Gene detail

Detail information of GWHGAAZE003114

Functional Annotation

Database	Orthologs	E value	Annotation
Nr	ACO40494.1	5.30575E-47	14-3-3 protein [Vitis vinifera]
Swissprot	tr\|P93206\|14331_SOLLC	4E-46	14-3-3 protein 1
trEMBL	tr\|C1KG73\|C1KG73_VITVI	2E-47	14-3-3 protein {ECO:0000313\|EMBL:ACO40494.1}
TAIR10	AT5G65430.1	2E-25	general regulatory factor 8

Location And Transcript Sequence (JBrowse)

Scaffold	Type	Start	End	Strand
GWHAAZE00000001	gene	92420684	92424879	+
GWHAAZE00000001	mRNA	92420684	92424879	+
GWHAAZE00000001	exon	92420684	92421232	+
GWHAAZE00000001	exon	92421963	92422111	+
GWHAAZE00000001	exon	92424090	92424165	+
GWHAAZE00000001	exon	92424817	92424879	+
GWHAAZE00000001	CDS	92420684	92421232	+
GWHAAZE00000001	CDS	92421963	92422111	+
GWHAAZE00000001	CDS	92424090	92424165	+
GWHAAZE00000001	CDS	92424817	92424879	+

Transcript Sequence
>GWHTAAZE003120 ATGGCGGAAAGTAAGGTACCAGAAGATCGTCCGGGGAATTCTTCGGAGAATGTGCAGATACCGGAGAATCTCAGTAAAGAGGAGTACGTGAAAATGGCGAAGGCCGCCAAGGAAGAGAAGCGATTCAAAGATATGGTCAAAATAATGGAGAAGGTCGTTGTTGGACTGAGTGAGACCGAGGAACTCACCGTCGAGGAGAGGGAACTCTTCGCCGTCGCCTACAAGACAGTTTTCTTCACTCTCCAAACCGTCTGGCTCAAAGTCTCCAAGGAGGAGGAAATCGCGGACCAACTCGAGGACAAAACCGAGGTATTGAAGTTGAGGGACACAATGTTCGAGATCGAGGCTGAGATAACGGAGTTATTCGATGACGGAATTCTGAAGCTGTTGAAGGATAAACTGGAGCCGTCGGCTTCCACTAGCGAATCAAAGGTTTATTTTCTTACCTTGAGGGGCGATTGCTGTAAGCAGCTTCTAAAGTACAAGTACGGTTACGATCTTGAGAAGCTTAAGGCGGACACTATCGAAGCCTACGGCAGGGCGGCTCAGGAAATTGCAAAGGCGGATTTTCATCCAACGGATCCAACAAGGTTACGTGTGGCGCTCAGTATCTCAACCTTCTACCACGACATCCTCAATGCTTCGCGTGAAGCTTTTGATATGGCCAGAGAGGTAATGCTGCACGTCTTATTTACAGGGCACATGACCAAGCAATCTCAAAGCTGGATGGTCTGGAAGGAGAGGCGTTACAGGAAACGGAAGCCCTCCTGGAACGAAGAGGTGGAGGCGGCTAAAGAGTTCGTGAAATCATTTGCTGATGCGGATCTTCTCCGCTGA

Network for GWHGAAZE003114

Network category	Network	Top300 PCC genelist
Coexpression Positive	Network	Top300 PCC genelist
Coexpression Negative	Network	Top300 PCC genelist

Functional Module

Module ID	Function Annotation
CFinderModule0121

Protein Structure

Pfam accession	Pfam name	Alignment start	Alignment end	E-value
PF00244.21	2014/3/3	32	225	2.20E-33

Protein Sequence

Gene family

Gene family	subfamily
--	--

KEGG pathway

KO	Enzyme	pathway	mapID
K06630	YWHAE	MAPK signaling pathway - yeast	map04011
		Hippo signaling pathway	map04390
		Hippo signaling pathway - fly	map04391
		PI3K-Akt signaling pathway	map04151
		Cell cycle	map04110
		Oocyte meiosis	map04114
		NOD-like receptor signaling pathway	map04621
		Neurotrophin signaling pathway	map04722

Gene Ontology

GO term	Ontology	Name
GO:0019904	molecular_function	protein domain specific binding

Expression pattern

Expression pattern detail

SRP	Sample	Description	TPM
SRP075780	SRR3591705	youngest leaf	1.916
	SRR3591706	second leaf	1.125
	SRR3591707	mature leaf	0.174
	SRR3591708	Shoot apex	1.477
	SRR3591709	Stem	4.019
	SRR3591710	White floral bud	1.384
	SRR3591711	White flower	0.926
	SRR3591712	Green floral bud	1.480
	SRR3591713	Yellow flower	0.140
SRP173429	SRR8316895	Juvenile bud stage	3.284
	SRR8316896	Juvenile bud stage	6.410
	SRR8316897	Juvenile bud stage	1.827
	SRR8316894	Third green stage	2.091
	SRR8316900	Third green stage	2.874
	SRR8316901	Third green stage	1.818
	SRR8316898	Complete white stage	0.153
	SRR8316899	Complete white stage	1.327
	SRR8316903	Complete white stage	0.064
	SRR8316902	Silver flowering stage	0.000
	SRR8316904	Silver flowering stage	0.000
	SRR8316905	Silver flowering stage	0.021
	SRR8316906	Gold flowering stage	0.131
	SRR8316907	Gold flowering stage	0.000
	SRR8316908	Gold flowering stage	0.000
SRP132670	SRR6706286	Control	4.150
	SRR6706287	Light intensity 50%	4.014
	SRR6706288	Light intensity 20%	4.399
CNP0000432	CNS0095592	Slightly white alabastrum(diploid) 1	1.796
	CNS0095593	Slightly white alabastrum(diploid) 2	1.462
	CNS0095594	Slightly white alabastrum(diploid) 3	4.181
	CNS0095595	Whole white alabastrum(diploid) 2	0.817
	CNS0095596	Whole white alabastrum(diploid) 3	1.134
	CNS0095597	Whole white alabastrum(diploid) 4	3.249
	CNS0095598	Silvery flower (diploied) 1	0.874
	CNS0095599	Silvery flower (diploied) 2	0.221
	CNS0095600	Silvery flower (diploied) 3	0.783
	CNS0095601	Golden flower (diploid) 1	0.507
	CNS0095602	Golden flower (diploid) 2	1.138
	CNS0095603	Golden flower (diploid) 3	0.953
	CNS0095604	Slightly white alabastrum(tetraploid) 1	2.200
	CNS0095605	Slightly white alabastrum(tetraploid) 2	1.724
	CNS0095606	Slightly white alabastrum(tetraploid) 3	1.358
	CNS0095607	Whole white alabastrum(tetraploid) 1	0.677
	CNS0095608	Whole white alabastrum(tetraploid) 2	1.014
	CNS0095609	Whole white alabastrum(tetraploid) 3	10.457
	CNS0095610	Silvery flower (tetraploid) 1	0.255
	CNS0095611	Silvery flower (tetraploid) 2	0.589
	CNS0095612	Silvery flower (tetraploid) 3	0.564
	CNS0095613	Golden flower (tetraploid) 1	0.091
	CNS0095614	Golden flower (tetraploid) 2	0.207
	CNS0095615	Golden flower (tetraploid) 3	0.298
CRA001975	CRR073297	Stem 1	7.590
	CRR073298	Stem 2	5.055
	CRR073299	Stem 3	14.433
	CRR073300	Leaf 1	1.199
	CRR073301	Leaf 2	1.115
	CRR073302	Leaf 3	2.373
	CRR073303	Juvenile bud 1	0.052
	CRR073304	Juvenile bud 2	0.000
	CRR073305	Juvenile bud 3	0.185
	CRR073306	Third green 1	0.000
	CRR073307	Third green 2	0.129
	CRR073308	Third green 3	0.062
	CRR073309	Second white 1	0.000
	CRR073310	Second white 2	0.054
	CRR073311	Second white 3	0.000
	CRR073312	Silver flowering 1	0.000
	CRR073313	Silver flowering 2	0.000
	CRR073314	Silver flowering 3	0.000
	CRR073315	Gold flowering 1	0.000
	CRR073316	Gold flowering 2	0.012
	CRR073317	Gold flowering 3	0.000
	CRR073318	Tawny withering 1	0.000
	CRR073319	Tawny withering 2	0.000
	CRR073320	Tawny withering 3	0.000