342
	CRR073299	Stem 3	5.859
	CRR073300	Leaf 1	13.477
	CRR073301	Leaf 2	13.794
	CRR073302	Leaf 3	8.036
	CRR073303	Juvenile bud 1	10.130
	CRR073304	Juvenile bud 2	5.257
	CRR073305	Juvenile bud 3	8.533
	CRR073306	Third green 1	2.703
	CRR073307	Third green 2	1.833
	CRR073308	Third green 3	2.427
	CRR073309	Second white 1	10.171
	CRR073310	Second white 2	9.528
	CRR073311	Second white 3	6.076
	CRR073312	Silver flowering 1	3.650
	CRR073313	Silver flowering 2	3.178
	CRR073314	Silver flowering 3	3.686
	CRR073315	Gold flowering 1	10.244
	CRR073316	Gold flowering 2	12.860
	CRR073317	Gold flowering 3	6.691
	CRR073318	Tawny withering 1	13.182
	CRR073319	Tawny withering 2	26.706
	CRR073320	Tawny withering 3	11.330