Detail information of GWHGAAZE002975


Functional Annotation

DatabaseOrthologsE valueAnnotation
NrAGU99972.10HSP90 [Populus tomentosa]
COGYP_003956340.10chaperone protein HtpG
Swissprottr|P36181|HSP80_SOLLC0Heat shock cognate protein 80
trEMBLtr|T2AUM9|T2AUM9_POPTO0HSP90 {ECO:0000313|EMBL:AGU99972.1}
TAIR10AT5G56030.10heat shock protein 81-2

Location And Transcript Sequence (JBrowse)

ScaffoldTypeStartEndStrand
GWHAAZE00000001gene8948532189488791-
GWHAAZE00000001mRNA8948532189488791-
GWHAAZE00000001exon8948532189487161-
GWHAAZE00000001exon8948725389487394-
GWHAAZE00000001exon8948866989488791-
GWHAAZE00000001CDS8948866989488791-
GWHAAZE00000001CDS8948725389487394-
GWHAAZE00000001CDS8948532189487161-
Transcript Sequence

Network for GWHGAAZE002975

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist


Functional Module

Module IDFunction Annotation


Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF02518.27HATPase_c271813.70E-14
PF00183.19HSP901846881.10E-233
Protein Sequence

Gene family

Gene familysubfamily
----

KEGG pathway

KO Enzyme pathway mapID
K04079HSP90A, htpG Protein processing in endoplasmic reticulum map04141
PI3K-Akt signaling pathwaymap04151
Necroptosismap04217
NOD-like receptor signaling pathwaymap04621
Antigen processing and presentationmap04612
Th17 cell differentiationmap04659
IL-17 signaling pathwaymap04657
Estrogen signaling pathwaymap04915
Progesterone-mediated oocyte maturationmap04914
Plant-pathogen interactionmap04626

Gene Ontology

GO term OntologyName
GO:0006457biological_processprotein folding
GO:0005524molecular_functionATP binding
GO:0051082molecular_functionunfolded protein binding

Expression pattern


Expression pattern detail

SRPSampleDescriptionTPM
SRP075780SRR3591705youngest leaf362.505
SRR3591706second leaf153.441
SRR3591707mature leaf190.293
SRR3591708Shoot apex349.339
SRR3591709Stem254.689
SRR3591710White floral bud213.136
SRR3591711White flower158.016
SRR3591712Green floral bud438.013
SRR3591713Yellow flower97.520
SRP173429 SRR8316895Juvenile bud stage 567.315
SRR8316896Juvenile bud stage 918.921
SRR8316897Juvenile bud stage 455.623
SRR8316894Third green stage 275.571
SRR8316900Third green stage 835.221
SRR8316901Third green stage 925.750
SRR8316898Complete white stage 122.431
SRR8316899Complete white stage 741.060
SRR8316903Complete white stage 269.114
SRR8316902Silver flowering stage122.835
SRR8316904Silver flowering stage185.266
SRR8316905Silver flowering stage124.384
SRR8316906Gold flowering stage 298.762
SRR8316907Gold flowering stage 286.742
SRR8316908Gold flowering stage 215.809
SRP132670SRR6706286Control437.693
SRR6706287Light intensity 50%451.432
SRR6706288Light intensity 20%451.179
CNP0000432CNS0095592Slightly white alabastrum(diploid) 1350.615
CNS0095593Slightly white alabastrum(diploid) 2444.620
CNS0095594Slightly white alabastrum(diploid) 3353.260
CNS0095595Whole white alabastrum(diploid) 2306.334
CNS0095596Whole white alabastrum(diploid) 3246.363
CNS0095597Whole white alabastrum(diploid) 4278.606
CNS0095598Silvery flower (diploied) 1232.171
CNS0095599Silvery flower (diploied) 2572.407
CNS0095600Silvery flower (diploied) 3483.357
CNS0095601Golden flower (diploid) 1665.586
CNS0095602Golden flower (diploid) 2507.117
CNS0095603Golden flower (diploid) 3505.512
CNS0095604Slightly white alabastrum(tetraploid) 1364.854
CNS0095605Slightly white alabastrum(tetraploid) 2303.759
CNS0095606Slightly white alabastrum(tetraploid) 3704.022
CNS0095607Whole white alabastrum(tetraploid) 1178.537
CNS0095608Whole white alabastrum(tetraploid) 2164.240
CNS0095609Whole white alabastrum(tetraploid) 3445.573
CNS0095610Silvery flower (tetraploid) 1154.906
CNS0095611Silvery flower (tetraploid) 2241.324
CNS0095612Silvery flower (tetraploid) 3225.284
CNS0095613Golden flower (tetraploid) 1128.097
CNS0095614Golden flower (tetraploid) 2152.667
CNS0095615Golden flower (tetraploid) 379.204
CRA001975CRR073297Stem 1243.218
CRR073298Stem 2269.819
CRR073299Stem 3268.748
CRR073300Leaf 1389.895
CRR073301Leaf 2358.051
CRR073302Leaf 3300.326
CRR073303Juvenile bud 1358.174
CRR073304Juvenile bud 2264.202
CRR073305Juvenile bud 3450.222
CRR073306Third green 1386.329
CRR073307Third green 2191.631
CRR073308Third green 3273.587
CRR073309Second white 1509.235
CRR073310Second white 2309.520
CRR073311Second white 3416.481
CRR073312Silver flowering 1260.061
CRR073313Silver flowering 2251.836
CRR073314Silver flowering 3167.878
CRR073315Gold flowering 1163.897
CRR073316Gold flowering 2176.562
CRR073317Gold flowering 3162.631
CRR073318Tawny withering 1332.158
CRR073319Tawny withering 2299.767
CRR073320Tawny withering 3404.434